Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_M01
(482 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY149237-1|AAN41263.1| 1860|Homo sapiens collagen XXVII proalpha... 33 0.70
AL445543-1|CAI14772.1| 1860|Homo sapiens collagen type XXVII alp... 33 0.70
AL356796-1|CAI16857.1| 1860|Homo sapiens collagen type XXVII alp... 33 0.70
DQ181796-1|ABA10330.1| 834|Homo sapiens NEDD4L variant protein. 31 2.1
BC032597-1|AAH32597.1| 911|Homo sapiens NEDD4L protein protein. 31 2.1
BC019345-1|AAH19345.1| 855|Homo sapiens Unknown (protein for IM... 31 2.1
BC000621-1|AAH00621.2| 855|Homo sapiens NEDD4L protein protein. 31 2.1
AY312514-1|AAP75706.1| 975|Homo sapiens NEDD4.2 protein. 31 2.1
AY112985-1|AAM76730.1| 947|Homo sapiens ubiquitin ligase NEDD4h... 31 2.1
AY112984-1|AAM76729.1| 967|Homo sapiens ubiquitin ligase NEDD4g... 31 2.1
AY112983-1|AAM76728.1| 854|Homo sapiens ubiquitin ligase NEDD4f... 31 2.1
AF385931-1|AAM46208.1| 854|Homo sapiens ubiquitin ligase NEDD4L... 31 2.1
AF210730-1|AAG43524.1| 854|Homo sapiens NEDD4La protein. 31 2.1
AB071179-1|BAB69424.1| 955|Homo sapiens NEDD4-like ubiquitin li... 31 2.1
AB007899-1|BAA23711.1| 995|Homo sapiens KIAA0439 protein. 31 2.1
M26576-1|AAA53098.1| 1669|Homo sapiens alpha-1 type IV collagen ... 31 2.8
M11315-1|AAA52042.1| 411|Homo sapiens COL4A1 protein. 31 2.8
M10940-1|AAA52006.1| 414|Homo sapiens COL4A1 protein. 31 2.8
BC151220-1|AAI51221.1| 1669|Homo sapiens COL4A1 protein protein. 31 2.8
BC060789-1|AAH60789.1| 742|Homo sapiens collectin sub-family me... 31 2.8
BC047305-1|AAH47305.1| 1075|Homo sapiens COL4A1 protein protein. 31 2.8
AL713657-1|CAD28466.1| 417|Homo sapiens hypothetical protein pr... 31 2.8
AL390755-2|CAM20295.1| 1318|Homo sapiens collagen type IV alpha ... 31 2.8
AL390755-1|CAH74130.1| 1669|Homo sapiens collagen type IV alpha ... 31 2.8
AL161773-2|CAM14222.1| 1318|Homo sapiens collagen type IV alpha ... 31 2.8
AL161773-1|CAH71365.1| 1669|Homo sapiens collagen type IV alpha ... 31 2.8
AB209646-1|BAD92883.1| 847|Homo sapiens COL4A1 protein variant ... 31 2.8
AB052103-1|BAB39148.1| 622|Homo sapiens scavenger receptor with... 31 2.8
AB038518-1|BAB39147.1| 742|Homo sapiens scavenger receptor with... 31 2.8
AB034251-1|BAD83592.1| 742|Homo sapiens nurse cell scavenger re... 31 2.8
AB005145-1|BAB72147.1| 742|Homo sapiens collectin placenta 1 pr... 31 2.8
U43408-1|AAC50427.1| 666|Homo sapiens tyrosine kinase protein. 30 3.7
BC035782-1|AAH35782.1| 661|Homo sapiens TNK1 protein protein. 30 3.7
AK091779-1|BAC03745.1| 204|Homo sapiens protein ( Homo sapiens ... 30 3.7
AF097738-1|AAC99412.1| 661|Homo sapiens non-receptor tyosine ki... 30 3.7
EF560718-1|ABQ59028.1| 1205|Homo sapiens APAF1 protein protein. 29 6.5
BC150255-1|AAI50256.1| 1237|Homo sapiens apoptotic peptidase act... 29 6.5
BC065819-1|AAH65819.1| 516|Homo sapiens CTNNA3 protein protein. 29 6.5
BC030646-1|AAH30646.1| 376|Homo sapiens CTNNA3 protein protein. 29 6.5
BC022004-1|AAH22004.1| 376|Homo sapiens CTNNA3 protein protein. 29 6.5
AY198183-1|AAO43101.1| 124|Homo sapiens alpha-T-catenin isoform... 29 6.5
AL731549-1|CAH70164.1| 895|Homo sapiens catenin (cadherin-assoc... 29 6.5
AL731538-1|CAH73988.1| 895|Homo sapiens catenin (cadherin-assoc... 29 6.5
AL607023-1|CAI16316.1| 895|Homo sapiens catenin (cadherin-assoc... 29 6.5
AL607022-2|CAI13390.1| 895|Homo sapiens catenin (cadherin-assoc... 29 6.5
AL607022-1|CAI13388.1| 193|Homo sapiens catenin (cadherin-assoc... 29 6.5
