Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_L22
(553 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 197 5e-51
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 197 5e-51
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 197 5e-51
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 197 5e-51
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 197 5e-51
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 197 5e-51
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 197 5e-51
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 197 5e-51
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 197 5e-51
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 191 3e-49
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 189 1e-48
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 111 3e-25
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 107 5e-24
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 82 2e-16
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 73 1e-13
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 69 3e-12
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 44 1e-04
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 29 1.7
AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical ... 27 6.8
U41540-7|AAM54182.1| 930|Caenorhabditis elegans Hypothetical pr... 27 9.0
U41540-6|AAM54183.1| 934|Caenorhabditis elegans Hypothetical pr... 27 9.0
AL110484-22|CAB54414.2| 305|Caenorhabditis elegans Hypothetical... 27 9.0
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 27 9.0
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 197 bits (480), Expect = 5e-51
Identities = 91/92 (98%), Positives = 92/92 (100%)
Frame = +1
Query: 10 KCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 189
KCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG
Sbjct: 285 KCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 344
Query: 190 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 285
SILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 345 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 197 bits (480), Expect = 5e-51
Identities = 91/92 (98%), Positives = 92/92 (100%)
Frame = +1
Query: 10 KCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 189
KCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG
Sbjct: 285 KCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 344
Query: 190 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 285
SILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 345 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 197 bits (480), Expect = 5e-51
Identities = 91/92 (98%), Positives = 92/92 (100%)
Frame = +1
Query: 10 KCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 189
KCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG
Sbjct: 285 KCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 344
Query: 190 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 285
SILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 345 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 197 bits (480), Expect = 5e-51
Identities = 91/92 (98%), Positives = 92/92 (100%)
Frame = +1
Query: 10 KCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 189
KCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG
Sbjct: 285 KCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 344
Query: 190 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 285
SILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 345 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 197 bits (480), Expect = 5e-51
Identities = 91/92 (98%), Positives = 92/92 (100%)
Frame = +1
Query: 10 KCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 189
KCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG
Sbjct: 285 KCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 344
Query: 190 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 285
SILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 345 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 197 bits (480), Expect = 5e-51
Identities = 91/92 (98%), Positives = 92/92 (100%)
Frame = +1
Query: 10 KCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 189
KCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG
Sbjct: 285 KCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 344
Query: 190 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 285
SILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 345 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 197 bits (480), Expect = 5e-51
Identities = 91/92 (98%), Positives = 92/92 (100%)
Frame = +1
Query: 10 KCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 189
KCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG
Sbjct: 241 KCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 300
Query: 190 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 285
SILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 301 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 197 bits (480), Expect = 5e-51
Identities = 91/92 (98%), Positives = 92/92 (100%)
Frame = +1
Query: 10 KCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 189
KCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG
Sbjct: 271 KCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 330
Query: 190 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 285
SILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 331 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 197 bits (480), Expect = 5e-51
Identities = 91/92 (98%), Positives = 92/92 (100%)
Frame = +1
Query: 10 KCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 189
KCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG
Sbjct: 285 KCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 344
Query: 190 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 285
SILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 345 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 191 bits (465), Expect = 3e-49
Identities = 90/92 (97%), Positives = 91/92 (98%)
Frame = +1
Query: 10 KCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 189
KCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGG
Sbjct: 285 KCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGG 343
Query: 190 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 285
SILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 344 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 189 bits (461), Expect = 1e-48
