Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_M15
(481 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z97056-3|CAB09792.1| 650|Homo sapiens DEAD (Asp-Glu-Ala-Asp) bo... 74 2e-13
U59321-1|AAC50787.1| 650|Homo sapiens DEAD-box protein p72 prot... 74 2e-13
CR456432-1|CAG30318.1| 652|Homo sapiens DDX17 protein. 74 2e-13
BC000595-1|AAH00595.2| 729|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 74 2e-13
AB209595-1|BAD92832.1| 737|Homo sapiens DEAD box polypeptide 17... 74 2e-13
X52104-1|CAA36324.1| 614|Homo sapiens protein ( Human mRNA for ... 64 2e-10
X15729-1|CAA33751.1| 614|Homo sapiens protein ( Human mRNA for ... 64 2e-10
BT006943-1|AAP35589.1| 614|Homo sapiens DEAD/H (Asp-Glu-Ala-Asp... 64 2e-10
BC016027-1|AAH16027.1| 614|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 64 2e-10
AF015812-1|AAB84094.1| 614|Homo sapiens RNA helicase p68 protein. 64 2e-10
AB209919-1|BAD93156.1| 457|Homo sapiens Hypothetical protein DK... 64 2e-10
BX571764-1|CAE11890.1| 406|Homo sapiens hypothetical protein pr... 64 3e-10
AJ010931-1|CAA09408.1| 111|Homo sapiens p68 RNA helicase protein. 60 3e-09
BC093081-1|AAH93081.1| 938|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 56 6e-08
BC078667-1|AAH78667.1| 919|Homo sapiens DDX42 protein protein. 56 6e-08
BC015505-1|AAH15505.1| 819|Homo sapiens DDX42 protein protein. 56 6e-08
AF083255-1|AAC32396.1| 709|Homo sapiens RNA helicase-related pr... 56 6e-08
AB036090-1|BAC66466.1| 938|Homo sapiens RNA helicase-related pr... 56 6e-08
BC041801-1|AAH41801.1| 619|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 47 3e-05
BC014183-1|AAH14183.1| 434|Homo sapiens DDX59 protein protein. 47 3e-05
AL445483-6|CAI17056.1| 619|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 47 3e-05
AL445483-5|CAI17055.1| 580|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 47 3e-05
BX641072-1|CAE46035.1| 496|Homo sapiens hypothetical protein pr... 44 2e-04
BC015476-1|AAH15476.1| 622|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 44 2e-04
AK222598-1|BAD96318.1| 622|Homo sapiens DEAD-box protein abstra... 44 2e-04
AK027768-1|BAB55355.1| 622|Homo sapiens protein ( Homo sapiens ... 44 2e-04
AK001255-1|BAA91585.1| 622|Homo sapiens protein ( Homo sapiens ... 44 2e-04
AF195417-1|AAF04150.1| 621|Homo sapiens DEAD-box protein abstra... 44 2e-04
BC002366-1|AAH02366.1| 820|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 44 3e-04
AF026402-1|AAB87902.1| 820|Homo sapiens U5 snRNP 100 kD protein... 44 3e-04
BC012304-1|AAH12304.1| 1031|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 43 5e-04
AF106680-1|AAD43033.1| 1031|Homo sapiens RNA helicase protein. 43 5e-04
AB018344-1|BAA34521.2| 1058|Homo sapiens KIAA0801 protein protein. 43 5e-04
BC041785-1|AAH41785.1| 599|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 30 3.7
AK093661-1|BAC04214.1| 360|Homo sapiens protein ( Homo sapiens ... 30 3.7
AK001652-1|BAA91812.1| 491|Homo sapiens protein ( Homo sapiens ... 30 3.7
AB208938-1|BAD92175.1| 512|Homo sapiens ATP-dependent RNA helic... 30 3.7
>Z97056-3|CAB09792.1| 650|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 17 protein.
Length = 650
Score = 74.1 bits (174), Expect = 2e-13
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +3
Query: 225 QNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTV-SGVVSTNPIEHFE 401
+ +R+ WD L F K+FY H V +PYEV++ R K E+TV G V P+ F
Sbjct: 36 ERLRKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFH 95
Query: 402 EGNFPDYVCXAIKSMGYKDPTPIQAQ 479
NFP YV + + +PTPIQ Q
Sbjct: 96 HANFPQYVMDVLMDQHFTEPTPIQCQ 121
>U59321-1|AAC50787.1| 650|Homo sapiens DEAD-box protein p72
protein.