AL442645-6|CAM17596.1| 1704|Homo sapiens transient receptor pote... 29 6.5
AL442645-5|CAM17595.1| 1322|Homo sapiens transient receptor pote... 29 6.5
AL358786-6|CAM15782.1| 1704|Homo sapiens transient receptor pote... 29 6.5
AL358786-5|CAM15781.1| 1322|Homo sapiens transient receptor pote... 29 6.5
AL356318-12|CAM13169.1| 1704|Homo sapiens transient receptor pot... 29 6.5
AL356318-11|CAM13168.1| 1322|Homo sapiens transient receptor pot... 29 6.5
AL161913-2|CAM22746.1| 1704|Homo sapiens transient receptor pote... 29 6.5
AL161913-1|CAM22745.1| 1322|Homo sapiens transient receptor pote... 29 6.5
AL159990-10|CAM13096.1| 1704|Homo sapiens transient receptor pot... 29 6.5
AL159990-9|CAM13095.1| 1322|Homo sapiens transient receptor pote... 29 6.5
AJ505026-1|CAD43605.1| 1325|Homo sapiens long transient receptor... 29 6.5
AJ505025-1|CAD43604.1| 1707|Homo sapiens long transient receptor... 29 6.5
AJ243048-1|CAB55588.1| 1248|Homo sapiens apoptotic protease acti... 29 6.5
AJ243011-1|CAB55587.1| 1205|Homo sapiens protease activating fac... 29 6.5
AJ243010-1|CAB55586.1| 1205|Homo sapiens apoptotic protease acti... 29 6.5
AJ243009-1|CAB55585.1| 1248|Homo sapiens apoptotic protease acti... 29 6.5
AJ243008-1|CAB55584.1| 1205|Homo sapiens apoptotic protease acti... 29 6.5
AJ243007-1|CAB55583.1| 1205|Homo sapiens apoptotic protease acti... 29 6.5
AJ243006-1|CAB55582.1| 1205|Homo sapiens apoptotic protease acti... 29 6.5
AJ243005-1|CAB55581.1| 1205|Homo sapiens apoptotic protease acti... 29 6.5
AJ243004-1|CAB55580.1| 1205|Homo sapiens apoptotic protease acti... 29 6.5
AJ243003-1|CAB55579.1| 1205|Homo sapiens apoptotic protease acti... 29 6.5
AF282692-1|AAQ14328.1| 895|Homo sapiens alphaT-catenin protein. 29 6.5
AF149794-1|AAD34016.1| 1248|Homo sapiens apoptotic protease acti... 29 6.5
AF134397-1|AAD38344.1| 1237|Homo sapiens apoptotic protease acti... 29 6.5
AF091606-1|AAF21801.1| 895|Homo sapiens alphaT-catenin protein. 29 6.5
AF013263-1|AAC51678.1| 1194|Homo sapiens apoptotic protease acti... 29 6.5
AB007873-1|BAA24843.2| 1237|Homo sapiens KIAA0413 protein. 29 6.5
>AY149237-1|AAN41263.1| 1860|Homo sapiens collagen XXVII proalpha 1
chain precursor protein.
Length = 1860
Score = 32.7 bits (71), Expect = 0.70
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -3
Query: 297 YPSPPGGEGLPGQIRPPPHN 238
+P PPG EG PG I PP N
Sbjct: 902 FPGPPGPEGFPGDIGPPGDN 921
>AL445543-1|CAI14772.1| 1860|Homo sapiens collagen type XXVII alpha
1 protein.
Length = 1860
Score = 32.7 bits (71), Expect = 0.70
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -3
Query: 297 YPSPPGGEGLPGQIRPPPHN 238
+P PPG EG PG I PP N
Sbjct: 902 FPGPPGPEGFPGDIGPPGDN 921
>AL356796-1|CAI16857.1| 1860|Homo sapiens collagen type XXVII alpha
1 protein.
Length = 1860
Score = 32.7 bits (71), Expect = 0.70
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -3
Query: 297 YPSPPGGEGLPGQIRPPPHN 238
+P PPG EG PG I PP N
Sbjct: 902 FPGPPGPEGFPGDIGPPGDN 921
>DQ181796-1|ABA10330.1| 834|Homo sapiens NEDD4L variant protein.
Length = 834
Score = 31.1 bits (67), Expect = 2.1
Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Frame = -1
Query: 290 PLQAEKVSPARSGHLHTTITLGNGRS-MPPPLHPLVCQYGKVQS-CPTRPELR--PAGRA 123
PL+ K SP R TL N +S P P + Q+ QS P E+R P GR
Sbjct: 316 PLEGAKDSPVRRA---VKDTLSNPQSPQPSPYNSPKPQHKVTQSFLPPGWEMRIAPNGRP 372
Query: 122 ---QHTTIVVTWVSDRGDYPEHPNSQT 51
H T TW R +P H S+T
Sbjct: 373 FFIDHNTKTTTWEDPRLKFPVHMRSKT 399
>BC032597-1|AAH32597.1| 911|Homo sapiens NEDD4L protein protein.
