Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_L19
         (551 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98949-1|CAI17892.1| 2566|Homo sapiens protein ( Human DNA seque...    32   1.2  
AL080245-1|CAI16965.1| 2566|Homo sapiens protein ( Human DNA seq...    32   1.2  
AL079300-1|CAI17881.1| 2566|Homo sapiens protein ( Human DNA seq...    32   1.2  
AL022329-3|CAI17968.1| 2566|Homo sapiens protein ( Human DNA seq...    32   1.2  
AJ310932-1|CAC70714.3| 2567|Homo sapiens myosin heavy chain prot...    32   1.2  
AB075376-1|BAC16363.1| 2567|Homo sapiens bk125H2.1 protein.            32   1.2  
AB042648-1|BAB55550.2| 2080|Homo sapiens bk125H2.1 protein.            32   1.2  

>Z98949-1|CAI17892.1| 2566|Homo sapiens protein ( Human DNA sequence
            from clone CTA-125H2 on chromosome 22q11-12. ).
          Length = 2566

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
 Frame = -2

Query: 232  GMGAIRDCKA---CYVFPSLGCRPFRCTVYEIHGLVHRANHALTNLMNKSNLHQ-KRNIC 65
            G  A+R C+    C +F  LG  P R   Y++ G +HRA   L+ L     LHQ KR   
Sbjct: 1070 GSSALRTCEQPLQCEIFHQLGWDPVR---YDLTGWLHRAKPNLSALDAPQVLHQSKREEL 1126

Query: 64   STIF 53
             ++F
Sbjct: 1127 RSLF 1130


>AL080245-1|CAI16965.1| 2566|Homo sapiens protein ( Human DNA sequence
            from clone RP11-89B2 on chromosome 22. ).
          Length = 2566

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
 Frame = -2

Query: 232  GMGAIRDCKA---CYVFPSLGCRPFRCTVYEIHGLVHRANHALTNLMNKSNLHQ-KRNIC 65
            G  A+R C+    C +F  LG  P R   Y++ G +HRA   L+ L     LHQ KR   
Sbjct: 1070 GSSALRTCEQPLQCEIFHQLGWDPVR---YDLTGWLHRAKPNLSALDAPQVLHQSKREEL 1126

Query: 64   STIF 53
             ++F
Sbjct: 1127 RSLF 1130


>AL079300-1|CAI17881.1| 2566|Homo sapiens protein ( Human DNA sequence
            from clone CTA-109D1 on chromosome 22. ).
          Length = 2566

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
 Frame = -2

Query: 232  GMGAIRDCKA---CYVFPSLGCRPFRCTVYEIHGLVHRANHALTNLMNKSNLHQ-KRNIC 65
            G  A+R C+    C +F  LG  P R   Y++ G +HRA   L+ L     LHQ KR   
Sbjct: 1070 GSSALRTCEQPLQCEIFHQLGWDPVR---YDLTGWLHRAKPNLSALDAPQVLHQSKREEL 1126

Query: 64   STIF 53
             ++F
Sbjct: 1127 RSLF 1130


>AL022329-3|CAI17968.1| 2566|Homo sapiens protein ( Human DNA sequence
            from clone CTA-407F11 on chromosome 22q12. ).
          Length = 2566

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
 Frame = -2

Query: 232  GMGAIRDCKA---CYVFPSLGCRPFRCTVYEIHGLVHRANHALTNLMNKSNLHQ-KRNIC 65
            G  A+R C+    C +F  LG  P R   Y++ G +HRA   L+ L     LHQ KR   
Sbjct: 1070 GSSALRTCEQPLQCEIFHQLGWDPVR---YDLTGWLHRAKPNLSALDAPQVLHQSKREEL 1126

Query: 64   STIF 53
             ++F
Sbjct: 1127 RSLF 1130


>AJ310932-1|CAC70714.3| 2567|Homo sapiens myosin heavy chain protein.
          Length = 2567

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
 Frame = -2

Query: 232  GMGAIRDCKA---CYVFPSLGCRPFRCTVYEIHGLVHRANHALTNLMNKSNLHQ-KRNIC 65
            G  A+R C+    C +F  LG  P R   Y++ G +HRA   L+ L     LHQ KR   
Sbjct: 1070 GSSALRTCEQPLQCEIFHQLGWDPVR---YDLTGWLHRAKPNLSALDAPQVLHQSKREEL 1126

Query: 64   STIF 53
             ++F
Sbjct: 1127 RSLF 1130


>AB075376-1|BAC16363.1| 2567|Homo sapiens bk125H2.1 protein.
          Length = 2567

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
 Frame = -2

Query: 232  GMGAIRDCKA---CYVFPSLGCRPFRCTVYEIHGLVHRANHALTNLMNKSNLHQ-KRNIC 65
            G  A+R C+    C +F  LG  P R   Y++ G +HRA   L+ L     LHQ KR   
Sbjct: 1070 GSSALRTCEQPLQCEIFHQLGWDPVR---YDLTGWLHRAKPNLSALDAPQVLHQSKREEL 1126

Query: 64   STIF 53
             ++F
Sbjct: 1127 RSLF 1130


>AB042648-1|BAB55550.2| 2080|Homo sapiens bk125H2.1 protein.
          Length = 2080

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
 Frame = -2

Query: 232 GMGAIRDCKA---CYVFPSLGCRPFRCTVYEIHGLVHRANHALTNLMNKSNLHQ-KRNIC 65
           G  A+R C+    C +F  LG  P R   Y++ G +HRA   L+ L     LHQ KR   
Sbjct: 583 GSSALRTCEQPLQCEIFHQLGWDPVR---YDLTGWLHRAKPNLSALDAPQVLHQSKREEL 639

Query: 64  STIF 53
            ++F
Sbjct: 640 RSLF 643


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,055,850
Number of Sequences: 237096
Number of extensions: 2110179
Number of successful extensions: 3881
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3881
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5477474182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)