Length = 650
Score = 74.1 bits (174), Expect = 2e-13
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +3
Query: 225 QNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTV-SGVVSTNPIEHFE 401
+ +R+ WD L F K+FY H V +PYEV++ R K E+TV G V P+ F
Sbjct: 36 ERLRKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFH 95
Query: 402 EGNFPDYVCXAIKSMGYKDPTPIQAQ 479
NFP YV + + +PTPIQ Q
Sbjct: 96 HANFPQYVMDVLMDQHFTEPTPIQCQ 121
>CR456432-1|CAG30318.1| 652|Homo sapiens DDX17 protein.
Length = 652
Score = 74.1 bits (174), Expect = 2e-13
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +3
Query: 225 QNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTV-SGVVSTNPIEHFE 401
+ +R+ WD L F K+FY H V +PYEV++ R K E+TV G V P+ F
Sbjct: 36 ERLRKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFH 95
Query: 402 EGNFPDYVCXAIKSMGYKDPTPIQAQ 479
NFP YV + + +PTPIQ Q
Sbjct: 96 HANFPQYVMDVLMDQHFTEPTPIQCQ 121
>BC000595-1|AAH00595.2| 729|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 17 protein.
Length = 729
Score = 74.1 bits (174), Expect = 2e-13
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +3
Query: 225 QNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTV-SGVVSTNPIEHFE 401
+ +R+ WD L F K+FY H V +PYEV++ R K E+TV G V P+ F
Sbjct: 115 ERLRKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFH 174
Query: 402 EGNFPDYVCXAIKSMGYKDPTPIQAQ 479
NFP YV + + +PTPIQ Q
Sbjct: 175 HANFPQYVMDVLMDQHFTEPTPIQCQ 200
>AB209595-1|BAD92832.1| 737|Homo sapiens DEAD box polypeptide 17
isoform p82 variant protein.
Length = 737
Score = 74.1 bits (174), Expect = 2e-13
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +3
Query: 225 QNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTV-SGVVSTNPIEHFE 401
+ +R+ WD L F K+FY H V +PYEV++ R K E+TV G V P+ F
Sbjct: 117 ERLRKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFH 176
Query: 402 EGNFPDYVCXAIKSMGYKDPTPIQAQ 479
NFP YV + + +PTPIQ Q
Sbjct: 177 HANFPQYVMDVLMDQHFTEPTPIQCQ 202
>X52104-1|CAA36324.1| 614|Homo sapiens protein ( Human mRNA for p68
protein. ).
Length = 614
Score = 64.5 bits (150), Expect = 2e-10
Identities = 31/85 (36%), Positives = 43/85 (50%)
Frame = +3
Query: 225 QNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVVSTNPIEHFEE 404
+ + + W+ L F K+FY H + R+ EVE YR E+TV G P+ +F E
Sbjct: 39 EKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYE 98
Query: 405 GNFPDYVCXAIKSMGYKDPTPIQAQ 479
NFP V I + +PT IQAQ
Sbjct: 99 ANFPANVMDVIARQNFTEPTAIQAQ 123
>X15729-1|CAA33751.1| 614|Homo sapiens protein ( Human mRNA for
nuclear p68 protein. ).
Length = 614
Score = 64.5 bits (150), Expect = 2e-10
Identities = 31/85 (36%), Positives = 43/85 (50%)
Frame = +3
Query: 225 QNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVVSTNPIEHFEE 404
+ + + W+ L F K+FY H + R+ EVE YR E+TV G P+ +F E
Sbjct: 39 EKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYE 98
Query: 405 GNFPDYVCXAIKSMGYKDPTPIQAQ 479
NFP V I + +PT IQAQ
Sbjct: 99 ANFPANVMDVIARQNFTEPTAIQAQ 123
>BT006943-1|AAP35589.1| 614|Homo sapiens DEAD/H
(Asp-Glu-Ala-Asp/His) box polypeptide 5 (RNA helicase,
68kDa) protein.
Length = 614
Score = 64.5 bits (150), Expect = 2e-10
Identities = 31/85 (36%), Positives = 43/85 (50%)
Frame = +3
Query: 225 QNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVVSTNPIEHFEE 404
+ + + W+ L F K+FY H + R+ EVE YR E+TV G P+ +F E
Sbjct: 39 EKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYE 98
Query: 405 GNFPDYVCXAIKSMGYKDPTPIQAQ 479
NFP V I + +PT IQAQ
Sbjct: 99 ANFPANVMDVIARQNFTEPTAIQAQ 123
>BC016027-1|AAH16027.1| 614|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 5 protein.