Length = 911
Score = 31.1 bits (67), Expect = 2.1
Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Frame = -1
Query: 290 PLQAEKVSPARSGHLHTTITLGNGRS-MPPPLHPLVCQYGKVQS-CPTRPELR--PAGRA 123
PL+ K SP R TL N +S P P + Q+ QS P E+R P GR
Sbjct: 393 PLEGAKDSPVRRA---VKDTLSNPQSPQPSPYNSPKPQHKVTQSFLPPGWEMRIAPNGRP 449
Query: 122 ---QHTTIVVTWVSDRGDYPEHPNSQT 51
H T TW R +P H S+T
Sbjct: 450 FFIDHNTKTTTWEDPRLKFPVHMRSKT 476
>BC019345-1|AAH19345.1| 855|Homo sapiens Unknown (protein for
IMAGE:3604024) protein.
Length = 855
Score = 31.1 bits (67), Expect = 2.1
Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Frame = -1
Query: 290 PLQAEKVSPARSGHLHTTITLGNGRS-MPPPLHPLVCQYGKVQS-CPTRPELR--PAGRA 123
PL+ K SP R TL N +S P P + Q+ QS P E+R P GR
Sbjct: 337 PLEGAKDSPVRRA---VKDTLSNPQSPQPSPYNSPKPQHKVTQSFLPPGWEMRIAPNGRP 393
Query: 122 ---QHTTIVVTWVSDRGDYPEHPNSQT 51
H T TW R +P H S+T
Sbjct: 394 FFIDHNTKTTTWEDPRLKFPVHMRSKT 420
>BC000621-1|AAH00621.2| 855|Homo sapiens NEDD4L protein protein.
Length = 855
Score = 31.1 bits (67), Expect = 2.1
Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Frame = -1
Query: 290 PLQAEKVSPARSGHLHTTITLGNGRS-MPPPLHPLVCQYGKVQS-CPTRPELR--PAGRA 123
PL+ K SP R TL N +S P P + Q+ QS P E+R P GR
Sbjct: 337 PLEGAKDSPVRRA---VKDTLSNPQSPQPSPYNSPKPQHKVTQSFLPPGWEMRIAPNGRP 393
Query: 122 ---QHTTIVVTWVSDRGDYPEHPNSQT 51
H T TW R +P H S+T
Sbjct: 394 FFIDHNTKTTTWEDPRLKFPVHMRSKT 420
>AY312514-1|AAP75706.1| 975|Homo sapiens NEDD4.2 protein.
Length = 975
Score = 31.1 bits (67), Expect = 2.1
Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Frame = -1
Query: 290 PLQAEKVSPARSGHLHTTITLGNGRS-MPPPLHPLVCQYGKVQS-CPTRPELR--PAGRA 123
PL+ K SP R TL N +S P P + Q+ QS P E+R P GR
Sbjct: 457 PLEGAKDSPVRRA---VKDTLSNPQSPQPSPYNSPKPQHKVTQSFLPPGWEMRIAPNGRP 513
Query: 122 ---QHTTIVVTWVSDRGDYPEHPNSQT 51
H T TW R +P H S+T
Sbjct: 514 FFIDHNTKTTTWEDPRLKFPVHMRSKT 540
>AY112985-1|AAM76730.1| 947|Homo sapiens ubiquitin ligase NEDD4h
protein.
Length = 947
Score = 31.1 bits (67), Expect = 2.1
Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Frame = -1
Query: 290 PLQAEKVSPARSGHLHTTITLGNGRS-MPPPLHPLVCQYGKVQS-CPTRPELR--PAGRA 123
PL+ K SP R TL N +S P P + Q+ QS P E+R P GR
Sbjct: 429 PLEGAKDSPVRRA---VKDTLSNPQSPQPSPYNSPKPQHKVTQSFLPPGWEMRIAPNGRP 485
Query: 122 ---QHTTIVVTWVSDRGDYPEHPNSQT 51
H T TW R +P H S+T
Sbjct: 486 FFIDHNTKTTTWEDPRLKFPVHMRSKT 512
>AY112984-1|AAM76729.1| 967|Homo sapiens ubiquitin ligase NEDD4g
protein.
Length = 967
Score = 31.1 bits (67), Expect = 2.1
Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Frame = -1
Query: 290 PLQAEKVSPARSGHLHTTITLGNGRS-MPPPLHPLVCQYGKVQS-CPTRPELR--PAGRA 123
PL+ K SP R TL N +S P P + Q+ QS P E+R P GR
Sbjct: 449 PLEGAKDSPVRRA---VKDTLSNPQSPQPSPYNSPKPQHKVTQSFLPPGWEMRIAPNGRP 505
Query: 122 ---QHTTIVVTWVSDRGDYPEHPNSQT 51
H T TW R +P H S+T
Sbjct: 506 FFIDHNTKTTTWEDPRLKFPVHMRSKT 532
>AY112983-1|AAM76728.1| 854|Homo sapiens ubiquitin ligase NEDD4f
protein.
Length = 854
Score = 31.1 bits (67), Expect = 2.1
Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Frame = -1
Query: 290 PLQAEKVSPARSGHLHTTITLGNGRS-MPPPLHPLVCQYGKVQS-CPTRPELR--PAGRA 123
PL+ K SP R TL N +S P P + Q+ QS P E+R P GR
Sbjct: 336 PLEGAKDSPVRRA---VKDTLSNPQSPQPSPYNSPKPQHKVTQSFLPPGWEMRIAPNGRP 392
Query: 122 ---QHTTIVVTWVSDRGDYPEHPNSQT 51
H T TW R +P H S+T
Sbjct: 393 FFIDHNTKTTTWEDPRLKFPVHMRSKT 419
>AF385931-1|AAM46208.1| 854|Homo sapiens ubiquitin ligase NEDD4Lb
protein.
