Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_M09
(576 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 285 6e-77
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 285 6e-77
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 285 6e-77
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 285 6e-77
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 285 6e-77
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 285 6e-77
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 285 6e-77
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 285 6e-77
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 285 6e-77
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 285 6e-77
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 285 6e-77
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 285 6e-77
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 285 6e-77
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 285 6e-77
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 284 2e-76
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 282 5e-76
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 279 7e-75
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 155 1e-37
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 146 5e-35
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 128 1e-29
AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0 pr... 49 1e-05
BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog... 45 2e-04
BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog... 45 2e-04
AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protei... 45 2e-04
AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolo... 45 2e-04
AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens ... 45 2e-04
AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal pr... 44 4e-04
BC053670-1|AAH53670.1| 568|Homo sapiens CES3 protein protein. 34 0.41
AY358609-1|AAQ88972.1| 571|Homo sapiens carboxylesterase Hlo pr... 34 0.41
AK097538-1|BAC05093.1| 207|Homo sapiens protein ( Homo sapiens ... 34 0.41
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 31 2.2
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 31 2.2
BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein. 31 2.2
AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alph... 31 2.2
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 31 2.2
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 31 2.2
AF088439-1|AAD29537.1| 42|Homo sapiens T-cell receptor beta ch... 31 3.8
AF051099-1|AAD15786.1| 217|Homo sapiens immunoglobulin G kappa ... 31 3.8
EF567077-1|ABQ63084.1| 1328|Homo sapiens Fanconi anemia compleme... 29 8.9
EF469766-1|ABP88002.1| 1328|Homo sapiens Fanconi anemia compleme... 29 8.9
AK027564-1|BAB55200.1| 906|Homo sapiens protein ( Homo sapiens ... 29 8.9
AK001581-1|BAA91770.1| 1084|Homo sapiens protein ( Homo sapiens ... 29 8.9
AF088442-1|AAD29539.1| 43|Homo sapiens T-cell receptor beta ch... 29 8.9
AB058697-1|BAB47423.1| 802|Homo sapiens KIAA1794 protein protein. 29 8.9
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 285 bits (700), Expect = 6e-77
Identities = 134/187 (71%), Positives = 157/187 (83%)
Frame = +2
Query: 11 MMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 190
MMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 60 MMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPC 119
Query: 191 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 370
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLN
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLN 179
Query: 371 ISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPH 550
ISPFS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PH
Sbjct: 180 ISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPH 239
Query: 551 SIANGFK 571
SI NG+K
Sbjct: 240 SIINGYK 246
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 285 bits (700), Expect = 6e-77
Identities = 134/187 (71%), Positives = 157/187 (83%)
Frame = +2
Query: 11 MMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 190
MMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 60 MMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPC 119
Query: 191 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 370
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLN
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLN 179
Query: 371 ISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPH 550
ISPFS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PH
Sbjct: 180 ISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPH 239
Query: 551 SIANGFK 571
SI NG+K
Sbjct: 240 SIINGYK 246
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 285 bits (700), Expect = 6e-77
Identities = 134/187 (71%), Positives = 157/187 (83%)
Frame = +2
Query: 11 MMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 190
MMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 60 MMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPC 119
Query: 191 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 370
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLN
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLN 179
Query: 371 ISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPH 550
ISPFS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PH
Sbjct: 180 ISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPH 239
Query: 551 SIANGFK 571
SI NG+K
Sbjct: 240 SIINGYK 246
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 285 bits (700), Expect = 6e-77
Identities = 134/187 (71%), Positives = 157/187 (83%)
Frame = +2
Query: 11 MMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 190
MMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 60 MMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPC 119
Query: 191 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 370
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLN
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLN 179
Query: 371 ISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPH 550
ISPFS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PH
Sbjct: 180 ISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPH 239
Query: 551 SIANGFK 571
SI NG+K
Sbjct: 240 SIINGYK 246
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 285 bits (700), Expect = 6e-77
Identities = 134/187 (71%), Positives = 157/187 (83%)
Frame = +2
Query: 11 MMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 190
MMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 60 MMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPC 119
Query: 191 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 370
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLN
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLN 179