Length = 614
Score = 64.5 bits (150), Expect = 2e-10
Identities = 31/85 (36%), Positives = 43/85 (50%)
Frame = +3
Query: 225 QNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVVSTNPIEHFEE 404
+ + + W+ L F K+FY H + R+ EVE YR E+TV G P+ +F E
Sbjct: 39 EKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYE 98
Query: 405 GNFPDYVCXAIKSMGYKDPTPIQAQ 479
NFP V I + +PT IQAQ
Sbjct: 99 ANFPANVMDVIARQNFTEPTAIQAQ 123
>AF015812-1|AAB84094.1| 614|Homo sapiens RNA helicase p68 protein.
Length = 614
Score = 64.5 bits (150), Expect = 2e-10
Identities = 31/85 (36%), Positives = 43/85 (50%)
Frame = +3
Query: 225 QNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVVSTNPIEHFEE 404
+ + + W+ L F K+FY H + R+ EVE YR E+TV G P+ +F E
Sbjct: 39 EKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYE 98
Query: 405 GNFPDYVCXAIKSMGYKDPTPIQAQ 479
NFP V I + +PT IQAQ
Sbjct: 99 ANFPANVMDVIARQNFTEPTAIQAQ 123
>AB209919-1|BAD93156.1| 457|Homo sapiens Hypothetical protein
DKFZp686J01190 variant protein.
Length = 457
Score = 64.5 bits (150), Expect = 2e-10
Identities = 31/85 (36%), Positives = 43/85 (50%)
Frame = +3
Query: 225 QNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVVSTNPIEHFEE 404
+ + + W+ L F K+FY H + R+ EVE YR E+TV G P+ +F E
Sbjct: 90 EKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYE 149
Query: 405 GNFPDYVCXAIKSMGYKDPTPIQAQ 479
NFP V I + +PT IQAQ
Sbjct: 150 ANFPANVMDVIARQNFTEPTAIQAQ 174
>BX571764-1|CAE11890.1| 406|Homo sapiens hypothetical protein
protein.
Length = 406
Score = 63.7 bits (148), Expect = 3e-10
Identities = 31/85 (36%), Positives = 43/85 (50%)
Frame = +3
Query: 225 QNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVVSTNPIEHFEE 404
+ + + W+ L F K+FY H + R+ EVE YR E+TV G P+ +F E
Sbjct: 39 EKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRGKEITVRGHNCPKPVLNFYE 98
Query: 405 GNFPDYVCXAIKSMGYKDPTPIQAQ 479
NFP V I + +PT IQAQ
Sbjct: 99 ANFPANVMDVIARQNFTEPTAIQAQ 123
>AJ010931-1|CAA09408.1| 111|Homo sapiens p68 RNA helicase protein.
Length = 111
Score = 60.5 bits (140), Expect = 3e-09
Identities = 29/70 (41%), Positives = 37/70 (52%)
Frame = +3
Query: 270 FNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVVSTNPIEHFEEGNFPDYVCXAIKSMG 449
F K+FY H + R+ EVE YR E+TV G P+ +F E NFP V I
Sbjct: 2 FEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDXIARQN 61
Query: 450 YKDPTPIQAQ 479
+ +PT IQAQ
Sbjct: 62 FTEPTAIQAQ 71
>BC093081-1|AAH93081.1| 938|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 42 protein.
Length = 938
Score = 56.0 bits (129), Expect = 6e-08
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = +3
Query: 267 PFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVVSTNPIEHFEEGNFPDYVCXAIKSM 446
PF K+FYN H+ + + +P ++ D R+K + VSG P F F + + I+
Sbjct: 212 PFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKS 271
Query: 447 GYKDPTPIQAQ 479
Y PTPIQ Q
Sbjct: 272 EYTQPTPIQCQ 282
>BC078667-1|AAH78667.1| 919|Homo sapiens DDX42 protein protein.
Length = 919
Score = 56.0 bits (129), Expect = 6e-08
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = +3
Query: 267 PFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVVSTNPIEHFEEGNFPDYVCXAIKSM 446
PF K+FYN H+ + + +P ++ D R+K + VSG P F F + + I+
Sbjct: 193 PFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKS 252
Query: 447 GYKDPTPIQAQ 479
Y PTPIQ Q
Sbjct: 253 EYTQPTPIQCQ 263
>BC015505-1|AAH15505.1| 819|Homo sapiens DDX42 protein protein.
