Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_M10
(428 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 38 0.002
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 34 0.050
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 33 0.087
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 31 0.35
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 30 0.81
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 30 0.81
AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical ... 29 1.1
Z35598-5|CAA84652.1| 628|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z37983-7|CAA86058.1| 1106|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z81133-3|CAB03443.3| 527|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z74037-5|CAA98493.3| 509|Caenorhabditis elegans Hypothetical pr... 27 4.3
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 27 4.3
AB044562-1|BAA96734.1| 509|Caenorhabditis elegans MIG-17 protein. 27 4.3
Z35598-3|CAA84655.3| 525|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z82060-1|CAB04881.2| 448|Caenorhabditis elegans Hypothetical pr... 27 7.5
U41992-3|AAL02507.1| 134|Caenorhabditis elegans Hypothetical pr... 27 7.5
U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical pr... 27 7.5
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 27 7.5
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 27 7.5
Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical pr... 26 10.0
X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein. 26 10.0
U53333-12|AAA96165.1| 387|Caenorhabditis elegans Nuclear hormon... 26 10.0
U10438-6|AAA19087.1| 429|Caenorhabditis elegans Hypothetical pr... 26 10.0
AC084197-45|AAK68589.4| 751|Caenorhabditis elegans Hypothetical... 26 10.0
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 26 10.0
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical
protein H02I12.1 protein.
Length = 1319
Score = 38.3 bits (85), Expect = 0.002
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 157 KYWKCDNGVSELKTCGNGLAFDATDSKYLTENCDYLHNV-ECGER-TQLEPPITTP---H 321
KY +C NG + ++ CG L F+ T+ C Y V ECG + + P ITTP
Sbjct: 707 KYIQCSNGAAIVRRCGESLYFNEA-----TQECTYRDEVPECGSQGSTSSPVITTPGQDQ 761
Query: 322 CTRLYGIFPDE 354
+ YGI D+
Sbjct: 762 SSNYYGIPSDD 772
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 33.9 bits (74), Expect = 0.050
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 109 KCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDA 225
KC D GF+ C K+ +C NG+S C NGL+F A
Sbjct: 565 KCTKD-GFFGVPSDCLKFIRCVNGISYNFECPNGLSFHA 602
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 33.1 bits (72), Expect = 0.087
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 70 ASSASAYCRPRIIKCPDDFGFYPHHISCD-KYWKCDNGVSELKTCGNGLAFD 222
++ A P+ CPD G Y + C KY +C N V ++C GL FD
Sbjct: 29 SADAKNVLNPKGPPCPDGDGLYA--VGCSSKYLQCVNNVEYEQSCPEGLYFD 78
Score = 28.3 bits (60), Expect = 2.5
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +1
Query: 133 YPHHISCDKY-WKCDNGVSELKTCGNGLAFDATDSKYLTEN-CDYLHNV-ECGERTQLEP 303
+ ++ C Y W+C NG KTC L + L +N CD+ +V +C E E
Sbjct: 211 FTDNVKCSPYFWQCSNGKLFRKTCPEKLIY------VLDQNLCDFPESVKDCPEYNGSET 264
Query: 304 PITTPHCT 327
P T
Sbjct: 265 SYRAPKTT 272
Score = 27.1 bits (57), Expect = 5.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 124 FGFYPHHISCDKYWKCDNGVSELKTCGNGLAFD 222
FG H S + CDNGV + C + L FD
Sbjct: 360 FGIKECHAS---FLSCDNGVGRVIQCADNLVFD 389
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 31.1 bits (67), Expect = 0.35
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Frame = +1
Query: 49 GLQEFGEASSASAYCR---PRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAF 219
G FG SS+ + C P ++ CPD F + CD W D +L++ G +
Sbjct: 244 GYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDE--CDLESSGFMENY 301
Query: 220 DATDSKYLTENCDY-LHNVECGER 288
A+++ N D L+ ++C R
Sbjct: 302 KASEALTPCTNMDNGLYALDCTPR 325
Score = 26.2 bits (55), Expect = 10.0
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +1
Query: 112 CPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDATDSKYLTENCDYLHNV-EC 279
C + G++ + C NG+ + C +GL F + + CDY NV EC
Sbjct: 239 CGEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKN-----QMCDYEWNVDEC 290
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 29.9 bits (64), Expect = 0.81
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 127 GFYPHHISCDKYWKCDNGVSELKTCGNGLAFDATDSKYLTENCDYLHNV-EC 279
GFY D Y C NG C LAFD +++ + CDY+ NV EC
Sbjct: 220 GFYSFGECSDHYTACSNGYLIPMQCPARLAFD--EARVI---CDYVMNVPEC 266
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 29.9 bits (64), Expect = 0.81
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 127 GFYPHHISCDKYWKCDNGVSELKTCGNGLAFDATDSKYLTENCDYLHNV-EC 279
GFY D Y C NG C LAFD +++ + CDY+ NV EC
Sbjct: 220 GFYSFGECSDHYTACSNGYLIPMQCPARLAFD--EARVI---CDYVMNVPEC 266
>AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical
protein W03F11.1 protein.