Query: 371 ISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPH 550
ISPFS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PH
Sbjct: 180 ISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPH 239
Query: 551 SIANGFK 571
SI NG+K
Sbjct: 240 SIINGYK 246
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 285 bits (700), Expect = 6e-77
Identities = 134/187 (71%), Positives = 157/187 (83%)
Frame = +2
Query: 11 MMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 190
MMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 60 MMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPC 119
Query: 191 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 370
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLN
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLN 179
Query: 371 ISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPH 550
ISPFS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PH
Sbjct: 180 ISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPH 239
Query: 551 SIANGFK 571
SI NG+K
Sbjct: 240 SIINGYK 246
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 285 bits (700), Expect = 6e-77
Identities = 134/187 (71%), Positives = 157/187 (83%)
Frame = +2
Query: 11 MMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 190
MMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 60 MMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPC 119
Query: 191 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 370
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLN
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLN 179
Query: 371 ISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPH 550
ISPFS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PH
Sbjct: 180 ISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPH 239
Query: 551 SIANGFK 571
SI NG+K
Sbjct: 240 SIINGYK 246
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 285 bits (700), Expect = 6e-77
Identities = 134/187 (71%), Positives = 157/187 (83%)
Frame = +2
Query: 11 MMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 190
MMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 60 MMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPC 119
Query: 191 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 370
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLN
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLN 179
Query: 371 ISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPH 550
ISPFS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PH
Sbjct: 180 ISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPH 239
Query: 551 SIANGFK 571
SI NG+K
Sbjct: 240 SIINGYK 246
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 285 bits (700), Expect = 6e-77
Identities = 134/187 (71%), Positives = 157/187 (83%)
Frame = +2
Query: 11 MMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 190
MMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 60 MMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPC 119
Query: 191 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 370
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLN
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLN 179
Query: 371 ISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPH 550
ISPFS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PH
Sbjct: 180 ISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPH 239
Query: 551 SIANGFK 571
SI NG+K
Sbjct: 240 SIINGYK 246
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 285 bits (700), Expect = 6e-77
Identities = 134/187 (71%), Positives = 157/187 (83%)
Frame = +2
Query: 11 MMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 190
MMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 60 MMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPC 119
Query: 191 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 370
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLN
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLN 179
Query: 371 ISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPH 550
ISPFS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PH
Sbjct: 180 ISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPH 239
Query: 551 SIANGFK 571
SI NG+K
Sbjct: 240 SIINGYK 246
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 285 bits (700), Expect = 6e-77
Identities = 134/187 (71%), Positives = 157/187 (83%)
Frame = +2
Query: 11 MMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 190
MMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 60 MMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPC 119
Query: 191 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 370
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLN
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLN 179
Query: 371 ISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPH 550
ISPFS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PH
Sbjct: 180 ISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPH 239
Query: 551 SIANGFK 571
SI NG+K
Sbjct: 240 SIINGYK 246
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 285 bits (700), Expect = 6e-77
Identities = 134/187 (71%), Positives = 157/187 (83%)
Frame = +2
Query: 11 MMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 190
MMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 60 MMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPC 119
Query: 191 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 370
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLN
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLN 179
Query: 371 ISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPH 550
ISPFS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PH
Sbjct: 180 ISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPH 239
Query: 551 SIANGFK 571
SI NG+K
Sbjct: 240 SIINGYK 246
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 285 bits (700), Expect = 6e-77
Identities = 134/187 (71%), Positives = 157/187 (83%)
Frame = +2
Query: 11 MMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 190
MMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 60 MMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPC 119
Query: 191 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 370
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLN
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLN 179
Query: 371 ISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPH 550
ISPFS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PH
Sbjct: 180 ISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPH 239
Query: 551 SIANGFK 571
SI NG+K
Sbjct: 240 SIINGYK 246
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 285 bits (700), Expect = 6e-77
Identities = 134/187 (71%), Positives = 157/187 (83%)
