BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_M12
(561 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070802-1|AAL48424.1| 133|Drosophila melanogaster AT19071p pro... 32 0.46
AE014134-1628|AAF52766.1| 133|Drosophila melanogaster CG13110-P... 32 0.46
BT011138-1|AAR82805.1| 857|Drosophila melanogaster GM05853p pro... 29 3.3
BT011097-1|AAR82763.1| 871|Drosophila melanogaster RE21038p pro... 29 3.3
AF104355-1|AAD08705.1| 844|Drosophila melanogaster PIWI protein. 29 3.3
AF104354-1|AAD08704.1| 843|Drosophila melanogaster PIWI protein. 29 3.3
AE014134-2002|AAF53043.1| 843|Drosophila melanogaster CG6122-PA... 29 3.3
>AY070802-1|AAL48424.1| 133|Drosophila melanogaster AT19071p
protein.
Length = 133
Score = 32.3 bits (70), Expect = 0.46
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -1
Query: 312 GIGLIPINAVFLVDRYFLDSTDPLSFFFSIYSFVHFPLQFT 190
G+ ++ AV VDR++L+ D +F Y+ VH P++FT
Sbjct: 29 GLKVLDYAAVRGVDRFYLECQDYRDYFKDPYNRVHKPIRFT 69
>AE014134-1628|AAF52766.1| 133|Drosophila melanogaster CG13110-PA
protein.
Length = 133
Score = 32.3 bits (70), Expect = 0.46
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -1
Query: 312 GIGLIPINAVFLVDRYFLDSTDPLSFFFSIYSFVHFPLQFT 190
G+ ++ AV VDR++L+ D +F Y+ VH P++FT
Sbjct: 29 GLKVLDYAAVRGVDRFYLECQDYRDYFKDPYNRVHKPIRFT 69
>BT011138-1|AAR82805.1| 857|Drosophila melanogaster GM05853p
protein.
Length = 857
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = -3
Query: 484 ENYWTDQRETATIRRGINRRWL*AIYSSNSMSPLPCFLDLFVYYSSGAP----SPQNY*T 317
+ ++ DQR T G++R W I + L LD +SG SPQ +
Sbjct: 473 QRHFRDQRMLTTPSDGLDR-WA-VIAPQRNSHELRTLLDSLYRAASGMGLRIRSPQEFII 530
Query: 316 YRDRTDTYQRSI 281
Y DRT TY R++
Sbjct: 531 YDDRTGTYVRAM 542
>BT011097-1|AAR82763.1| 871|Drosophila melanogaster RE21038p
protein.
Length = 871
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = -3
Query: 484 ENYWTDQRETATIRRGINRRWL*AIYSSNSMSPLPCFLDLFVYYSSGAP----SPQNY*T 317
+ ++ DQR T G++R W I + L LD +SG SPQ +
Sbjct: 487 QRHFRDQRMLTTPSDGLDR-WA-VIAPQRNSHELRTLLDSLYRAASGMGLRIRSPQEFII 544
Query: 316 YRDRTDTYQRSI 281
Y DRT TY R++
Sbjct: 545 YDDRTGTYVRAM 556
>AF104355-1|AAD08705.1| 844|Drosophila melanogaster PIWI protein.
Length = 844
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = -3
Query: 484 ENYWTDQRETATIRRGINRRWL*AIYSSNSMSPLPCFLDLFVYYSSGAP----SPQNY*T 317
+ ++ DQR T G++R W I + L LD +SG SPQ +
Sbjct: 459 QRHFRDQRMLTTPSDGLDR-WA-VIAPQRNSHELRTLLDSLYRAASGMGLRIRSPQEFII 516
Query: 316 YRDRTDTYQRSI 281
Y DRT TY R++
Sbjct: 517 YDDRTGTYVRAM 528
>AF104354-1|AAD08704.1| 843|Drosophila melanogaster PIWI protein.
Length = 843
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = -3
Query: 484 ENYWTDQRETATIRRGINRRWL*AIYSSNSMSPLPCFLDLFVYYSSGAP----SPQNY*T 317
+ ++ DQR T G++R W I + L LD +SG SPQ +
Sbjct: 459 QRHFRDQRMLTTPSDGLDR-WA-VIAPQRNSHELRTLLDSLYRAASGMGLRIRSPQEFII 516
Query: 316 YRDRTDTYQRSI 281
Y DRT TY R++
Sbjct: 517 YDDRTGTYVRAM 528
>AE014134-2002|AAF53043.1| 843|Drosophila melanogaster CG6122-PA
protein.
Length = 843
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = -3
Query: 484 ENYWTDQRETATIRRGINRRWL*AIYSSNSMSPLPCFLDLFVYYSSGAP----SPQNY*T 317
+ ++ DQR T G++R W I + L LD +SG SPQ +
Sbjct: 459 QRHFRDQRMLTTPSDGLDR-WA-VIAPQRNSHELRTLLDSLYRAASGMGLRIRSPQEFII 516
Query: 316 YRDRTDTYQRSI 281
Y DRT TY R++
Sbjct: 517 YDDRTGTYVRAM 528
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,995,969
Number of Sequences: 53049
Number of extensions: 413460
Number of successful extensions: 1273
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1273
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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