Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_M04
(421 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal prot... 241 4e-64
L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal prot... 241 4e-64
L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal prot... 241 4e-64
L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal prot... 241 4e-64
AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-P... 241 4e-64
AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-P... 237 6e-63
L02074-3|AAB05984.1| 200|Drosophila melanogaster protein ( Dros... 181 4e-46
L02074-2|AAB05983.1| 200|Drosophila melanogaster protein ( Dros... 181 4e-46
AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p pro... 175 2e-44
AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-P... 175 2e-44
AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-P... 46 2e-05
AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-P... 46 2e-05
BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p pro... 44 8e-05
BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p pro... 44 8e-05
AE014298-854|AAF46133.1| 1399|Drosophila melanogaster CG14446-PA... 30 1.1
AY122101-1|AAM52613.1| 1046|Drosophila melanogaster GH08821p pro... 29 1.9
AE013599-4022|AAX52689.1| 1046|Drosophila melanogaster CG16778-P... 29 1.9
AE013599-4021|AAM68329.1| 1046|Drosophila melanogaster CG16778-P... 29 1.9
AE013599-4020|AAF47317.2| 1046|Drosophila melanogaster CG16778-P... 29 1.9
AE013599-4019|AAG22201.2| 1046|Drosophila melanogaster CG16778-P... 29 1.9
>L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 241 bits (589), Expect = 4e-64
Identities = 107/130 (82%), Positives = 121/130 (93%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 211
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 212 FPMKQGVLTNSRVRLLMXKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIVRKGAQE 391
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGC+VDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 392 IPGLTDGEVP 421
IPGLTD +P
Sbjct: 121 IPGLTDTTIP 130
>L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 241 bits (589), Expect = 4e-64
Identities = 107/130 (82%), Positives = 121/130 (93%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 211
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 212 FPMKQGVLTNSRVRLLMXKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIVRKGAQE 391
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGC+VDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 392 IPGLTDGEVP 421
IPGLTD +P
Sbjct: 121 IPGLTDTTIP 130
>L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 241 bits (589), Expect = 4e-64
Identities = 107/130 (82%), Positives = 121/130 (93%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 211
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 212 FPMKQGVLTNSRVRLLMXKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIVRKGAQE 391
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGC+VDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 392 IPGLTDGEVP 421
IPGLTD +P
Sbjct: 121 IPGLTDTTIP 130
>L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 241 bits (589), Expect = 4e-64
Identities = 107/130 (82%), Positives = 121/130 (93%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 211
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 212 FPMKQGVLTNSRVRLLMXKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIVRKGAQE 391
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGC+VDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 392 IPGLTDGEVP 421
IPGLTD +P
Sbjct: 121 IPGLTDTTIP 130
>AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-PB,
isoform B protein.
Length = 248
Score = 241 bits (589), Expect = 4e-64
Identities = 107/130 (82%), Positives = 121/130 (93%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 211
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 212 FPMKQGVLTNSRVRLLMXKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIVRKGAQE 391
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGC+VDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 392 IPGLTDGEVP 421
IPGLTD +P
Sbjct: 121 IPGLTDTTIP 130
>AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-PC,
isoform C protein.
Length = 251
Score = 237 bits (579), Expect = 6e-63
Identities = 105/128 (82%), Positives = 119/128 (92%)
Frame = +2
Query: 38 LNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFP 217
LNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQGFP
Sbjct: 6 LNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFP 65
Query: 218 MKQGVLTNSRVRLLMXKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIVRKGAQEIP 397
MKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGC+VDAN+SVLALV+++KG ++IP
Sbjct: 66 MKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIP 125
Query: 398 GLTDGEVP 421
GLTD +P
Sbjct: 126 GLTDTTIP 133
>L02074-3|AAB05984.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 181 bits (440), Expect = 4e-46
Identities = 85/116 (73%), Positives = 99/116 (85%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 211
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 212 FPMKQGVLTNSRVRLLMXKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIVRK 379
FPMKQGVLT+ R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 61 FPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKK 115
>L02074-2|AAB05983.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 181 bits (440), Expect = 4e-46
Identities = 85/116 (73%), Positives = 99/116 (85%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 211
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 212 FPMKQGVLTNSRVRLLMXKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIVRK 379
FPMKQGVLT+ R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 61 FPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKK 115
>AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p
protein.
Length = 217
Score = 175 bits (426), Expect = 2e-44
Identities = 77/99 (77%), Positives = 90/99 (90%)
Frame = +2
Query: 125 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMXKGHSCYRPRRDGE 304
MG V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GE
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 305 RKRKSVRGCLVDANLSVLALVIVRKGAQEIPGLTDGEVP 421
RKRKSVRGC+VDAN+SVLALV+++KG ++IPGLTD +P
Sbjct: 61 RKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIP 99
>AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-PA,
isoform A protein.