Frame = +2
Query: 11 MMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 190
MMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 60 MMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPC 119
Query: 191 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 370
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLN
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLN 179
Query: 371 ISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPH 550
ISPFS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PH
Sbjct: 180 ISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPH 239
Query: 551 SIANGFK 571
SI NG+K
Sbjct: 240 SIINGYK 246
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 284 bits (696), Expect = 2e-76
Identities = 133/187 (71%), Positives = 157/187 (83%)
Frame = +2
Query: 11 MMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 190
MMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 60 MMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPC 119
Query: 191 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 370
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLN
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLN 179
Query: 371 ISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPH 550
ISPFS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PH
Sbjct: 180 ISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPH 239
Query: 551 SIANGFK 571
SI NG++
Sbjct: 240 SIINGYE 246
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 282 bits (692), Expect = 5e-76
Identities = 133/187 (71%), Positives = 156/187 (83%)
Frame = +2
Query: 11 MMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 190
MMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 60 MMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPC 119
Query: 191 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 370
V +PA NTGLGPEKTSF QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLN
Sbjct: 120 EVTVPAQNTGLGPEKTSFSQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLN 179
Query: 371 ISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPH 550
ISPFS+GLV++QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PH
Sbjct: 180 ISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPH 239
Query: 551 SIANGFK 571
SI NG+K
Sbjct: 240 SIINGYK 246
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 279 bits (683), Expect = 7e-75
Identities = 132/187 (70%), Positives = 154/187 (82%)
Frame = +2
Query: 11 MMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 190
MMRKAI+ HLE NPALEKLLPHI GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 60 MMRKAIRGHLENNPALEKLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPC 119
Query: 191 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 370
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLN
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLN 179
Query: 371 ISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPH 550
ISPFS+GLV++QV+D+G+I+ P +LD E L +FL GV NVA++ L GYPTVAS PH
Sbjct: 180 ISPFSFGLVIQQVFDNGSIYNPEVLDKTEETLHSRFLEGVRNVASVCLQTGYPTVASVPH 239
Query: 551 SIANGFK 571
SI NG+K
Sbjct: 240 SIINGYK 246
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 155 bits (375), Expect = 1e-37
Identities = 73/96 (76%), Positives = 81/96 (84%)
Frame = +2
Query: 11 MMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 190
MMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 60 MMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPC 119
Query: 191 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 298
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 155
Score = 49.2 bits (112), Expect = 1e-05
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +2
Query: 479 LAGVANVAALSLSIGYPTVASAPHSIANGFK 571
+ GV NVA++ L IGYPTVAS PHSI NG+K
Sbjct: 154 ILGVRNVASVCLQIGYPTVASVPHSIINGYK 184
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 146 bits (354), Expect = 5e-35
Identities = 71/96 (73%), Positives = 80/96 (83%)
Frame = +2
Query: 11 MMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPL 190
MMRKAI+ HLE NPALEKLLP ++GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 60 MMRKAIRGHLENNPALEKLLP-LRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPC 118
Query: 191 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 298
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 119 EVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 154
Score = 49.2 bits (112), Expect = 1e-05
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +2
Query: 479 LAGVANVAALSLSIGYPTVASAPHSIANGFK 571
+ GV NVA++ L IGYPTVAS PHSI NG+K
Sbjct: 153 ILGVRNVASVCLQIGYPTVASVPHSIINGYK 183
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 128 bits (310), Expect = 1e-29
Identities = 59/85 (69%), Positives = 71/85 (83%)
Frame = +2
Query: 317 KPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVAN 496
K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ P +LDI E L +FL GV N
Sbjct: 2 KTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRN 61
Query: 497 VAALSLSIGYPTVASAPHSIANGFK 571
VA++ L IGYPTVAS PHSI NG+K
Sbjct: 62 VASVCLQIGYPTVASVPHSIINGYK 86
>AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0
protein.
Length = 93
Score = 48.8 bits (111), Expect = 1e-05
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +2
Query: 485 GVANVAALSLSIGYPTVASAPHSIANGFK 571
GV NVA++ L IGYPTVAS PHSI NG+K
Sbjct: 1 GVRNVASVCLQIGYPTVASVPHSIINGYK 29
>BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 44.8 bits (101), Expect = 2e-04
Identities = 30/140 (21%), Positives = 60/140 (42%), Gaps = 1/140 (0%)
Frame = +2
Query: 56 LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 235
L ++ ++G VG +FT +V + + AR G A +V + P
Sbjct: 89 LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDPGPLEQFPHS 148
Query: 236 TS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 412
+ L +PT + +G + +++D + K GD + +A +L + + + +K ++
Sbjct: 149 MEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMW 208
Query: 413 DSGTIFAPAILDIKPEDLRE 472
DS + + D PE E
Sbjct: 209 DSQSGRFQQMGDDLPESASE 228
>BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 44.8 bits (101), Expect = 2e-04
Identities = 30/140 (21%), Positives = 60/140 (42%), Gaps = 1/140 (0%)
Frame = +2
Query: 56 LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 235
L ++ ++G VG +FT +V + + AR G A +V + P
Sbjct: 89 LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDPGPLEQFPHS 148
Query: 236 TS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 412
+ L +PT + +G + +++D + K GD + +A +L + + + +K ++
Sbjct: 149 MEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMW 208
Query: 413 DSGTIFAPAILDIKPEDLRE 472
DS + + D PE E
Sbjct: 209 DSQSGRFQQMGDDLPESASE 228
>AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protein
PO-like protein.
