Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_M01
         (482 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   1.3  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   1.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   1.7  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   3.0  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   4.0  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   4.0  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    21   9.1  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    21   9.1  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   9.1  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   9.1  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 321 HYQIYSCIYPSPPG 280
           H Q+YSC+  SP G
Sbjct: 75  HAQVYSCLARSPAG 88


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = -3

Query: 348 YCPSRRNLSHYQIYSCIYPSPPGGEGLPGQIRPPPHNHY 232
           Y P + + S Y  +    P    G    G    PPH+H+
Sbjct: 316 YHPHQHHPSQYHPHRGSSPHHQHGNHTMGPTMGPPHHHH 354


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 223  MEGLCHRPFTPW 188
            MEG+ H PFTP+
Sbjct: 1150 MEGMPHLPFTPF 1161


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 227 GNGRSMPPPLHPLVCQYG 174
           GNG  + P +H  +C  G
Sbjct: 360 GNGNILSPSIHDNICSNG 377


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 345 CPSRRNLSHYQIYSC 301
           C  R +  HY +YSC
Sbjct: 113 CGDRASGKHYGVYSC 127


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 345 CPSRRNLSHYQIYSC 301
           C  R +  HY +YSC
Sbjct: 113 CGDRASGKHYGVYSC 127


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 411 YSYQINHNNCITDNY 367
           Y Y  N+NN   +NY
Sbjct: 94  YKYNYNNNNYNNNNY 108


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 411 YSYQINHNNCITDNY 367
           Y Y  N+NN   +NY
Sbjct: 94  YKYNYNNNNYNNNNY 108


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 411 YSYQINHNNCITDNY 367
           Y Y  N+NN   +NY
Sbjct: 329 YKYNYNNNNYNNNNY 343


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -3

Query: 201 PSPLGLPIRQSTVLP 157
           P  L +P+R++ +LP
Sbjct: 451 PLDLAIPVRETLILP 465


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,742
Number of Sequences: 438
Number of extensions: 4399
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)