Length = 819
Score = 56.0 bits (129), Expect = 6e-08
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = +3
Query: 267 PFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVVSTNPIEHFEEGNFPDYVCXAIKSM 446
PF K+FYN H+ + + +P ++ D R+K + VSG P F F + + I+
Sbjct: 93 PFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKS 152
Query: 447 GYKDPTPIQAQ 479
Y PTPIQ Q
Sbjct: 153 EYTQPTPIQCQ 163
>AF083255-1|AAC32396.1| 709|Homo sapiens RNA helicase-related
protein protein.
Length = 709
Score = 56.0 bits (129), Expect = 6e-08
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = +3
Query: 267 PFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVVSTNPIEHFEEGNFPDYVCXAIKSM 446
PF K+FYN H+ + + +P ++ D R+K + VSG P F F + + I+
Sbjct: 93 PFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKS 152
Query: 447 GYKDPTPIQAQ 479
Y PTPIQ Q
Sbjct: 153 EYTQPTPIQCQ 163
>AB036090-1|BAC66466.1| 938|Homo sapiens RNA helicase-related
protein protein.
Length = 938
Score = 56.0 bits (129), Expect = 6e-08
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = +3
Query: 267 PFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVVSTNPIEHFEEGNFPDYVCXAIKSM 446
PF K+FYN H+ + + +P ++ D R+K + VSG P F F + + I+
Sbjct: 212 PFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKS 271
Query: 447 GYKDPTPIQAQ 479
Y PTPIQ Q
Sbjct: 272 EYTQPTPIQCQ 282
>BC041801-1|AAH41801.1| 619|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 59 protein.
Length = 619
Score = 47.2 bits (107), Expect = 3e-05
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 249 DSLSLQPFNKDF-YNPHKSVLDRSPYEVEDYRNKHEVTVSGVVSTNPIEHFEEGNFPDYV 425
DS P N + Y H +L+ ++E+ + + + V G T PI FE + P+ +
Sbjct: 155 DSEPESPLNASYVYKEHPFILNLQEDQIENLKQQLGILVQGQEVTRPIIDFEHCSLPEVL 214
Query: 426 CXAIKSMGYKDPTPIQAQ 479
+K GY+ PTPIQ Q
Sbjct: 215 NHNLKKSGYEVPTPIQMQ 232
>BC014183-1|AAH14183.1| 434|Homo sapiens DDX59 protein protein.
Length = 434
Score = 47.2 bits (107), Expect = 3e-05
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 249 DSLSLQPFNKDF-YNPHKSVLDRSPYEVEDYRNKHEVTVSGVVSTNPIEHFEEGNFPDYV 425
DS P N + Y H +L+ ++E+ + + + V G T PI FE + P+ +
Sbjct: 155 DSEPESPLNASYVYKEHPFILNLQEDQIENLKQQLGILVQGQEVTRPIIDFEHCSLPEVL 214
Query: 426 CXAIKSMGYKDPTPIQAQ 479
+K GY+ PTPIQ Q
Sbjct: 215 NHNLKKSGYEVPTPIQMQ 232
>AL445483-6|CAI17056.1| 619|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 59 protein.
Length = 619
Score = 47.2 bits (107), Expect = 3e-05
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 249 DSLSLQPFNKDF-YNPHKSVLDRSPYEVEDYRNKHEVTVSGVVSTNPIEHFEEGNFPDYV 425
DS P N + Y H +L+ ++E+ + + + V G T PI FE + P+ +
Sbjct: 155 DSEPESPLNASYVYKEHPFILNLQEDQIENLKQQLGILVQGQEVTRPIIDFEHCSLPEVL 214
Query: 426 CXAIKSMGYKDPTPIQAQ 479
+K GY+ PTPIQ Q
Sbjct: 215 NHNLKKSGYEVPTPIQMQ 232
>AL445483-5|CAI17055.1| 580|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 59 protein.