Identities = 88/92 (95%), Positives = 90/92 (97%)
Frame = +1
Query: 10 KCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 189
KCDVDIRKDLYANTVLSGGT+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGG
Sbjct: 284 KCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGG 343
Query: 190 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 285
SILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 344 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 111 bits (267), Expect = 3e-25
Identities = 48/92 (52%), Positives = 68/92 (73%)
Frame = +1
Query: 10 KCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 189
KCDVD+R+ LY+N VLSGGTT++ G DR+ E+ +AP+ KI+I A ER WIGG
Sbjct: 283 KCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGG 342
Query: 190 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 285
SI+ASL TF++MW+ K+EY++ G S +H++ F
Sbjct: 343 SIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 107 bits (257), Expect = 5e-24
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
Frame = +1
Query: 16 DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIG 186
D+DIR L++N ++GG ++ G +R+ + P T+K+++ A P ERKY WIG
Sbjct: 344 DIDIRPTLFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIG 403
Query: 187 GSILASLSTFQQMWISKQEYDESGPSIVHRKC 282
GSIL SL TFQQMW+SK EYDESG SIV +KC
Sbjct: 404 GSILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 82.2 bits (194), Expect = 2e-16
Identities = 43/94 (45%), Positives = 59/94 (62%), Gaps = 13/94 (13%)
Frame = +1
Query: 16 DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPE 162
D+D R D Y + VLSGGTTMYPG+ R++KE+ L A KI+I APP
Sbjct: 290 DIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPS 349
Query: 163 RKYSVWIGGSILASL--STFQQMWISKQEYDESG 258
RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 350 RKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 73.3 bits (172), Expect = 1e-13
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 16/102 (15%)
Frame = +1
Query: 10 KCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA----------------PSTMKI 141
+C +D+R+ LY N VLSGG+TM+ A ++Q+++ L+ P + +
Sbjct: 313 QCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDV 372
Query: 142 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 267
++I+ ++Y+VW GGS+LAS S F Q+ +K EY E GPSI
Sbjct: 373 QVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 68.5 bits (160), Expect = 3e-12
Identities = 28/78 (35%), Positives = 52/78 (66%)
Frame = +1
Query: 10 KCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 189
+C +D R+ LY N L+GG ++ PGIA+++++E++ + P+T+ ++ P R + ++G
Sbjct: 462 QCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGA 521
Query: 190 SILASLSTFQQMWISKQE 243
I+AS STF+ IS Q+
Sbjct: 522 QIVASASTFEDSCISLQQ 539
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 46.8 bits (106), Expect = 1e-05
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 10/89 (11%)
Frame = +1
Query: 10 KCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK-- 168
KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 200 KCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIKNT 259
Query: 169 --YSVWIGGSILASL-STFQQMWISKQEY 246
+ W+G S+L SL T ++ ++ +E+
Sbjct: 260 PLFVSWLGASLLGSLRETIERKSLTLEEW 288
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/101 (24%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Frame = +1
Query: 10 KCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVW 180
+C +R L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+ W
Sbjct: 299 QCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSW 356
Query: 181 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*ALCAS 303
G L L+ + WI+++++DE G S+ F L S
Sbjct: 357 HCGQEL--LTASKVPWINRKDWDERGDSLEFSNFFQTLVQS 395
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/101 (24%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Frame = +1
Query: 10 KCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVW 180
+C +R L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+ W
Sbjct: 299 QCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSW 356
Query: 181 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*ALCAS 303
G L L+ + WI+++++DE G S+ F L S
Sbjct: 357 HCGQEL--LTASKVPWINRKDWDERGDSLEFSNFFQTLVQS 395
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -3
Query: 335 RSTEPRAAGGSDAHSA*KHFLCTIEGPDSSYSCFEIHICWK 213
++ P AAG S + SA +CT+EG S S + C K
Sbjct: 60 QTPNPNAAGASASGSANYKLMCTLEGHTKSISSAKFSPCGK 100
>AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical
protein Y87G2A.5 protein.
Length = 1050
Score = 27.5 bits (58), Expect = 6.8
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 57 VWWYHHVPWYCRPYAEGNHSP 119
+WW H +P Y +A+G P
Sbjct: 507 LWWGHRIPAYYISFADGREQP 527
>U41540-7|AAM54182.1| 930|Caenorhabditis elegans Hypothetical
protein F35H12.2a protein.
Length = 930
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +3
Query: 111 HSPRSIHDEDQNHRATREEVFCMDRWIDPRLPLY--LPADVDLETGI*RVRPLDCAQEVL 284
HS + + D+N T VF ++ DPR+ ++ L + +T + +D +
Sbjct: 225 HSDLQLLEMDRNATGTDSAVFVIEANWDPRVHMFEVLNTETPRDTRVFMTVAIDVIVSEI 284
Query: 285 LSAVRIAASSSPRFGRSHDR 344
+R + + R H+R
Sbjct: 285 SEPIRFSMEAMSRVFHEHER 304
>U41540-6|AAM54183.1| 934|Caenorhabditis elegans Hypothetical
protein F35H12.2b protein.
Length = 934
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +3
Query: 111 HSPRSIHDEDQNHRATREEVFCMDRWIDPRLPLY--LPADVDLETGI*RVRPLDCAQEVL 284
HS + + D+N T VF ++ DPR+ ++ L + +T + +D +
Sbjct: 225 HSDLQLLEMDRNATGTDSAVFVIEANWDPRVHMFEVLNTETPRDTRVFMTVAIDVIVSEI 284
Query: 285 LSAVRIAASSSPRFGRSHDR 344
+R + + R H+R
Sbjct: 285 SEPIRFSMEAMSRVFHEHER 304
>AL110484-22|CAB54414.2| 305|Caenorhabditis elegans Hypothetical
protein Y38E10A.22 protein.
Length = 305
Score = 27.1 bits (57), Expect = 9.0
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = -3
Query: 206 REARIDPPIHTEYF--LSGGAMILIFIVDGARAVISFCIRSAIPGYMVVPPDNTVLAYKS 33
++A D P+ T Y L A + I+ + IS +RS +P Y+ N + A +
Sbjct: 26 QQAIADSPLFTAYMKLLKRQAELSPRILSALLSAISSIVRSHLPAYLKFQAKNGLTATEK 85
Query: 32 LRMST 18
L ST
Sbjct: 86 LIQST 90
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.1 bits (57), Expect = 9.0
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +1
Query: 160 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*ALCASLPPAAR 321
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,272,078
Number of Sequences: 27780
Number of extensions: 245932
Number of successful extensions: 654
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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