Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_M10
(428 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032109-1|AAH32109.1| 859|Homo sapiens low density lipoprotein... 38 0.019
AF166350-1|AAD44360.1| 859|Homo sapiens ST7 protein protein. 38 0.019
AB208957-1|BAD92194.1| 793|Homo sapiens suppression of tumorige... 38 0.019
AY911311-1|AAX81434.1| 315|Homo sapiens chitinase family protei... 35 0.13
BC139920-1|AAI39921.1| 407|Homo sapiens CHIA protein protein. 34 0.18
BC139901-1|AAI39902.1| 407|Homo sapiens CHIA protein protein. 34 0.18
BC106910-1|AAI06911.1| 368|Homo sapiens chitinase, acidic protein. 34 0.18
BC047336-1|AAH47336.2| 368|Homo sapiens chitinase, acidic protein. 34 0.18
BC036339-1|AAH36339.2| 368|Homo sapiens chitinase, acidic protein. 34 0.18
AY911310-1|AAX81433.1| 315|Homo sapiens chitinase family protei... 34 0.18
AY825504-1|AAX54833.1| 430|Homo sapiens chitinase family protei... 34 0.18
AY789445-1|AAX81432.1| 315|Homo sapiens chitinase family protei... 34 0.18
AY789444-1|AAX81431.1| 368|Homo sapiens chitinase family protei... 34 0.18
AL513202-5|CAH70804.1| 405|Homo sapiens eosinophil chemotactic ... 34 0.18
AL513202-4|CAH70803.1| 476|Homo sapiens eosinophil chemotactic ... 34 0.18
AL513202-3|CAH70802.1| 420|Homo sapiens eosinophil chemotactic ... 34 0.18
AL356387-9|CAI19266.1| 405|Homo sapiens eosinophil chemotactic ... 34 0.18
AL356387-8|CAI19265.1| 476|Homo sapiens eosinophil chemotactic ... 34 0.18
AL356387-6|CAI19263.1| 420|Homo sapiens eosinophil chemotactic ... 34 0.18
AF290004-1|AAG60019.1| 476|Homo sapiens acidic mammalian chitin... 34 0.18
AB025009-1|BAA86981.1| 315|Homo sapiens novel member of chitina... 34 0.18
AB025008-1|BAA86980.1| 368|Homo sapiens novel member of chitina... 34 0.18
X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific proteo... 31 1.3
J05062-1|AAA35726.1| 480|Homo sapiens protein ( Human cartilage... 31 1.3
Z98884-5|CAI21436.1| 1201|Homo sapiens period homolog 3 (Drosoph... 31 2.2
Z98884-3|CAI21434.1| 378|Homo sapiens period homolog 3 (Drosoph... 31 2.2
EF015893-1|ABM64204.1| 1201|Homo sapiens period 3 protein. 31 2.2
BC026102-1|AAH26102.1| 378|Homo sapiens PER3 protein protein. 31 2.2
AY493418-1|AAS72879.1| 1201|Homo sapiens growth-inhibiting prote... 31 2.2
AL157954-1|CAB76084.1| 1201|Homo sapiens hypothetical protein pr... 31 2.2
AF283408-1|AAL38109.1| 1537|Homo sapiens candidate tumor suppres... 29 6.7
AF176832-1|AAF70379.1| 4599|Homo sapiens low density lipoprotein... 29 6.7
AC093039-1|AAX88911.1| 425|Homo sapiens unknown protein. 29 6.7
X13916-1|CAA32112.1| 4544|Homo sapiens LDL-receptor related prec... 29 8.8
DQ314873-1|ABC40732.1| 4544|Homo sapiens low density lipoprotein... 29 8.8
BC116455-1|AAI16456.1| 125|Homo sapiens chromosome 1 open readi... 29 8.8
BC025793-1|AAH25793.1| 106|Homo sapiens C1orf31 protein protein. 29 8.8
AL355472-4|CAI22930.1| 79|Homo sapiens novel protein protein. 29 8.8
AL355472-3|CAI22929.1| 125|Homo sapiens novel protein protein. 29 8.8
AL355472-2|CAI22928.1| 155|Homo sapiens novel protein protein. 29 8.8
AF058427-1|AAC64265.1| 4544|Homo sapiens lipoprotein receptor-re... 29 8.8
AB209498-1|BAD92735.1| 2359|Homo sapiens low density lipoprotein... 29 8.8
>BC032109-1|AAH32109.1| 859|Homo sapiens low density
lipoprotein-related protein 12 protein.
