Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_M07
         (462 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    24   2.3  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      23   5.2  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    22   9.1  

>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -2

Query: 431 NYMTVYMNIYIYMFILMKYVISLIM 357
           +Y+T+ +  Y Y+F +  + I+ I+
Sbjct: 352 SYLTILVQYYCYLFFITNFGINFIL 376


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 23.0 bits (47), Expect = 5.2
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -3

Query: 256 SILWLYNTSGKRKYIYVYNVYITYSNKH 173
           +  W+Y    KRK  Y+ N     +N H
Sbjct: 203 AFFWVYRRREKRKPAYLMNSLYNTTNGH 230


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -1

Query: 255 PFFGYTTPLGSVNTYMCITYILLILISI 172
           PF  YT+   S   Y+C   + ++ + I
Sbjct: 178 PFAPYTSIWSSPTVYICFALVAIMTLGI 205


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 432,687
Number of Sequences: 2352
Number of extensions: 7682
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39969834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)