Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_M16
         (488 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D86957-1|BAA13193.1|  508|Homo sapiens KIAA0202 protein.               29   8.6  
AF440763-1|AAO13880.1|  453|Homo sapiens septin SEPT8_v3 protein.      29   8.6  
AF440762-1|AAO13879.1|  562|Homo sapiens septin SEPT8_v2 protein.      29   8.6  
AF440761-1|AAO13878.1|  508|Homo sapiens septin SEPT8_v1* protein.     29   8.6  
AF179995-1|AAG09407.1|  508|Homo sapiens septin 2 protein.             29   8.6  

>D86957-1|BAA13193.1|  508|Homo sapiens KIAA0202 protein.
          Length = 508

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +3

Query: 165 NRLIAIGARVGVSLPYLCQGQTRCGHTATVGKLLDTVLDTREA 293
           ++L++     G S   LC G+T  G +  +  L +T  +T EA
Sbjct: 111 DQLVSKSVTQGFSFNILCVGETGIGKSTLMNTLFNTTFETEEA 153


>AF440763-1|AAO13880.1|  453|Homo sapiens septin SEPT8_v3 protein.
          Length = 453

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +3

Query: 165 NRLIAIGARVGVSLPYLCQGQTRCGHTATVGKLLDTVLDTREA 293
           ++L++     G S   LC G+T  G +  +  L +T  +T EA
Sbjct: 56  DQLVSKSVTQGFSFNILCVGETGIGKSTLMNTLFNTTFETEEA 98


>AF440762-1|AAO13879.1|  562|Homo sapiens septin SEPT8_v2 protein.
          Length = 562

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +3

Query: 165 NRLIAIGARVGVSLPYLCQGQTRCGHTATVGKLLDTVLDTREA 293
           ++L++     G S   LC G+T  G +  +  L +T  +T EA
Sbjct: 111 DQLVSKSVTQGFSFNILCVGETGIGKSTLMNTLFNTTFETEEA 153


>AF440761-1|AAO13878.1|  508|Homo sapiens septin SEPT8_v1* protein.
          Length = 508

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +3

Query: 165 NRLIAIGARVGVSLPYLCQGQTRCGHTATVGKLLDTVLDTREA 293
           ++L++     G S   LC G+T  G +  +  L +T  +T EA
Sbjct: 111 DQLVSKSVTQGFSFNILCVGETGIGKSTLMNTLFNTTFETEEA 153


>AF179995-1|AAG09407.1|  508|Homo sapiens septin 2 protein.
          Length = 508

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +3

Query: 165 NRLIAIGARVGVSLPYLCQGQTRCGHTATVGKLLDTVLDTREA 293
           ++L++     G S   LC G+T  G +  +  L +T  +T EA
Sbjct: 111 DQLVSKSVTQGFSFNILCVGETGIGKSTLMNTLFNTTFETEEA 153


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,719,361
Number of Sequences: 237096
Number of extensions: 1515476
Number of successful extensions: 3985
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3985
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)