Length = 859
Score = 37.5 bits (83), Expect = 0.019
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +1
Query: 61 FGEASSASAYCRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSE 189
F +C P I C ++G Y CD YW C NG E
Sbjct: 365 FNATYQVDGFCLPWEIPCGGNWGCYTEQQRCDGYWHCPNGRDE 407
>AF166350-1|AAD44360.1| 859|Homo sapiens ST7 protein protein.
Length = 859
Score = 37.5 bits (83), Expect = 0.019
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +1
Query: 61 FGEASSASAYCRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSE 189
F +C P I C ++G Y CD YW C NG E
Sbjct: 365 FNATYQVDGFCLPWEIPCGGNWGCYTEQQRCDGYWHCPNGRDE 407
>AB208957-1|BAD92194.1| 793|Homo sapiens suppression of
tumorigenicity variant protein.
Length = 793
Score = 37.5 bits (83), Expect = 0.019
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +1
Query: 61 FGEASSASAYCRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSE 189
F +C P I C ++G Y CD YW C NG E
Sbjct: 299 FNATYQVDGFCLPWEIPCGGNWGCYTEQQRCDGYWHCPNGRDE 341
>AY911311-1|AAX81434.1| 315|Homo sapiens chitinase family protein
V2 protein.
Length = 315
Score = 34.7 bits (76), Expect = 0.13
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1
Query: 49 GLQEFGEASSASAYCRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDAT 228
G G +S S +C R G YP + + +W C NGV+ + C GL FD +
Sbjct: 255 GSSSSGGSSGGSGFCAGRAN------GLYPVASNRNAFWHCVNGVTYQQNCQAGLVFDTS 308
>BC139920-1|AAI39921.1| 407|Homo sapiens CHIA protein protein.
Length = 407
Score = 34.3 bits (75), Expect = 0.18
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1
Query: 49 GLQEFGEASSASAYCRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDAT 228
G G +S S +C R G YP + + +W C NGV+ + C GL FD +
Sbjct: 347 GSSSSGGSSGGSGFCAGRAN------GLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDTS 400
>BC139901-1|AAI39902.1| 407|Homo sapiens CHIA protein protein.
Length = 407
Score = 34.3 bits (75), Expect = 0.18
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1
Query: 49 GLQEFGEASSASAYCRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDAT 228
G G +S S +C R G YP + + +W C NGV+ + C GL FD +
Sbjct: 347 GSSSSGGSSGGSGFCAGRAN------GLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDTS 400
>BC106910-1|AAI06911.1| 368|Homo sapiens chitinase, acidic protein.
Length = 368
Score = 34.3 bits (75), Expect = 0.18
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1
Query: 49 GLQEFGEASSASAYCRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDAT 228
G G +S S +C R G YP + + +W C NGV+ + C GL FD +
Sbjct: 308 GSSSSGGSSGGSGFCAVRAN------GLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDTS 361
>BC047336-1|AAH47336.2| 368|Homo sapiens chitinase, acidic protein.
Length = 368
Score = 34.3 bits (75), Expect = 0.18
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1
Query: 49 GLQEFGEASSASAYCRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDAT 228
G G +S S +C R G YP + + +W C NGV+ + C GL FD +
Sbjct: 308 GSSSSGGSSGGSGFCAVRAN------GLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDTS 361
>BC036339-1|AAH36339.2| 368|Homo sapiens chitinase, acidic protein.
Length = 368
Score = 34.3 bits (75), Expect = 0.18
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1
Query: 49 GLQEFGEASSASAYCRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDAT 228
G G +S S +C R G YP + + +W C NGV+ + C GL FD +
Sbjct: 308 GSSSSGGSSGGSGFCAVRAN------GLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDTS 361
>AY911310-1|AAX81433.1| 315|Homo sapiens chitinase family protein
V1 protein.
Length = 315
Score = 34.3 bits (75), Expect = 0.18
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1
Query: 49 GLQEFGEASSASAYCRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDAT 228
G G +S S +C R G YP + + +W C NGV+ + C GL FD +
Sbjct: 255 GSSSSGGSSGGSGFCAGRAN------GLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDTS 308
>AY825504-1|AAX54833.1| 430|Homo sapiens chitinase family protein 3
protein.