Length = 239
Score = 44.8 bits (101), Expect = 2e-04
Identities = 30/140 (21%), Positives = 60/140 (42%), Gaps = 1/140 (0%)
Frame = +2
Query: 56 LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 235
L ++ ++G VG +FT +V + + AR G A +V + P
Sbjct: 89 LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDPGPLEQFPHS 148
Query: 236 TS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 412
+ L +PT + +G + +++D + K GD + +A +L + + + +K ++
Sbjct: 149 MEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMW 208
Query: 413 DSGTIFAPAILDIKPEDLRE 472
DS + + D PE E
Sbjct: 209 DSQSGRFQQMGDDLPESASE 228
>AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 44.8 bits (101), Expect = 2e-04
Identities = 30/140 (21%), Positives = 60/140 (42%), Gaps = 1/140 (0%)
Frame = +2
Query: 56 LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 235
L ++ ++G VG +FT +V + + AR G A +V + P
Sbjct: 89 LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDPGPLEQFPHS 148
Query: 236 TS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 412
+ L +PT + +G + +++D + K GD + +A +L + + + +K ++
Sbjct: 149 MEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMW 208
Query: 413 DSGTIFAPAILDIKPEDLRE 472
DS + + D PE E
Sbjct: 209 DSQSGRFQQMGDDLPESASE 228
>AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens
cDNA FLJ14663 fis, clone NT2RP2002862, weakly similar to
60S ACIDIC RIBOSOMAL PROTEIN P0. ).
Length = 239
Score = 44.8 bits (101), Expect = 2e-04
Identities = 30/140 (21%), Positives = 60/140 (42%), Gaps = 1/140 (0%)
Frame = +2
Query: 56 LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 235
L ++ ++G VG +FT +V + + AR G A +V + P
Sbjct: 89 LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDPGPLEQFPHS 148
Query: 236 TS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 412
+ L +PT + +G + +++D + K GD + +A +L + + + +K ++
Sbjct: 149 MEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMW 208
Query: 413 DSGTIFAPAILDIKPEDLRE 472
DS + + D PE E
Sbjct: 209 DSQSGRFQQMGDDLPESASE 228
>AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal
protein PO protein.
Length = 239
Score = 44.0 bits (99), Expect = 4e-04
Identities = 30/140 (21%), Positives = 60/140 (42%), Gaps = 1/140 (0%)
Frame = +2
Query: 56 LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 235
L ++ ++G VG +FT +V + + AR G A +V + P
Sbjct: 89 LHQVSKTLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDPGPLEQFPHS 148
Query: 236 TS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 412
+ L +PT + +G + +++D + K GD + +A +L + + + +K ++
Sbjct: 149 MEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMW 208
Query: 413 DSGTIFAPAILDIKPEDLRE 472
DS + + D PE E
Sbjct: 209 DSQSGRFQQMGDDLPESASE 228
>BC053670-1|AAH53670.1| 568|Homo sapiens CES3 protein protein.
Length = 568
Score = 33.9 bits (74), Expect = 0.41
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +2
Query: 335 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSL 514
G++ ++++ L +SP + GL + + SG I P I+D P L +K +AN A S
Sbjct: 228 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACSS 283
Query: 515 S 517
S
Sbjct: 284 S 284
>AY358609-1|AAQ88972.1| 571|Homo sapiens carboxylesterase Hlo
protein.