Length = 854
Score = 31.1 bits (67), Expect = 2.1
Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Frame = -1
Query: 290 PLQAEKVSPARSGHLHTTITLGNGRS-MPPPLHPLVCQYGKVQS-CPTRPELR--PAGRA 123
PL+ K SP R TL N +S P P + Q+ QS P E+R P GR
Sbjct: 336 PLEGAKDSPVRRA---VKDTLSNPQSPQPSPYNSPKPQHKVTQSFLPPGWEMRIAPNGRP 392
Query: 122 ---QHTTIVVTWVSDRGDYPEHPNSQT 51
H T TW R +P H S+T
Sbjct: 393 FFIDHNTKTTTWEDPRLKFPVHMRSKT 419
>AF210730-1|AAG43524.1| 854|Homo sapiens NEDD4La protein.
Length = 854
Score = 31.1 bits (67), Expect = 2.1
Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Frame = -1
Query: 290 PLQAEKVSPARSGHLHTTITLGNGRS-MPPPLHPLVCQYGKVQS-CPTRPELR--PAGRA 123
PL+ K SP R TL N +S P P + Q+ QS P E+R P GR
Sbjct: 336 PLEGAKDSPVRRA---VKDTLSNPQSPQPSPYNSPKPQHKVTQSFLPPGWEMRIAPNGRP 392
Query: 122 ---QHTTIVVTWVSDRGDYPEHPNSQT 51
H T TW R +P H S+T
Sbjct: 393 FFIDHNTKTTTWEDPRLKFPVHMRSKT 419
>AB071179-1|BAB69424.1| 955|Homo sapiens NEDD4-like ubiquitin
ligase 3 protein.
Length = 955
Score = 31.1 bits (67), Expect = 2.1
Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Frame = -1
Query: 290 PLQAEKVSPARSGHLHTTITLGNGRS-MPPPLHPLVCQYGKVQS-CPTRPELR--PAGRA 123
PL+ K SP R TL N +S P P + Q+ QS P E+R P GR
Sbjct: 437 PLEGAKDSPVRRA---VKDTLSNPQSPQPSPYNSPKPQHKVTQSFLPPGWEMRIAPNGRP 493
Query: 122 ---QHTTIVVTWVSDRGDYPEHPNSQT 51
H T TW R +P H S+T
Sbjct: 494 FFIDHNTKTTTWEDPRLKFPVHMRSKT 520
>AB007899-1|BAA23711.1| 995|Homo sapiens KIAA0439 protein.
Length = 995
Score = 31.1 bits (67), Expect = 2.1
Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Frame = -1
Query: 290 PLQAEKVSPARSGHLHTTITLGNGRS-MPPPLHPLVCQYGKVQS-CPTRPELR--PAGRA 123
PL+ K SP R TL N +S P P + Q+ QS P E+R P GR
Sbjct: 477 PLEGAKDSPVRRA---VKDTLSNPQSPQPSPYNSPKPQHKVTQSFLPPGWEMRIAPNGRP 533
Query: 122 ---QHTTIVVTWVSDRGDYPEHPNSQT 51
H T TW R +P H S+T
Sbjct: 534 FFIDHNTKTTTWEDPRLKFPVHMRSKT 560
>M26576-1|AAA53098.1| 1669|Homo sapiens alpha-1 type IV collagen
protein.
Length = 1669
Score = 30.7 bits (66), Expect = 2.8
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 297 YPSPPGGEGLPGQIRPP 247
+P PPG +GLPG + PP
Sbjct: 1421 FPGPPGPDGLPGSMGPP 1437
>M11315-1|AAA52042.1| 411|Homo sapiens COL4A1 protein.
Length = 411
Score = 30.7 bits (66), Expect = 2.8
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 297 YPSPPGGEGLPGQIRPP 247
+P PPG +GLPG + PP
Sbjct: 163 FPGPPGPDGLPGSMGPP 179
>M10940-1|AAA52006.1| 414|Homo sapiens COL4A1 protein.
Length = 414
Score = 30.7 bits (66), Expect = 2.8
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 297 YPSPPGGEGLPGQIRPP 247
+P PPG +GLPG + PP
Sbjct: 166 FPGPPGPDGLPGSMGPP 182
>BC151220-1|AAI51221.1| 1669|Homo sapiens COL4A1 protein protein.
Length = 1669
Score = 30.7 bits (66), Expect = 2.8
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 297 YPSPPGGEGLPGQIRPP 247
+P PPG +GLPG + PP
Sbjct: 1421 FPGPPGPDGLPGSMGPP 1437
>BC060789-1|AAH60789.1| 742|Homo sapiens collectin sub-family
member 12 protein.
Length = 742
Score = 30.7 bits (66), Expect = 2.8
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -3
Query: 294 PSPPGGEGLPGQIRPPPHNHYTG*WKVYATAPSPLGLP 181
P PPG EGLPG PP G P P GLP
Sbjct: 529 PGPPGKEGLPGPQGPPGFQGLQG-TVGEPGVPGPRGLP 565
>BC047305-1|AAH47305.1| 1075|Homo sapiens COL4A1 protein protein.