Length = 430
Score = 34.3 bits (75), Expect = 0.18
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1
Query: 49 GLQEFGEASSASAYCRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDAT 228
G G +S S +C R G YP + + +W C NGV+ + C GL FD +
Sbjct: 370 GSSSSGGSSGGSGFCAVRAN------GLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDTS 423
>AY789445-1|AAX81432.1| 315|Homo sapiens chitinase family protein 2
protein.
Length = 315
Score = 34.3 bits (75), Expect = 0.18
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1
Query: 49 GLQEFGEASSASAYCRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDAT 228
G G +S S +C R G YP + + +W C NGV+ + C GL FD +
Sbjct: 255 GSSSSGGSSGGSGFCAVRAN------GLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDTS 308
>AY789444-1|AAX81431.1| 368|Homo sapiens chitinase family protein 1
protein.
Length = 368
Score = 34.3 bits (75), Expect = 0.18
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1
Query: 49 GLQEFGEASSASAYCRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDAT 228
G G +S S +C R G YP + + +W C NGV+ + C GL FD +
Sbjct: 308 GSSSSGGSSGGSGFCAVRAN------GLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDTS 361
>AL513202-5|CAH70804.1| 405|Homo sapiens eosinophil chemotactic
cytokine (CHIA) protein.
Length = 405
Score = 34.3 bits (75), Expect = 0.18
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1
Query: 49 GLQEFGEASSASAYCRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDAT 228
G G +S S +C R G YP + + +W C NGV+ + C GL FD +
Sbjct: 345 GSSSSGGSSGGSGFCAVRAN------GLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDTS 398
>AL513202-4|CAH70803.1| 476|Homo sapiens eosinophil chemotactic
cytokine (CHIA) protein.
Length = 476
Score = 34.3 bits (75), Expect = 0.18
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1
Query: 49 GLQEFGEASSASAYCRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDAT 228
G G +S S +C R G YP + + +W C NGV+ + C GL FD +
Sbjct: 416 GSSSSGGSSGGSGFCAVRAN------GLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDTS 469
>AL513202-3|CAH70802.1| 420|Homo sapiens eosinophil chemotactic
cytokine (CHIA) protein.
Length = 420
Score = 34.3 bits (75), Expect = 0.18
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1
Query: 49 GLQEFGEASSASAYCRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDAT 228
G G +S S +C R G YP + + +W C NGV+ + C GL FD +
Sbjct: 360 GSSSSGGSSGGSGFCAVRAN------GLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDTS 413
>AL356387-9|CAI19266.1| 405|Homo sapiens eosinophil chemotactic
cytokine (CHIA) protein.
Length = 405
Score = 34.3 bits (75), Expect = 0.18
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1
Query: 49 GLQEFGEASSASAYCRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDAT 228
G G +S S +C R G YP + + +W C NGV+ + C GL FD +
Sbjct: 345 GSSSSGGSSGGSGFCAVRAN------GLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDTS 398
>AL356387-8|CAI19265.1| 476|Homo sapiens eosinophil chemotactic
cytokine (CHIA) protein.
Length = 476
Score = 34.3 bits (75), Expect = 0.18
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1
Query: 49 GLQEFGEASSASAYCRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDAT 228
G G +S S +C R G YP + + +W C NGV+ + C GL FD +
Sbjct: 416 GSSSSGGSSGGSGFCAVRAN------GLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDTS 469
>AL356387-6|CAI19263.1| 420|Homo sapiens eosinophil chemotactic
cytokine (CHIA) protein.
Length = 420
Score = 34.3 bits (75), Expect = 0.18
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1
Query: 49 GLQEFGEASSASAYCRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDAT 228
G G +S S +C R G YP + + +W C NGV+ + C GL FD +
Sbjct: 360 GSSSSGGSSGGSGFCAVRAN------GLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDTS 413
>AF290004-1|AAG60019.1| 476|Homo sapiens acidic mammalian chitinase
precursor protein.
Length = 476
Score = 34.3 bits (75), Expect = 0.18
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1
Query: 49 GLQEFGEASSASAYCRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDAT 228
G G +S S +C R G YP + + +W C NGV+ + C GL FD +
Sbjct: 416 GSSSSGGSSGGSGFCAVRAN------GLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDTS 469
>AB025009-1|BAA86981.1| 315|Homo sapiens novel member of chitinase
family protein.
