Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_L18
(659 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 284 2e-76
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 284 2e-76
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 284 2e-76
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 284 2e-76
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 284 2e-76
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 284 2e-76
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 284 2e-76
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 284 2e-76
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 282 9e-76
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 277 2e-74
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 275 8e-74
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 275 8e-74
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 275 8e-74
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 275 8e-74
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 275 8e-74
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 275 8e-74
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 262 8e-70
Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4 prot... 67 6e-11
AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein. 32 1.6
BC064028-1|AAH64028.1| 237|Homo sapiens immediate early respons... 32 2.1
AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens ... 32 2.1
AL158151-18|CAI12875.1| 404|Homo sapiens immediate early respon... 31 3.6
AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens ... 31 3.6
U14518-1|AAA57416.1| 140|Homo sapiens centromere protein-A prot... 31 4.8
BT007246-1|AAP35910.1| 140|Homo sapiens centromere protein A, 1... 31 4.8
BC046248-1|AAH46248.1| 503|Homo sapiens similar to CG32656-PA p... 31 4.8
BC002703-1|AAH02703.1| 140|Homo sapiens CENPA protein protein. 31 4.8
BC000881-1|AAH00881.1| 114|Homo sapiens centromere protein A pr... 31 4.8
AC011740-3|AAX93267.1| 140|Homo sapiens unknown protein. 31 4.8
AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta ch... 30 6.4
BC001760-1|AAH01760.1| 567|Homo sapiens replication initiator 1... 30 8.4
BC000363-1|AAH00363.2| 556|Homo sapiens replication initiator 1... 30 8.4
AJ404468-1|CAB94756.1| 4486|Homo sapiens axonemal dynein heavy c... 30 8.4
AJ245553-1|CAB53100.1| 556|Homo sapiens AP4 protein protein. 30 8.4
AF257737-1|AAF69004.1| 4486|Homo sapiens ciliary dynein heavy ch... 30 8.4
AC005586-2|AAS00386.1| 556|Homo sapiens unknown protein. 30 8.4
AC005586-1|AAS00385.1| 567|Homo sapiens unknown protein. 30 8.4
AB002355-1|BAA21573.2| 2992|Homo sapiens KIAA0357 protein. 30 8.4
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 284 bits (696), Expect = 2e-76
Identities = 126/168 (75%), Positives = 146/168 (86%)
Frame = +3
Query: 156 YAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVA*GFVKQRLIKVDGKVRTDPTYPAG 335
+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV QR IK+DGKVRTD TYPAG
Sbjct: 27 FAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVK-KICMQRFIKIDGKVRTDITYPAG 85
Query: 336 FMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCNVRRVATGPKSVPYLVTHDGR 515
FMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC VR++ G K +P+LVTHD R
Sbjct: 86 FMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDAR 145
Query: 516 TLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGDLCMITGGRNLGRVG 659
T+RYPDPLIKVND++Q+D+ T KI DFIKFD+G+LCM+TGG NLGR+G
Sbjct: 146 TIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 39.5 bits (88), Expect = 0.010
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 70 MARGPKKHLKRLNAPKAWM 126
MARGPKKHLKR+ APK WM
Sbjct: 1 MARGPKKHLKRVAAPKHWM 19
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 284 bits (696), Expect = 2e-76
Identities = 126/168 (75%), Positives = 146/168 (86%)
Frame = +3
Query: 156 YAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVA*GFVKQRLIKVDGKVRTDPTYPAG 335
+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV QR IK+DGKVRTD TYPAG
Sbjct: 27 FAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVK-KICMQRFIKIDGKVRTDITYPAG 85
Query: 336 FMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCNVRRVATGPKSVPYLVTHDGR 515
FMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC VR++ G K +P+LVTHD R
Sbjct: 86 FMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDAR 145
Query: 516 TLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGDLCMITGGRNLGRVG 659
T+RYPDPLIKVND++Q+D+ T KI DFIKFD+G+LCM+TGG NLGR+G