Length = 1075
Score = 30.7 bits (66), Expect = 2.8
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 297 YPSPPGGEGLPGQIRPP 247
+P PPG +GLPG + PP
Sbjct: 827 FPGPPGPDGLPGSMGPP 843
>AL713657-1|CAD28466.1| 417|Homo sapiens hypothetical protein
protein.
Length = 417
Score = 30.7 bits (66), Expect = 2.8
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -3
Query: 294 PSPPGGEGLPGQIRPPPHNHYTG*WKVYATAPSPLGLP 181
P PPG EGLPG PP G P P GLP
Sbjct: 204 PGPPGKEGLPGPQGPPGFQGLQG-TVGEPGVPGPRGLP 240
>AL390755-2|CAM20295.1| 1318|Homo sapiens collagen type IV alpha 1
protein.
Length = 1318
Score = 30.7 bits (66), Expect = 2.8
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 297 YPSPPGGEGLPGQIRPP 247
+P PPG +GLPG + PP
Sbjct: 1070 FPGPPGPDGLPGSMGPP 1086
>AL390755-1|CAH74130.1| 1669|Homo sapiens collagen type IV alpha 1
protein.
Length = 1669
Score = 30.7 bits (66), Expect = 2.8
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 297 YPSPPGGEGLPGQIRPP 247
+P PPG +GLPG + PP
Sbjct: 1421 FPGPPGPDGLPGSMGPP 1437
>AL161773-2|CAM14222.1| 1318|Homo sapiens collagen type IV alpha 1
protein.
Length = 1318
Score = 30.7 bits (66), Expect = 2.8
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 297 YPSPPGGEGLPGQIRPP 247
+P PPG +GLPG + PP
Sbjct: 1070 FPGPPGPDGLPGSMGPP 1086
>AL161773-1|CAH71365.1| 1669|Homo sapiens collagen type IV alpha 1
protein.
Length = 1669
Score = 30.7 bits (66), Expect = 2.8
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 297 YPSPPGGEGLPGQIRPP 247
+P PPG +GLPG + PP
Sbjct: 1421 FPGPPGPDGLPGSMGPP 1437
>AB209646-1|BAD92883.1| 847|Homo sapiens COL4A1 protein variant
protein.
Length = 847
Score = 30.7 bits (66), Expect = 2.8
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 297 YPSPPGGEGLPGQIRPP 247
+P PPG +GLPG + PP
Sbjct: 599 FPGPPGPDGLPGSMGPP 615
>AB052103-1|BAB39148.1| 622|Homo sapiens scavenger receptor with
C-type lectin type II protein.
Length = 622
Score = 30.7 bits (66), Expect = 2.8
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -3
Query: 294 PSPPGGEGLPGQIRPPPHNHYTG*WKVYATAPSPLGLP 181
P PPG EGLPG PP G P P GLP
Sbjct: 529 PGPPGKEGLPGPQGPPGFQGLQG-TVGEPGVPGPRGLP 565
>AB038518-1|BAB39147.1| 742|Homo sapiens scavenger receptor with
C-type lectin type I protein.
Length = 742
Score = 30.7 bits (66), Expect = 2.8
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -3
Query: 294 PSPPGGEGLPGQIRPPPHNHYTG*WKVYATAPSPLGLP 181
P PPG EGLPG PP G P P GLP
Sbjct: 529 PGPPGKEGLPGPQGPPGFQGLQG-TVGEPGVPGPRGLP 565
>AB034251-1|BAD83592.1| 742|Homo sapiens nurse cell scavenger
receptor 2 protein.
Length = 742
Score = 30.7 bits (66), Expect = 2.8
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -3
Query: 294 PSPPGGEGLPGQIRPPPHNHYTG*WKVYATAPSPLGLP 181
P PPG EGLPG PP G P P GLP
Sbjct: 529 PGPPGKEGLPGPQGPPGFQGLQG-TVGEPGVPGPRGLP 565
>AB005145-1|BAB72147.1| 742|Homo sapiens collectin placenta 1
protein.
Length = 742
Score = 30.7 bits (66), Expect = 2.8
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -3
Query: 294 PSPPGGEGLPGQIRPPPHNHYTG*WKVYATAPSPLGLP 181
P PPG EGLPG PP G P P GLP
Sbjct: 529 PGPPGKEGLPGPQGPPGFQGLQG-TVGEPGVPGPRGLP 565
>U43408-1|AAC50427.1| 666|Homo sapiens tyrosine kinase protein.
Length = 666
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3
Query: 294 PSPPGGEGLPGQIRPPPHNHYTG 226
PS P E LP R PPHNH G
Sbjct: 549 PSQPSRERLPWPERKPPHNHPMG 571
>BC035782-1|AAH35782.1| 661|Homo sapiens TNK1 protein protein.
Length = 661
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3
Query: 294 PSPPGGEGLPGQIRPPPHNHYTG 226
PS P E LP R PPHNH G
Sbjct: 544 PSQPSRERLPWPKRKPPHNHPMG 566
>AK091779-1|BAC03745.1| 204|Homo sapiens protein ( Homo sapiens
cDNA FLJ34460 fis, clone HLUNG2002942. ).