Length = 235
Score = 29.5 bits (63), Expect = 1.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 142 HISCDKYWKCDNGVSELKTCGNGLAFDAT 228
H +K+WKC+ G + TC +DAT
Sbjct: 29 HFDSNKFWKCEGGRWIVVTCQINYFYDAT 57
Score = 29.1 bits (62), Expect = 1.4
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = +1
Query: 127 GFYPHHISCDKYWKCDNGVSELKTCGNGLAFD 222
G+ P +C +++C +G+ ++CG G +D
Sbjct: 164 GYKPDVYNCKNFYQCASGLWTQRSCGEGTIWD 195
>Z35598-5|CAA84652.1| 628|Caenorhabditis elegans Hypothetical
protein F10F2.7 protein.
Length = 628
Score = 28.3 bits (60), Expect = 2.5
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 9/61 (14%)
Frame = +1
Query: 7 SWSSTGRRSKLVDPGLQEFGEASSASAYCRPRI-----IKCPDDFGFYPHHIS----CDK 159
+WSS S+ + GL+ +A A YC + KCP+ F +P S C K
Sbjct: 395 TWSSAAVLSRDSNRGLEAMSDARYAPLYCENILEYFSYSKCPEGFSEFPRVTSGQRWCHK 454
Query: 160 Y 162
Y
Sbjct: 455 Y 455
>Z37983-7|CAA86058.1| 1106|Caenorhabditis elegans Hypothetical
protein B0393.5 protein.
Length = 1106
Score = 27.9 bits (59), Expect = 3.3
Identities = 22/79 (27%), Positives = 33/79 (41%)
Frame = +1
Query: 151 CDKYWKCDNGVSELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQLEPPITTPHCTR 330
CD+ KC NGV TC G D Y + C+ + C + + I + CT
Sbjct: 376 CDQNAKCSNGVC---TCSEGFTGDGFRC-YDVDECE-IPGAVCRDHSICSNTIGSFECTC 430
Query: 331 LYGIFPDETKCDVLLELLE 387
G ++ KC+ + E E
Sbjct: 431 HGGYRFEDGKCEDVDECRE 449
>Z81133-3|CAB03443.3| 527|Caenorhabditis elegans Hypothetical
protein T28B8.5 protein.
Length = 527
Score = 27.5 bits (58), Expect = 4.3
Identities = 22/78 (28%), Positives = 33/78 (42%)
Frame = +1
Query: 67 EASSASAYCRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDATDSKYLT 246
EA S I C + Y H + +Y CDNGV +T N D +S T
Sbjct: 291 EACFRSCMQEKIIASCGCYYPAYSHASNTTQYVSCDNGV---QTLSNLNCVDLINSADST 347
Query: 247 ENCDYLHNVECGERTQLE 300
E D L + +C + +++
Sbjct: 348 E-FDVLTDCDCPQPCEID 364
>Z74037-5|CAA98493.3| 509|Caenorhabditis elegans Hypothetical
protein F57B7.4 protein.
Length = 509
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +1
Query: 97 PRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDATDSKY 240
P I C G++ C++ W D E +T AFD T+ Y
Sbjct: 404 PTFIPCLH-IGYFHEQSICERIWCSDGESDECQTLNYFPAFDGTECGY 450
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/48 (27%), Positives = 28/48 (58%), Gaps = 7/48 (14%)
Frame = +1
Query: 181 VSELKTCGNGLAFDATDSKYLTEN-----CDYLHNVE--CGERTQLEP 303
+ E +TCG+ ++F A KYL++ D + +++ C E ++++P
Sbjct: 69 IIECRTCGHSISFHAEPLKYLSQEDLDTYTDQISDLQTCCSELSEIDP 116
>AB044562-1|BAA96734.1| 509|Caenorhabditis elegans MIG-17 protein.
Length = 509
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +1
Query: 97 PRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDATDSKY 240
P I C G++ C++ W D E +T AFD T+ Y
Sbjct: 404 PTFIPCLH-IGYFHEQSICERIWCSDGESDECQTLNYFPAFDGTECGY 450
>Z35598-3|CAA84655.3| 525|Caenorhabditis elegans Hypothetical
protein F10F2.5 protein.
