Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_M17
         (346 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair pro...   151   2e-37
BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p pro...   151   2e-37
AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p pro...   151   2e-37
AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA...   151   2e-37
AY061517-1|AAL29065.1|  256|Drosophila melanogaster LD47064p pro...    42   2e-04
AE013599-1019|AAF58844.1|  256|Drosophila melanogaster CG1381-PA...    42   2e-04

>M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair
           protein protein.
          Length = 317

 Score =  151 bits (366), Expect = 2e-37
 Identities = 67/90 (74%), Positives = 77/90 (85%)
 Frame = +3

Query: 75  MGREDNATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 254
           M RE+ A WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1   MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60

Query: 255 MRKAINDHLETNPALEKLLPHINGNVGFVF 344
           MRKAI  HLE NP LEKLLPHI GNVGFVF
Sbjct: 61  MRKAIRGHLENNPQLEKLLPHIKGNVGFVF 90


>BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p
           protein.
          Length = 317

 Score =  151 bits (366), Expect = 2e-37
 Identities = 67/90 (74%), Positives = 77/90 (85%)
 Frame = +3

Query: 75  MGREDNATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 254
           M RE+ A WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1   MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60

Query: 255 MRKAINDHLETNPALEKLLPHINGNVGFVF 344
           MRKAI  HLE NP LEKLLPHI GNVGFVF
Sbjct: 61  MRKAIRGHLENNPQLEKLLPHIKGNVGFVF 90


>AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p
           protein.
          Length = 317

 Score =  151 bits (366), Expect = 2e-37
 Identities = 67/90 (74%), Positives = 77/90 (85%)
 Frame = +3

Query: 75  MGREDNATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 254
           M RE+ A WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1   MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60

Query: 255 MRKAINDHLETNPALEKLLPHINGNVGFVF 344
           MRKAI  HLE NP LEKLLPHI GNVGFVF
Sbjct: 61  MRKAIRGHLENNPQLEKLLPHIKGNVGFVF 90


>AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA
           protein.
          Length = 317

 Score =  151 bits (366), Expect = 2e-37
 Identities = 67/90 (74%), Positives = 77/90 (85%)
 Frame = +3

Query: 75  MGREDNATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 254
           M RE+ A WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1   MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60

Query: 255 MRKAINDHLETNPALEKLLPHINGNVGFVF 344
           MRKAI  HLE NP LEKLLPHI GNVGFVF
Sbjct: 61  MRKAIRGHLENNPQLEKLLPHIKGNVGFVF 90


>AY061517-1|AAL29065.1|  256|Drosophila melanogaster LD47064p
           protein.
          Length = 256

 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
 Frame = +3

Query: 99  WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI--N 272
           WK      I   + +YP  F+    N+ +  ++ +R  L+ +S  + GKN +M+  +   
Sbjct: 22  WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNSRFIFGKNRVMQIGLGRT 81

Query: 273 DHLETNPALEKLLPHINGNVGFVF 344
              E  P L KL   + G VG +F
Sbjct: 82  KSEEVEPELHKLSKRLTGQVGLLF 105


>AE013599-1019|AAF58844.1|  256|Drosophila melanogaster CG1381-PA
           protein.
          Length = 256

 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
 Frame = +3

Query: 99  WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI--N 272
           WK      I   + +YP  F+    N+ +  ++ +R  L+ +S  + GKN +M+  +   
Sbjct: 22  WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNSRFIFGKNRVMQIGLGRT 81

Query: 273 DHLETNPALEKLLPHINGNVGFVF 344
              E  P L KL   + G VG +F
Sbjct: 82  KSEEVEPELHKLSKRLTGQVGLLF 105


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,604,331
Number of Sequences: 53049
Number of extensions: 360815
Number of successful extensions: 1007
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 819378027
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)