Length = 204
Score = 30.3 bits (65), Expect = 3.7
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = -1
Query: 296 IRPLQAEKVSPARSGHLHTTITLGNGRSMPPPLHPLVCQYGKVQSCPTRPELRPAG 129
+ PL K R G LH + R PPP HP+ + +SC RP L +G
Sbjct: 148 LSPLAHSKGRDQRGGGLHPP----SPRCSPPPYHPVQRCPRRWESCEGRPHLACSG 199
>AF097738-1|AAC99412.1| 661|Homo sapiens non-receptor tyosine
kinase protein.
Length = 661
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3
Query: 294 PSPPGGEGLPGQIRPPPHNHYTG 226
PS P E LP R PPHNH G
Sbjct: 544 PSQPSRERLPWPKRKPPHNHPMG 566
>EF560718-1|ABQ59028.1| 1205|Homo sapiens APAF1 protein protein.
Length = 1205
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 60 VWMFGVISPITDPRHHNGSVLCTA 131
+W F ++ P+ + R HNG V C+A
Sbjct: 1068 IWSFDLLLPLHELRGHNGCVRCSA 1091
>BC150255-1|AAI50256.1| 1237|Homo sapiens apoptotic peptidase
activating factor 1 protein.
Length = 1237
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 60 VWMFGVISPITDPRHHNGSVLCTA 131
+W F ++ P+ + R HNG V C+A
Sbjct: 1100 IWSFDLLLPLHELRGHNGCVRCSA 1123
>BC065819-1|AAH65819.1| 516|Homo sapiens CTNNA3 protein protein.
Length = 516
Score = 29.5 bits (63), Expect = 6.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -1
Query: 200 LHPLVCQYGKVQSCPTRPELRPAGRAQHTTIVVTWVSD 87
L PL+ Q + +CP P R GR++ ++++ V +
Sbjct: 27 LEPLIIQVTTLVNCPQNPSSRKKGRSKRASVLLASVEE 64
>BC030646-1|AAH30646.1| 376|Homo sapiens CTNNA3 protein protein.
Length = 376
Score = 29.5 bits (63), Expect = 6.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -1
Query: 200 LHPLVCQYGKVQSCPTRPELRPAGRAQHTTIVVTWVSD 87
L PL+ Q + +CP P R GR++ ++++ V +
Sbjct: 27 LEPLIIQVTTLVNCPQNPSSRKKGRSKRASVLLASVEE 64
>BC022004-1|AAH22004.1| 376|Homo sapiens CTNNA3 protein protein.
Length = 376
Score = 29.5 bits (63), Expect = 6.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -1
Query: 200 LHPLVCQYGKVQSCPTRPELRPAGRAQHTTIVVTWVSD 87
L PL+ Q + +CP P R GR++ ++++ V +
Sbjct: 27 LEPLIIQVTTLVNCPQNPSSRKKGRSKRASVLLASVEE 64
>AY198183-1|AAO43101.1| 124|Homo sapiens alpha-T-catenin isoform 2
protein.
Length = 124
Score = 29.5 bits (63), Expect = 6.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -1
Query: 200 LHPLVCQYGKVQSCPTRPELRPAGRAQHTTIVVTWVSD 87
L PL+ Q + +CP P R GR++ ++++ V +
Sbjct: 39 LEPLIIQVTTLVNCPQNPSSRKKGRSKRASVLLASVEE 76
>AL731549-1|CAH70164.1| 895|Homo sapiens catenin
(cadherin-associated protein), alpha 3 protein.
Length = 895
Score = 29.5 bits (63), Expect = 6.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -1
Query: 200 LHPLVCQYGKVQSCPTRPELRPAGRAQHTTIVVTWVSD 87
L PL+ Q + +CP P R GR++ ++++ V +
Sbjct: 27 LEPLIIQVTTLVNCPQNPSSRKKGRSKRASVLLASVEE 64
>AL731538-1|CAH73988.1| 895|Homo sapiens catenin
(cadherin-associated protein), alpha 3 protein.
Length = 895
Score = 29.5 bits (63), Expect = 6.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -1
Query: 200 LHPLVCQYGKVQSCPTRPELRPAGRAQHTTIVVTWVSD 87
L PL+ Q + +CP P R GR++ ++++ V +
Sbjct: 27 LEPLIIQVTTLVNCPQNPSSRKKGRSKRASVLLASVEE 64
>AL607023-1|CAI16316.1| 895|Homo sapiens catenin
(cadherin-associated protein), alpha 3 protein.
Length = 895
Score = 29.5 bits (63), Expect = 6.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -1
Query: 200 LHPLVCQYGKVQSCPTRPELRPAGRAQHTTIVVTWVSD 87
L PL+ Q + +CP P R GR++ ++++ V +
Sbjct: 27 LEPLIIQVTTLVNCPQNPSSRKKGRSKRASVLLASVEE 64
>AL607022-2|CAI13390.1| 895|Homo sapiens catenin
(cadherin-associated protein), alpha 3 protein.
Length = 895
Score = 29.5 bits (63), Expect = 6.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -1
Query: 200 LHPLVCQYGKVQSCPTRPELRPAGRAQHTTIVVTWVSD 87
L PL+ Q + +CP P R GR++ ++++ V +
Sbjct: 27 LEPLIIQVTTLVNCPQNPSSRKKGRSKRASVLLASVEE 64
>AL607022-1|CAI13388.1| 193|Homo sapiens catenin
(cadherin-associated protein), alpha 3 protein.