Length = 580
Score = 47.2 bits (107), Expect = 3e-05
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 249 DSLSLQPFNKDF-YNPHKSVLDRSPYEVEDYRNKHEVTVSGVVSTNPIEHFEEGNFPDYV 425
DS P N + Y H +L+ ++E+ + + + V G T PI FE + P+ +
Sbjct: 155 DSEPESPLNASYVYKEHPFILNLQEDQIENLKQQLGILVQGQEVTRPIIDFEHCSLPEVL 214
Query: 426 CXAIKSMGYKDPTPIQAQ 479
+K GY+ PTPIQ Q
Sbjct: 215 NHNLKKSGYEVPTPIQMQ 232
>BX641072-1|CAE46035.1| 496|Homo sapiens hypothetical protein
protein.
Length = 496
Score = 44.4 bits (100), Expect = 2e-04
Identities = 24/68 (35%), Positives = 32/68 (47%)
Frame = +3
Query: 276 KDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVVSTNPIEHFEEGNFPDYVCXAIKSMGYK 455
K + P + VL S E R K+ + V G PI+ F+E FP + +K G
Sbjct: 17 KTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIH 76
Query: 456 DPTPIQAQ 479
PTPIQ Q
Sbjct: 77 HPTPIQIQ 84
>BC015476-1|AAH15476.1| 622|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41 protein.
Length = 622
Score = 44.4 bits (100), Expect = 2e-04
Identities = 24/68 (35%), Positives = 32/68 (47%)
Frame = +3
Query: 276 KDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVVSTNPIEHFEEGNFPDYVCXAIKSMGYK 455
K + P + VL S E R K+ + V G PI+ F+E FP + +K G
Sbjct: 143 KTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIH 202
Query: 456 DPTPIQAQ 479
PTPIQ Q
Sbjct: 203 HPTPIQIQ 210
>AK222598-1|BAD96318.1| 622|Homo sapiens DEAD-box protein abstrakt
variant protein.
Length = 622
Score = 44.4 bits (100), Expect = 2e-04
Identities = 24/68 (35%), Positives = 32/68 (47%)
Frame = +3
Query: 276 KDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVVSTNPIEHFEEGNFPDYVCXAIKSMGYK 455
K + P + VL S E R K+ + V G PI+ F+E FP + +K G
Sbjct: 143 KTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIH 202
Query: 456 DPTPIQAQ 479
PTPIQ Q
Sbjct: 203 HPTPIQIQ 210
>AK027768-1|BAB55355.1| 622|Homo sapiens protein ( Homo sapiens
cDNA FLJ14862 fis, clone PLACE1001739, weakly similar to
PUTATIVE ATP-DEPENDENT RNA HELICASE PL10. ).
Length = 622
Score = 44.4 bits (100), Expect = 2e-04
Identities = 24/68 (35%), Positives = 32/68 (47%)
Frame = +3
Query: 276 KDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVVSTNPIEHFEEGNFPDYVCXAIKSMGYK 455
K + P + VL S E R K+ + V G PI+ F+E FP + +K G
Sbjct: 143 KTSWTPPRYVLSMSEERHERVREKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIH 202
Query: 456 DPTPIQAQ 479
PTPIQ Q
Sbjct: 203 HPTPIQIQ 210
>AK001255-1|BAA91585.1| 622|Homo sapiens protein ( Homo sapiens
cDNA FLJ10393 fis, clone NT2RM4000191, weakly similar to
PUTATIVE ATP-DEPENDENT RNA HELICASE PL10. ).
Length = 622
Score = 44.4 bits (100), Expect = 2e-04
Identities = 24/68 (35%), Positives = 32/68 (47%)
Frame = +3
Query: 276 KDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVVSTNPIEHFEEGNFPDYVCXAIKSMGYK 455
K + P + VL S E R K+ + V G PI+ F+E FP + +K G
Sbjct: 143 KTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPATILRGLKKKGIH 202
Query: 456 DPTPIQAQ 479
PTPIQ Q
Sbjct: 203 HPTPIQIQ 210
>AF195417-1|AAF04150.1| 621|Homo sapiens DEAD-box protein abstrakt
protein.
Length = 621
Score = 44.4 bits (100), Expect = 2e-04
Identities = 24/68 (35%), Positives = 32/68 (47%)
Frame = +3
Query: 276 KDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVVSTNPIEHFEEGNFPDYVCXAIKSMGYK 455
K + P + VL S E R K+ + V G PI+ F+E FP + +K G
Sbjct: 142 KTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIH 201
Query: 456 DPTPIQAQ 479
PTPIQ Q
Sbjct: 202 HPTPIQIQ 209
>BC002366-1|AAH02366.1| 820|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 23 protein.