Length = 525
Score = 27.1 bits (57), Expect = 5.7
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Frame = +1
Query: 7 SWSSTGRRSKLVDPGLQEFGEASSASAYCRPRI-----IKCPDDFGFY 135
+WSS S+ + GL+ +A A YC + KCPD F Y
Sbjct: 327 TWSSAVVLSRRENEGLEVMSDARYAPIYCEQIVKGLSYTKCPDGFVEY 374
>Z82060-1|CAB04881.2| 448|Caenorhabditis elegans Hypothetical
protein T27F6.1 protein.
Length = 448
Score = 26.6 bits (56), Expect = 7.5
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 55 QEFGEASSASAYCRPRIIKCPDDFGFYPH 141
+EF E A A C P ++ PDD H
Sbjct: 162 KEFKERMQAMASCLPNVLLLPDDLSVDSH 190
>U41992-3|AAL02507.1| 134|Caenorhabditis elegans Hypothetical
protein F32E10.8 protein.
Length = 134
Score = 26.6 bits (56), Expect = 7.5
Identities = 15/55 (27%), Positives = 19/55 (34%)
Frame = +1
Query: 76 SASAYCRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSELKTCGNGLAFDATDSKY 240
S C +C D + CDKY C +G E + C L T Y
Sbjct: 80 SVGLKCPSFWFRCTDSSSCIAPNRVCDKYKDCRDGSDERENCNQPLGTPNTTVIY 134
>U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical
protein F20D12.2 protein.
Length = 1116
Score = 26.6 bits (56), Expect = 7.5
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -1
Query: 242 RYLESVASKARPLPHVFNSETPLSHFQ-YLSHEM 144
+Y S A + RPLPH SE ++ YL H +
Sbjct: 329 QYARSAADQERPLPHELRSEKIMNQTTCYLLHNV 362
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 26.6 bits (56), Expect = 7.5
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +1
Query: 91 CRPRIIKCPDDFGFYPHHISCDKYWKCDNGVSELK 195
C R KC D P H C+ +C +G E K
Sbjct: 456 CPSRSFKCSADKKCLPFHTRCNGVAECSDGSDEHK 490
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 26.6 bits (56), Expect = 7.5
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = +1
Query: 256 DYLHNVECGERTQLEPPITTPHCTRLYGIFPDETKCDVLLELLEW*SFPLPVQP 417
D VE GE L PP P R F DE +C EW P P P
Sbjct: 441 DQAIKVEEGEIETLRPPPYEPPSDRFEAEFADEPEC-------EWIRDPTPTPP 487
>Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical
protein F17E5.1a protein.
Length = 961
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 119 SGHLMILGRQYAEALLASPNSCSPGSTSLER 27
SG +LG A L PNS PGST+ ++
Sbjct: 367 SGAYKVLGSLDAINSLLDPNSYKPGSTTFQK 397
>X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein.
Length = 961
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 119 SGHLMILGRQYAEALLASPNSCSPGSTSLER 27
SG +LG A L PNS PGST+ ++
Sbjct: 367 SGAYKVLGSLDAINSLLDPNSYKPGSTTFQK 397
>U53333-12|AAA96165.1| 387|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 78 protein.
Length = 387
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 336 RYLPR*NQVRRASGTAGMVKLPATSAAPDLP 428
RYL + + R + TA ++ P TSA+P +P
Sbjct: 71 RYLVQSKKGRPDASTANGIENPTTSASPSIP 101
>U10438-6|AAA19087.1| 429|Caenorhabditis elegans Hypothetical
protein B0280.9 protein.
Length = 429
Score = 26.2 bits (55), Expect = 10.0
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 187 ELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQLEPPITTP-HCTRLYGIFPD 351
E+ G+ + ++ +YL + +N+E E TQL+PP T P RL+ I D
Sbjct: 172 EIADKGHSVICSSSRKEYLMQ-----YNMETREVTQLKPPNTVPKQGIRLFAISHD 222
>AC084197-45|AAK68589.4| 751|Caenorhabditis elegans Hypothetical
protein Y73B6BL.1 protein.
Length = 751
Score = 26.2 bits (55), Expect = 10.0
Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 10/81 (12%)
Frame = +1
Query: 115 PDDFGFYPHHISCDKYWKCDNGVSE----------LKTCGNGLAFDATDSKYLTENCDYL 264
P+D FY HH D W+ S+ K C + FD + +N D L
Sbjct: 295 PNDPTFYMHHAFIDNLWEKFRQNSQTREERENQWATKNCNDNHGFDVQMKPFTIQNRDGL 354
Query: 265 HNVECGERTQLEPPITTPHCT 327
N E + +P HC+
Sbjct: 355 SNQYTDEWYEYQP---VRHCS 372
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 95 AQESSNAQMTSASTLTTSHAINTGS 169
+Q ++ + MTSA +T+S + NTGS
Sbjct: 643 SQSTAGSTMTSAPPVTSSSSANTGS 667
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,124,450
Number of Sequences: 27780
Number of extensions: 208336
Number of successful extensions: 696
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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