Length = 193
Score = 29.5 bits (63), Expect = 6.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -1
Query: 200 LHPLVCQYGKVQSCPTRPELRPAGRAQHTTIVVTWVSD 87
L PL+ Q + +CP P R GR++ ++++ V +
Sbjct: 27 LEPLIIQVTTLVNCPQNPSSRKKGRSKRASVLLASVEE 64
>AL442645-6|CAM17596.1| 1704|Homo sapiens transient receptor
potential cation channel, subfamily M, member 3 protein.
Length = 1704
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 259 DQATSTQPLHWVMEGLCHRPFTP 191
+QA + +PL+W + LCH F P
Sbjct: 31 NQADAPRPLNWTIRKLCHAAFLP 53
>AL442645-5|CAM17595.1| 1322|Homo sapiens transient receptor
potential cation channel, subfamily M, member 3 protein.
Length = 1322
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 259 DQATSTQPLHWVMEGLCHRPFTP 191
+QA + +PL+W + LCH F P
Sbjct: 31 NQADAPRPLNWTIRKLCHAAFLP 53
>AL358786-6|CAM15782.1| 1704|Homo sapiens transient receptor
potential cation channel, subfamily M, member 3 protein.
Length = 1704
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 259 DQATSTQPLHWVMEGLCHRPFTP 191
+QA + +PL+W + LCH F P
Sbjct: 31 NQADAPRPLNWTIRKLCHAAFLP 53
>AL358786-5|CAM15781.1| 1322|Homo sapiens transient receptor
potential cation channel, subfamily M, member 3 protein.
Length = 1322
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 259 DQATSTQPLHWVMEGLCHRPFTP 191
+QA + +PL+W + LCH F P
Sbjct: 31 NQADAPRPLNWTIRKLCHAAFLP 53
>AL356318-12|CAM13169.1| 1704|Homo sapiens transient receptor
potential cation channel, subfamily M, member 3 protein.
Length = 1704
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 259 DQATSTQPLHWVMEGLCHRPFTP 191
+QA + +PL+W + LCH F P
Sbjct: 31 NQADAPRPLNWTIRKLCHAAFLP 53
>AL356318-11|CAM13168.1| 1322|Homo sapiens transient receptor
potential cation channel, subfamily M, member 3 protein.
Length = 1322
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 259 DQATSTQPLHWVMEGLCHRPFTP 191
+QA + +PL+W + LCH F P
Sbjct: 31 NQADAPRPLNWTIRKLCHAAFLP 53
>AL161913-2|CAM22746.1| 1704|Homo sapiens transient receptor
potential cation channel, subfamily M, member 3 protein.
Length = 1704
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 259 DQATSTQPLHWVMEGLCHRPFTP 191
+QA + +PL+W + LCH F P
Sbjct: 31 NQADAPRPLNWTIRKLCHAAFLP 53
>AL161913-1|CAM22745.1| 1322|Homo sapiens transient receptor
potential cation channel, subfamily M, member 3 protein.
Length = 1322
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 259 DQATSTQPLHWVMEGLCHRPFTP 191
+QA + +PL+W + LCH F P
Sbjct: 31 NQADAPRPLNWTIRKLCHAAFLP 53
>AL159990-10|CAM13096.1| 1704|Homo sapiens transient receptor
potential cation channel, subfamily M, member 3 protein.
Length = 1704
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 259 DQATSTQPLHWVMEGLCHRPFTP 191
+QA + +PL+W + LCH F P
Sbjct: 31 NQADAPRPLNWTIRKLCHAAFLP 53
>AL159990-9|CAM13095.1| 1322|Homo sapiens transient receptor
potential cation channel, subfamily M, member 3 protein.
Length = 1322
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 259 DQATSTQPLHWVMEGLCHRPFTP 191
+QA + +PL+W + LCH F P
Sbjct: 31 NQADAPRPLNWTIRKLCHAAFLP 53
>AJ505026-1|CAD43605.1| 1325|Homo sapiens long transient receptor
potential channel 3 protein.
Length = 1325
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 259 DQATSTQPLHWVMEGLCHRPFTP 191
+QA + +PL+W + LCH F P
Sbjct: 31 NQADAPRPLNWTIRKLCHAAFLP 53
>AJ505025-1|CAD43604.1| 1707|Homo sapiens long transient receptor
potential channel 3 protein.
Length = 1707
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 259 DQATSTQPLHWVMEGLCHRPFTP 191
+QA + +PL+W + LCH F P
Sbjct: 31 NQADAPRPLNWTIRKLCHAAFLP 53
>AJ243048-1|CAB55588.1| 1248|Homo sapiens apoptotic protease
activating factor 1 protein.
Length = 1248
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 60 VWMFGVISPITDPRHHNGSVLCTA 131
+W F ++ P+ + R HNG V C+A
Sbjct: 1111 IWSFDLLLPLHELRGHNGCVRCSA 1134
>AJ243011-1|CAB55587.1| 1205|Homo sapiens protease activating factor-1
protein.
Length = 1205
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 60 VWMFGVISPITDPRHHNGSVLCTA 131
+W F ++ P+ + R HNG V C+A
Sbjct: 1068 IWSFDLLLPLHELRGHNGCVRCSA 1091
>AJ243010-1|CAB55586.1| 1205|Homo sapiens apoptotic protease
activating factor 1 protein.