Length = 315
Score = 34.3 bits (75), Expect = 0.18
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1
Query: 49 GLQEFGEASSASAYCRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDAT 228
G G +S S +C R G YP + + +W C NGV+ + C GL FD +
Sbjct: 255 GSSSSGGSSGGSGFCAGRAN------GLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDTS 308
>AB025008-1|BAA86980.1| 368|Homo sapiens novel member of chitinase
family protein.
Length = 368
Score = 34.3 bits (75), Expect = 0.18
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +1
Query: 49 GLQEFGEASSASAYCRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDAT 228
G G +S S +C R G YP + + +W C NGV+ + C GL FD +
Sbjct: 308 GSSSSGGSSGGSGFCAGRAN------GLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDTS 361
>X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific
proteoglycan (600 AA) protein.
Length = 600
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 211 DHCRMFSIRKHRYHTSSIYRMRCGEGRSRSHL 116
+H R F +K RY +S+ R +C EG + H+
Sbjct: 524 EHARTFGQKKDRYEINSLVRYQCTEGFVQRHM 555
>J05062-1|AAA35726.1| 480|Homo sapiens protein ( Human
cartilage-specific proteoglycan core protein (CSPCP)
mRNA, 3' end. ).
Length = 480
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 211 DHCRMFSIRKHRYHTSSIYRMRCGEGRSRSHL 116
+H R F +K RY +S+ R +C EG + H+
Sbjct: 404 EHARTFGQKKDRYEINSLVRYQCTEGFVQRHM 435
>Z98884-5|CAI21436.1| 1201|Homo sapiens period homolog 3
(Drosophila) protein.
Length = 1201
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 314 LLTAQDCTVSSPMKPSATC-FWNCWNGEASRYQCSP 418
LL QD V A FWN W A+RY+C+P
Sbjct: 170 LLAPQDMRVFYAHTARAQLPFWNNWTQRAARYECAP 205
>Z98884-3|CAI21434.1| 378|Homo sapiens period homolog 3
(Drosophila) protein.
Length = 378
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 314 LLTAQDCTVSSPMKPSATC-FWNCWNGEASRYQCSP 418
LL QD V A FWN W A+RY+C+P
Sbjct: 170 LLAPQDMRVFYAHTARAQLPFWNNWTQRAARYECAP 205
>EF015893-1|ABM64204.1| 1201|Homo sapiens period 3 protein.
Length = 1201
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 314 LLTAQDCTVSSPMKPSATC-FWNCWNGEASRYQCSP 418
LL QD V A FWN W A+RY+C+P
Sbjct: 170 LLAPQDMRVFYAHTARAQLPFWNNWTQRAARYECAP 205
>BC026102-1|AAH26102.1| 378|Homo sapiens PER3 protein protein.
Length = 378
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 314 LLTAQDCTVSSPMKPSATC-FWNCWNGEASRYQCSP 418
LL QD V A FWN W A+RY+C+P
Sbjct: 170 LLAPQDMRVFYAHTARAQLPFWNNWTQRAARYECAP 205
>AY493418-1|AAS72879.1| 1201|Homo sapiens growth-inhibiting protein
13 protein.
Length = 1201
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 314 LLTAQDCTVSSPMKPSATC-FWNCWNGEASRYQCSP 418
LL QD V A FWN W A+RY+C+P
Sbjct: 170 LLAPQDMRVFYAHTARAQLPFWNNWTQRAARYECAP 205
>AL157954-1|CAB76084.1| 1201|Homo sapiens hypothetical protein
protein.
Length = 1201
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 314 LLTAQDCTVSSPMKPSATC-FWNCWNGEASRYQCSP 418
LL QD V A FWN W A+RY+C+P
Sbjct: 170 LLAPQDMRVFYAHTARAQLPFWNNWTQRAARYECAP 205
>AF283408-1|AAL38109.1| 1537|Homo sapiens candidate tumor suppressor
protein protein.