Length = 217
Score = 175 bits (426), Expect = 2e-44
Identities = 77/99 (77%), Positives = 90/99 (90%)
Frame = +2
Query: 125 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMXKGHSCYRPRRDGE 304
MG V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GE
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 305 RKRKSVRGCLVDANLSVLALVIVRKGAQEIPGLTDGEVP 421
RKRKSVRGC+VDAN+SVLALV+++KG ++IPGLTD +P
Sbjct: 61 RKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIP 99
>AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-PA
protein.
Length = 135
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = +2
Query: 239 NSRVRLLMXKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIVRK 379
N R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 5 NRRLRLLK-KIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKK 50
>AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-PA
protein.
Length = 135
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = +2
Query: 239 NSRVRLLMXKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIVRK 379
N R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 5 NRRLRLLK-KIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKK 50
>BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p
protein.
Length = 149
Score = 44.0 bits (99), Expect = 8e-05
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = +2
Query: 245 RVRLLMXKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIVRK 379
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 21 RLRLLK-KIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKK 64
>BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p
protein.
Length = 147
Score = 44.0 bits (99), Expect = 8e-05
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = +2
Query: 245 RVRLLMXKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIVRK 379
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 19 RLRLLK-KIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKK 62
>AE014298-854|AAF46133.1| 1399|Drosophila melanogaster CG14446-PA
protein.
Length = 1399
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 209 PACRYRRQHGEHNLSIRRLEDLHQLQRPYAFHRRYGACAHPPLQ 78
PA +QH +H L+ R ++ + P HR GA A P+Q
Sbjct: 1035 PASNLNKQHADHYLANERKDNALDYKPPVPPHRNVGARACLPVQ 1078
>AY122101-1|AAM52613.1| 1046|Drosophila melanogaster GH08821p
protein.
Length = 1046
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -2
Query: 339 STRQPRTDLRF-LSPSRRGL*QEWPLXIKRRTRLLVRTPCFIGKPCLSLPPATRRT*P 169
ST+ TD +P ++ L E PL + + +LL +TP P S PP T T P
Sbjct: 15 STKLSMTDFACQAAPVKQPLPLELPLPLSVQLQLLAKTPTSDHAPMHSTPPTTPPTPP 72
>AE013599-4022|AAX52689.1| 1046|Drosophila melanogaster CG16778-PD,
isoform D protein.
Length = 1046
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -2
Query: 339 STRQPRTDLRF-LSPSRRGL*QEWPLXIKRRTRLLVRTPCFIGKPCLSLPPATRRT*P 169
ST+ TD +P ++ L E PL + + +LL +TP P S PP T T P
Sbjct: 15 STKLSMTDFACQAAPVKQPLPLELPLPLSVQLQLLAKTPTSDHAPMHSTPPTTPPTPP 72
>AE013599-4021|AAM68329.1| 1046|Drosophila melanogaster CG16778-PC,
isoform C protein.
Length = 1046
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -2
Query: 339 STRQPRTDLRF-LSPSRRGL*QEWPLXIKRRTRLLVRTPCFIGKPCLSLPPATRRT*P 169
ST+ TD +P ++ L E PL + + +LL +TP P S PP T T P
Sbjct: 15 STKLSMTDFACQAAPVKQPLPLELPLPLSVQLQLLAKTPTSDHAPMHSTPPTTPPTPP 72
>AE013599-4020|AAF47317.2| 1046|Drosophila melanogaster CG16778-PB,
isoform B protein.
Length = 1046
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -2
Query: 339 STRQPRTDLRF-LSPSRRGL*QEWPLXIKRRTRLLVRTPCFIGKPCLSLPPATRRT*P 169
ST+ TD +P ++ L E PL + + +LL +TP P S PP T T P
Sbjct: 15 STKLSMTDFACQAAPVKQPLPLELPLPLSVQLQLLAKTPTSDHAPMHSTPPTTPPTPP 72
>AE013599-4019|AAG22201.2| 1046|Drosophila melanogaster CG16778-PA,
isoform A protein.
Length = 1046
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -2
Query: 339 STRQPRTDLRF-LSPSRRGL*QEWPLXIKRRTRLLVRTPCFIGKPCLSLPPATRRT*P 169
ST+ TD +P ++ L E PL + + +LL +TP P S PP T T P
Sbjct: 15 STKLSMTDFACQAAPVKQPLPLELPLPLSVQLQLLAKTPTSDHAPMHSTPPTTPPTPP 72
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,113,097
Number of Sequences: 53049
Number of extensions: 394744
Number of successful extensions: 850
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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