Length = 1205
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 60 VWMFGVISPITDPRHHNGSVLCTA 131
+W F ++ P+ + R HNG V C+A
Sbjct: 1068 IWSFDLLLPLHELRGHNGCVRCSA 1091
>AJ243009-1|CAB55585.1| 1248|Homo sapiens apoptotic protease
activating factor 1 protein.
Length = 1248
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 60 VWMFGVISPITDPRHHNGSVLCTA 131
+W F ++ P+ + R HNG V C+A
Sbjct: 1111 IWSFDLLLPLHELRGHNGCVRCSA 1134
>AJ243008-1|CAB55584.1| 1205|Homo sapiens apoptotic protease
activating factor 1 protein.
Length = 1205
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 60 VWMFGVISPITDPRHHNGSVLCTA 131
+W F ++ P+ + R HNG V C+A
Sbjct: 1068 IWSFDLLLPLHELRGHNGCVRCSA 1091
>AJ243007-1|CAB55583.1| 1205|Homo sapiens apoptotic protease
activating factor 1 protein.
Length = 1205
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 60 VWMFGVISPITDPRHHNGSVLCTA 131
+W F ++ P+ + R HNG V C+A
Sbjct: 1068 IWSFDLLLPLHELRGHNGCVRCSA 1091
>AJ243006-1|CAB55582.1| 1205|Homo sapiens apoptotic protease
activating factor 1 protein.
Length = 1205
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 60 VWMFGVISPITDPRHHNGSVLCTA 131
+W F ++ P+ + R HNG V C+A
Sbjct: 1068 IWSFDLLLPLHELRGHNGCVRCSA 1091
>AJ243005-1|CAB55581.1| 1205|Homo sapiens apoptotic protease
activating factor 1 protein.
Length = 1205
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 60 VWMFGVISPITDPRHHNGSVLCTA 131
+W F ++ P+ + R HNG V C+A
Sbjct: 1068 IWSFDLLLPLHELRGHNGCVRCSA 1091
>AJ243004-1|CAB55580.1| 1205|Homo sapiens apoptotic protease
activating factor 1 protein.
Length = 1205
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 60 VWMFGVISPITDPRHHNGSVLCTA 131
+W F ++ P+ + R HNG V C+A
Sbjct: 1068 IWSFDLLLPLHELRGHNGCVRCSA 1091
>AJ243003-1|CAB55579.1| 1205|Homo sapiens apoptotic protease
activating factor 1 protein.
Length = 1205
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 60 VWMFGVISPITDPRHHNGSVLCTA 131
+W F ++ P+ + R HNG V C+A
Sbjct: 1068 IWSFDLLLPLHELRGHNGCVRCSA 1091
>AF282692-1|AAQ14328.1| 895|Homo sapiens alphaT-catenin protein.
Length = 895
Score = 29.5 bits (63), Expect = 6.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -1
Query: 200 LHPLVCQYGKVQSCPTRPELRPAGRAQHTTIVVTWVSD 87
L PL+ Q + +CP P R GR++ ++++ V +
Sbjct: 27 LEPLIIQVTTLVNCPQNPSSRKKGRSKRASVLLASVEE 64
>AF149794-1|AAD34016.1| 1248|Homo sapiens apoptotic protease
activating factor 1 protein.
Length = 1248
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 60 VWMFGVISPITDPRHHNGSVLCTA 131
+W F ++ P+ + R HNG V C+A
Sbjct: 1111 IWSFDLLLPLHELRGHNGCVRCSA 1134
>AF134397-1|AAD38344.1| 1237|Homo sapiens apoptotic protease
activating factor-1 long isoform APAF-1L protein.
Length = 1237
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 60 VWMFGVISPITDPRHHNGSVLCTA 131
+W F ++ P+ + R HNG V C+A
Sbjct: 1100 IWSFDLLLPLHELRGHNGCVRCSA 1123
>AF091606-1|AAF21801.1| 895|Homo sapiens alphaT-catenin protein.
Length = 895
Score = 29.5 bits (63), Expect = 6.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -1
Query: 200 LHPLVCQYGKVQSCPTRPELRPAGRAQHTTIVVTWVSD 87
L PL+ Q + +CP P R GR++ ++++ V +
Sbjct: 27 LEPLIIQVTTLVNCPQNPSSRKKGRSKRASVLLASVEE 64
>AF013263-1|AAC51678.1| 1194|Homo sapiens apoptotic protease
activating factor 1 protein.
Length = 1194
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 60 VWMFGVISPITDPRHHNGSVLCTA 131
+W F ++ P+ + R HNG V C+A
Sbjct: 1057 IWSFDLLLPLHELRGHNGCVRCSA 1080
>AB007873-1|BAA24843.2| 1237|Homo sapiens KIAA0413 protein.
Length = 1237
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 60 VWMFGVISPITDPRHHNGSVLCTA 131
+W F ++ P+ + R HNG V C+A
Sbjct: 1100 IWSFDLLLPLHELRGHNGCVRCSA 1123
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,984,713
Number of Sequences: 237096
Number of extensions: 2078247
Number of successful extensions: 9031
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 5510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8987
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -