Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_M03
         (183 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    19   4.1  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               19   5.5  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    18   9.5  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    18   9.5  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    18   9.5  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    18   9.5  

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +3

Query: 75  RTTIHLLQVVDRCLIFF*NNRL 140
           R  +H +  +++ L+F  N+RL
Sbjct: 243 RRLVHAVNEIEKRLLFSHNDRL 264


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -1

Query: 159 CYNNVYLVCCFKKKLN 112
           C N +  + CF K L+
Sbjct: 128 CENGLNFIICFSKLLS 143


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/10 (60%), Positives = 6/10 (60%)
 Frame = +3

Query: 129 NNRLSKHYCN 158
           NN   K YCN
Sbjct: 93  NNNYKKLYCN 102


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/10 (60%), Positives = 6/10 (60%)
 Frame = +3

Query: 129 NNRLSKHYCN 158
           NN   K YCN
Sbjct: 93  NNNYKKLYCN 102


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/10 (60%), Positives = 6/10 (60%)
 Frame = +3

Query: 129 NNRLSKHYCN 158
           NN   K YCN
Sbjct: 93  NNNYKKLYCN 102


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 177 NILKHLCYNNVYLVCCFKKKLN 112
           +IL+    N + L+  FK+K+N
Sbjct: 286 DILEEFERNRLQLLESFKRKVN 307


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,117
Number of Sequences: 438
Number of extensions: 403
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 40
effective length of database: 128,823
effective search space used:  2576460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)