Length = 571
Score = 33.9 bits (74), Expect = 0.41
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +2
Query: 335 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSL 514
G++ ++++ L +SP + GL + + SG I P I+D P L +K +AN A S
Sbjct: 228 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACSS 283
Query: 515 S 517
S
Sbjct: 284 S 284
>AK097538-1|BAC05093.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ40219 fis, clone TESTI2021637, moderately
similar to LIVER CARBOXYLESTERASE PRECURSOR (EC
3.1.1.1). ).
Length = 207
Score = 33.9 bits (74), Expect = 0.41
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +2
Query: 335 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSL 514
G++ ++++ L +SP + GL + + SG I P I+D P L +K +AN A S
Sbjct: 85 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACSS 140
Query: 515 S 517
S
Sbjct: 141 S 141
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 31.5 bits (68), Expect = 2.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 426 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 298
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 238 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 31.5 bits (68), Expect = 2.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 426 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 298
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 273 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 315
>BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein.
Length = 393
Score = 31.5 bits (68), Expect = 2.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 426 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 298
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 238 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alpha 1
protein.
Length = 417
Score = 31.5 bits (68), Expect = 2.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 426 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 298
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 238 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 31.5 bits (68), Expect = 2.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 426 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 298
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 238 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 31.5 bits (68), Expect = 2.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 426 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 298
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 238 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AF088439-1|AAD29537.1| 42|Homo sapiens T-cell receptor beta chain
protein.
Length = 42
Score = 30.7 bits (66), Expect = 3.8
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 397 CQTGVRLRYHLRAGNSRHQAGGPSREVP 480
CQ RLR LRAG+ H GP + VP
Sbjct: 14 CQHSSRLRAVLRAGHQAHGHRGPEKRVP 41
>AF051099-1|AAD15786.1| 217|Homo sapiens immunoglobulin G kappa
chain protein.
Length = 217
Score = 30.7 bits (66), Expect = 3.8
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +2
Query: 374 SPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHS 553
SP+S+G K T+ AP++ P D E+ +G A+V L L+ YP A
Sbjct: 96 SPWSFGQGTKVEIKRTTVAAPSVFIFPPSD--EQLKSGTASVVCL-LNNFYPREAKVQWK 152
Query: 554 IANGFKN 574
+ N ++
Sbjct: 153 VDNALQS 159
>EF567077-1|ABQ63084.1| 1328|Homo sapiens Fanconi anemia
complementation group I protein.
Length = 1328
Score = 29.5 bits (63), Expect = 8.9
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 21 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 140
+P +L ++L C LT + ++L P++ LL C+ +C
Sbjct: 636 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 674
>EF469766-1|ABP88002.1| 1328|Homo sapiens Fanconi anemia
complementation group I isoform 3 protein.
Length = 1328
Score = 29.5 bits (63), Expect = 8.9
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 21 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 140
+P +L ++L C LT + ++L P++ LL C+ +C
Sbjct: 636 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 674
>AK027564-1|BAB55200.1| 906|Homo sapiens protein ( Homo sapiens
cDNA FLJ14658 fis, clone NT2RP2002549. ).
Length = 906
Score = 29.5 bits (63), Expect = 8.9
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 21 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 140
+P +L ++L C LT + ++L P++ LL C+ +C
Sbjct: 274 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 312
>AK001581-1|BAA91770.1| 1084|Homo sapiens protein ( Homo sapiens
cDNA FLJ10719 fis, clone NT2RP3001109. ).
Length = 1084
Score = 29.5 bits (63), Expect = 8.9
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 21 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 140
+P +L ++L C LT + ++L P++ LL C+ +C
Sbjct: 457 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 495
>AF088442-1|AAD29539.1| 43|Homo sapiens T-cell receptor beta chain
protein.
Length = 43
Score = 29.5 bits (63), Expect = 8.9
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 385 VWSCCQTGVRLRYHLRAGNSRHQAGGPSREVP 480
V+ C Q G R LRA ++ H+A GP + VP
Sbjct: 11 VFLCQQQGKGARAVLRARDTAHRARGPEKRVP 42
>AB058697-1|BAB47423.1| 802|Homo sapiens KIAA1794 protein protein.
Length = 802
Score = 29.5 bits (63), Expect = 8.9
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 21 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 140
+P +L ++L C LT + ++L P++ LL C+ +C
Sbjct: 110 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 148
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,203,491
Number of Sequences: 237096
Number of extensions: 2044494
Number of successful extensions: 5318
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 5088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5317
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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