Length = 1537
Score = 29.1 bits (62), Expect = 6.7
Identities = 23/101 (22%), Positives = 36/101 (35%), Gaps = 9/101 (8%)
Frame = +1
Query: 49 GLQEFGEASSASAYCRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDAT 228
GL E ++ + C + C P H CD C +G EL T G
Sbjct: 72 GLDE-SDSICGAITCAADMFSCQGSRACVPRHWLCDGERDCPDGSDELSTAGCAPNNTCD 130
Query: 229 DSKYLTEN---------CDYLHNVECGERTQLEPPITTPHC 324
++ ++ N CD H+ +CG+ + P C
Sbjct: 131 ENAFMCHNKVCIPKQFVCD--HDDDCGDGSDESPQCGYRQC 169
>AF176832-1|AAF70379.1| 4599|Homo sapiens low density lipoprotein
receptor related protein-deleted in tumor protein.
Length = 4599
Score = 29.1 bits (62), Expect = 6.7
Identities = 23/101 (22%), Positives = 36/101 (35%), Gaps = 9/101 (8%)
Frame = +1
Query: 49 GLQEFGEASSASAYCRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDAT 228
GL E ++ + C + C P H CD C +G EL T G
Sbjct: 2748 GLDE-SDSICGAITCAADMFSCQGSRACVPRHWLCDGERDCPDGSDELSTAGCAPNNTCD 2806
Query: 229 DSKYLTEN---------CDYLHNVECGERTQLEPPITTPHC 324
++ ++ N CD H+ +CG+ + P C
Sbjct: 2807 ENAFMCHNKVCIPKQFVCD--HDDDCGDGSDESPQCGYRQC 2845
>AC093039-1|AAX88911.1| 425|Homo sapiens unknown protein.
Length = 425
Score = 29.1 bits (62), Expect = 6.7
Identities = 23/101 (22%), Positives = 36/101 (35%), Gaps = 9/101 (8%)
Frame = +1
Query: 49 GLQEFGEASSASAYCRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDAT 228
GL E ++ + C + C P H CD C +G EL T G
Sbjct: 31 GLDE-SDSICGAITCAADMFSCQGSRACVPRHWLCDGERDCPDGSDELSTAGCAPNNTCD 89
Query: 229 DSKYLTEN---------CDYLHNVECGERTQLEPPITTPHC 324
++ ++ N CD H+ +CG+ + P C
Sbjct: 90 ENAFMCHNKVCIPKQFVCD--HDDDCGDGSDESPQCGYRQC 128
>X13916-1|CAA32112.1| 4544|Homo sapiens LDL-receptor related precursor
(AA -19 to 4525) protein.
Length = 4544
Score = 28.7 bits (61), Expect = 8.8
Identities = 24/106 (22%), Positives = 37/106 (34%), Gaps = 14/106 (13%)
Frame = +1
Query: 49 GLQEFGEASSASAYCR-----PRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGL 213
G + G+ S +A+C P CP P CD C +G E G
Sbjct: 2755 GSDDCGDGSDEAAHCEGKTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESIAAGCLY 2814
Query: 214 AFDATDSKYLTEN---------CDYLHNVECGERTQLEPPITTPHC 324
D +++ +N CD H+ +C + + P P C
Sbjct: 2815 NSTCDDREFMCQNRQCIPKHFVCD--HDRDCADGSDESPECEYPTC 2858
>DQ314873-1|ABC40732.1| 4544|Homo sapiens low density
lipoprotein-related protein 1 (alpha-2-macroglobulin
receptor) protein.
Length = 4544
Score = 28.7 bits (61), Expect = 8.8
Identities = 24/106 (22%), Positives = 37/106 (34%), Gaps = 14/106 (13%)
Frame = +1
Query: 49 GLQEFGEASSASAYCR-----PRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGL 213
G + G+ S +A+C P CP P CD C +G E G
Sbjct: 2755 GSDDCGDGSDEAAHCEGKTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESIAAGCLY 2814
Query: 214 AFDATDSKYLTEN---------CDYLHNVECGERTQLEPPITTPHC 324
D +++ +N CD H+ +C + + P P C
Sbjct: 2815 NSTCDDREFMCQNRQCIPKHFVCD--HDRDCADGSDESPECEYPTC 2858
>BC116455-1|AAI16456.1| 125|Homo sapiens chromosome 1 open reading
frame 31 protein.