Length = 820
Score = 44.0 bits (99), Expect = 3e-04
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 336 YRNKHEVTVSGVVSTNPIEHFEEGNFPDYVCXAIKSMGYKDPTPIQAQ 479
+R + +T G NPI +++ + P ++ I GYK+PTPIQ Q
Sbjct: 373 FREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQ 420
>AF026402-1|AAB87902.1| 820|Homo sapiens U5 snRNP 100 kD protein
protein.
Length = 820
Score = 44.0 bits (99), Expect = 3e-04
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 336 YRNKHEVTVSGVVSTNPIEHFEEGNFPDYVCXAIKSMGYKDPTPIQAQ 479
+R + +T G NPI +++ + P ++ I GYK+PTPIQ Q
Sbjct: 373 FREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQ 420
>BC012304-1|AAH12304.1| 1031|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46 protein.
Length = 1031
Score = 43.2 bits (97), Expect = 5e-04
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 255 LSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHE-VTVSGVVSTNPIEHFEEGNFPDYVCX 431
+ +PF K+FY + S EV +R + E +TV G PI+ + + +
Sbjct: 326 IEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILN 385
Query: 432 AIKSMGYKDPTPIQAQ 479
++K GY+ PTPIQ Q
Sbjct: 386 SLKKHGYEKPTPIQTQ 401
>AF106680-1|AAD43033.1| 1031|Homo sapiens RNA helicase protein.
Length = 1031
Score = 43.2 bits (97), Expect = 5e-04
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 255 LSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHE-VTVSGVVSTNPIEHFEEGNFPDYVCX 431
+ +PF K+FY + S EV +R + E +TV G PI+ + + +
Sbjct: 326 IEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILN 385
Query: 432 AIKSMGYKDPTPIQAQ 479
++K GY+ PTPIQ Q
Sbjct: 386 SLKKHGYEKPTPIQTQ 401
>AB018344-1|BAA34521.2| 1058|Homo sapiens KIAA0801 protein protein.
Length = 1058
Score = 43.2 bits (97), Expect = 5e-04
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 255 LSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHE-VTVSGVVSTNPIEHFEEGNFPDYVCX 431
+ +PF K+FY + S EV +R + E +TV G PI+ + + +
Sbjct: 352 IEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILN 411
Query: 432 AIKSMGYKDPTPIQAQ 479
++K GY+ PTPIQ Q
Sbjct: 412 SLKKHGYEKPTPIQTQ 427
>BC041785-1|AAH41785.1| 599|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 52 protein.
Length = 599
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = +3
Query: 339 RNKHEVTVSGVVSTNPIEHF----EEGNFPDYVCXAIKSMGYKDPTPIQAQ 479
RNKH++ V G +PI F +E + I G++ PTPIQ Q
Sbjct: 144 RNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQ 194
>AK093661-1|BAC04214.1| 360|Homo sapiens protein ( Homo sapiens
cDNA FLJ36342 fis, clone THYMU2006666, highly similar to
Homo sapiens putative ATP-dependent RNA helicase ROK1
mRNA. ).
Length = 360
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = +3
Query: 339 RNKHEVTVSGVVSTNPIEHF----EEGNFPDYVCXAIKSMGYKDPTPIQAQ 479
RNKH++ V G +PI F +E + I G++ PTPIQ Q
Sbjct: 36 RNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQ 86
>AK001652-1|BAA91812.1| 491|Homo sapiens protein ( Homo sapiens
cDNA FLJ10790 fis, clone NT2RP4000518, weakly similar to
ATP-DEPENDENT RNA HELICASE ROK1. ).
Length = 491
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = +3
Query: 339 RNKHEVTVSGVVSTNPIEHF----EEGNFPDYVCXAIKSMGYKDPTPIQAQ 479
RNKH++ V G +PI F +E + I G++ PTPIQ Q
Sbjct: 36 RNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQ 86
>AB208938-1|BAD92175.1| 512|Homo sapiens ATP-dependent RNA helicase
ROK1 isoform a variant protein.
Length = 512
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = +3
Query: 339 RNKHEVTVSGVVSTNPIEHF----EEGNFPDYVCXAIKSMGYKDPTPIQAQ 479
RNKH++ V G +PI F +E + I G++ PTPIQ Q
Sbjct: 143 RNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQ 193
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,762,569
Number of Sequences: 237096
Number of extensions: 1046843
Number of successful extensions: 1796
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1788
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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