Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_L21
         (473 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    23   1.7  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   2.2  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   3.8  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   6.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   8.9  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    21   8.9  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   8.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   8.9  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   8.9  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   8.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   8.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   8.9  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   8.9  

>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +2

Query: 293 SDIHKITERNKIHRL 337
           S +H +TERNK+ RL
Sbjct: 129 SFLHDVTERNKLVRL 143


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = +2

Query: 122 EAFRK*SSKYESARGTKTSAS---EFRVYAASSRN 217
           EAF++  +K   ARG + S S   EFR      RN
Sbjct: 334 EAFKRILTKGARARGNQPSTSECGEFRSVVVQKRN 368


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -2

Query: 127 GFGSSPSSESDTTGTVFTDNSISFCKIGFDI 35
           GFG+  ++ +D++G V   N ++     FD+
Sbjct: 419 GFGAYCAAHTDSSGAVKIVNMLNQLYTAFDV 449


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 162 RALSYFELYLRKASAHHHLQ 103
           R  S    Y+  A+AHHH Q
Sbjct: 83  RTTSSMYPYVSAAAAHHHHQ 102


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -1

Query: 191 ETLKHWFLCHGRSHTLSSIYERLRLITIFRI 99
           + LKH  L  G+  T+ +   R + + +FR+
Sbjct: 82  QLLKHGMLPRGQVFTMMNKEMRHQAVVLFRL 112


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 355 RNKHP*LISTKNPL 396
           R+K P +IS  NPL
Sbjct: 75  RSKEPKIISNNNPL 88


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = -2

Query: 127 GFGSSPSSESDTTGTVFTDNSISFCKIGFDI 35
           GFG+  ++ +D++G +   N ++     FD+
Sbjct: 419 GFGAYCAAHTDSSGAMKIVNMLNQLYTAFDV 449


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -1

Query: 191 ETLKHWFLCHGRSHTLSSIYERLRLITIFRI 99
           + LKH  L  G+  T+ +   R + + +FR+
Sbjct: 82  QLLKHGMLPRGQVFTMMNKEMRHQAVVLFRL 112


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 323 KIHRLRRLHRGE 358
           K+HR  R+H GE
Sbjct: 162 KLHRHMRIHTGE 173


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/37 (21%), Positives = 19/37 (51%)
 Frame = +3

Query: 321 IKSTDYVDCIEEKQAPLADINEESSDNIYAIIEESPI 431
           I   D  +CIE+     AD+     +++Y  ++++ +
Sbjct: 63  ISGRDRYECIEKVGKKEADVVAVDPEDMYLAVKDNKL 99


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/37 (21%), Positives = 19/37 (51%)
 Frame = +3

Query: 321 IKSTDYVDCIEEKQAPLADINEESSDNIYAIIEESPI 431
           I   D  +CIE+     AD+     +++Y  ++++ +
Sbjct: 63  ISGRDRYECIEKVGKKEADVVAVDPEDMYLAVKDNKL 99


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/37 (21%), Positives = 19/37 (51%)
 Frame = +3

Query: 321 IKSTDYVDCIEEKQAPLADINEESSDNIYAIIEESPI 431
           I   D  +CIE+     AD+     +++Y  ++++ +
Sbjct: 63  ISGRDRYECIEKVGKKEADVVAVDPEDMYLAVKDNKL 99


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +2

Query: 161 RGTKTSASEFRVYAASSRNA*TSFNGRP 244
           R   TS  E+R+     + A T + G P
Sbjct: 399 RDAFTSKGEYRMSTGEMKEAITQWQGNP 426


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,294
Number of Sequences: 438
Number of extensions: 2821
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)