Length = 125
Score = 28.7 bits (61), Expect = 8.8
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Frame = +1
Query: 154 DKYWKC-DNGVSELKTCGN-GLAFDATDS----KYLTENCDYLHNVECGERTQLEPPITT 315
D+YWKC D + + C +F+++ KY + DYL E E Q EP TT
Sbjct: 63 DEYWKCLDENLEDASQCKKLRSSFESSCPQQWIKYFDKRRDYLKFKEKFEAGQFEPSETT 122
>BC025793-1|AAH25793.1| 106|Homo sapiens C1orf31 protein protein.
Length = 106
Score = 28.7 bits (61), Expect = 8.8
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Frame = +1
Query: 154 DKYWKC-DNGVSELKTCGN-GLAFDATDS----KYLTENCDYLHNVECGERTQLEPPITT 315
D+YWKC D + + C +F+++ KY + DYL E E Q EP TT
Sbjct: 44 DEYWKCLDENLEDASQCKKLRSSFESSCPQQWIKYFDKRRDYLKFKEKFEAGQFEPSETT 103
>AL355472-4|CAI22930.1| 79|Homo sapiens novel protein protein.
Length = 79
Score = 28.7 bits (61), Expect = 8.8
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Frame = +1
Query: 154 DKYWKC-DNGVSELKTCGN-GLAFDATDS----KYLTENCDYLHNVECGERTQLEPPITT 315
D+YWKC D + + C +F+++ KY + DYL E E Q EP TT
Sbjct: 17 DEYWKCLDENLEDASQCKKLRSSFESSCPQQWIKYFDKRRDYLKFKEKFEAGQFEPSETT 76
>AL355472-3|CAI22929.1| 125|Homo sapiens novel protein protein.
Length = 125
Score = 28.7 bits (61), Expect = 8.8
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Frame = +1
Query: 154 DKYWKC-DNGVSELKTCGN-GLAFDATDS----KYLTENCDYLHNVECGERTQLEPPITT 315
D+YWKC D + + C +F+++ KY + DYL E E Q EP TT
Sbjct: 63 DEYWKCLDENLEDASQCKKLRSSFESSCPQQWIKYFDKRRDYLKFKEKFEAGQFEPSETT 122
>AL355472-2|CAI22928.1| 155|Homo sapiens novel protein protein.
Length = 155
Score = 28.7 bits (61), Expect = 8.8
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Frame = +1
Query: 154 DKYWKC-DNGVSELKTCGN-GLAFDATDS----KYLTENCDYLHNVECGERTQLEPPITT 315
D+YWKC D + + C +F+++ KY + DYL E E Q EP TT
Sbjct: 93 DEYWKCLDENLEDASQCKKLRSSFESSCPQQWIKYFDKRRDYLKFKEKFEAGQFEPSETT 152
>AF058427-1|AAC64265.1| 4544|Homo sapiens lipoprotein receptor-related
protein protein.
Length = 4544
Score = 28.7 bits (61), Expect = 8.8
Identities = 24/106 (22%), Positives = 37/106 (34%), Gaps = 14/106 (13%)
Frame = +1
Query: 49 GLQEFGEASSASAYCR-----PRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGL 213
G + G+ S +A+C P CP P CD C +G E G
Sbjct: 2755 GSDDCGDGSDEAAHCEGKTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESIAAGCLY 2814
Query: 214 AFDATDSKYLTEN---------CDYLHNVECGERTQLEPPITTPHC 324
D +++ +N CD H+ +C + + P P C
Sbjct: 2815 NSTCDDREFMCQNRQCIPKHFVCD--HDRDCADGSDESPECEYPTC 2858
>AB209498-1|BAD92735.1| 2359|Homo sapiens low density
lipoprotein-related protein 1 variant protein.
Length = 2359
Score = 28.7 bits (61), Expect = 8.8
Identities = 24/106 (22%), Positives = 37/106 (34%), Gaps = 14/106 (13%)
Frame = +1
Query: 49 GLQEFGEASSASAYCR-----PRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGL 213
G + G+ S +A+C P CP P CD C +G E G
Sbjct: 571 GSDDCGDGSDEAAHCEGKTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESIAAGCLY 630
Query: 214 AFDATDSKYLTEN---------CDYLHNVECGERTQLEPPITTPHC 324
D +++ +N CD H+ +C + + P P C
Sbjct: 631 NSTCDDREFMCQNRQCIPKHFVCD--HDRDCADGSDESPECEYPTC 674
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,720,632
Number of Sequences: 237096
Number of extensions: 1382328
Number of successful extensions: 3255
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 3137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3251
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3373625546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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