Sbjct: 146 TIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 39.5 bits (88), Expect = 0.010
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 70 MARGPKKHLKRLNAPKAWM 126
MARGPKKHLKR+ APK WM
Sbjct: 1 MARGPKKHLKRVAAPKHWM 19
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 284 bits (696), Expect = 2e-76
Identities = 126/168 (75%), Positives = 146/168 (86%)
Frame = +3
Query: 156 YAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVA*GFVKQRLIKVDGKVRTDPTYPAG 335
+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV QR IK+DGKVRTD TYPAG
Sbjct: 27 FAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVK-KICMQRFIKIDGKVRTDITYPAG 85
Query: 336 FMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCNVRRVATGPKSVPYLVTHDGR 515
FMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC VR++ G K +P+LVTHD R
Sbjct: 86 FMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDAR 145
Query: 516 TLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGDLCMITGGRNLGRVG 659
T+RYPDPLIKVND++Q+D+ T KI DFIKFD+G+LCM+TGG NLGR+G
Sbjct: 146 TIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 39.5 bits (88), Expect = 0.010
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 70 MARGPKKHLKRLNAPKAWM 126
MARGPKKHLKR+ APK WM
Sbjct: 1 MARGPKKHLKRVAAPKHWM 19
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 284 bits (696), Expect = 2e-76
Identities = 126/168 (75%), Positives = 146/168 (86%)
Frame = +3
Query: 156 YAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVA*GFVKQRLIKVDGKVRTDPTYPAG 335
+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV QR IK+DGKVRTD TYPAG
Sbjct: 27 FAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVK-KICMQRFIKIDGKVRTDITYPAG 85
Query: 336 FMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCNVRRVATGPKSVPYLVTHDGR 515
FMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC VR++ G K +P+LVTHD R
Sbjct: 86 FMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDAR 145
Query: 516 TLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGDLCMITGGRNLGRVG 659
T+RYPDPLIKVND++Q+D+ T KI DFIKFD+G+LCM+TGG NLGR+G
Sbjct: 146 TIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 39.5 bits (88), Expect = 0.010
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 70 MARGPKKHLKRLNAPKAWM 126
MARGPKKHLKR+ APK WM
Sbjct: 1 MARGPKKHLKRVAAPKHWM 19
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 284 bits (696), Expect = 2e-76
Identities = 126/168 (75%), Positives = 146/168 (86%)
Frame = +3
Query: 156 YAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVA*GFVKQRLIKVDGKVRTDPTYPAG 335
+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV QR IK+DGKVRTD TYPAG
Sbjct: 27 FAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVK-KICMQRFIKIDGKVRTDITYPAG 85
Query: 336 FMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCNVRRVATGPKSVPYLVTHDGR 515
FMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC VR++ G K +P+LVTHD R
Sbjct: 86 FMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDAR 145
Query: 516 TLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGDLCMITGGRNLGRVG 659
T+RYPDPLIKVND++Q+D+ T KI DFIKFD+G+LCM+TGG NLGR+G
Sbjct: 146 TIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 39.5 bits (88), Expect = 0.010
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 70 MARGPKKHLKRLNAPKAWM 126
MARGPKKHLKR+ APK WM
Sbjct: 1 MARGPKKHLKRVAAPKHWM 19
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 284 bits (696), Expect = 2e-76
Identities = 126/168 (75%), Positives = 146/168 (86%)
Frame = +3
Query: 156 YAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVA*GFVKQRLIKVDGKVRTDPTYPAG 335
+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV QR IK+DGKVRTD TYPAG
Sbjct: 7 FAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVK-KICMQRFIKIDGKVRTDITYPAG 65
Query: 336 FMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCNVRRVATGPKSVPYLVTHDGR 515
FMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC VR++ G K +P+LVTHD R
Sbjct: 66 FMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDAR 125
Query: 516 TLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGDLCMITGGRNLGRVG 659
T+RYPDPLIKVND++Q+D+ T KI DFIKFD+G+LCM+TGG NLGR+G
Sbjct: 126 TIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 173
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 284 bits (696), Expect = 2e-76
Identities = 126/168 (75%), Positives = 146/168 (86%)
Frame = +3
Query: 156 YAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVA*GFVKQRLIKVDGKVRTDPTYPAG 335
+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV QR IK+DGKVRTD TYPAG
Sbjct: 27 FAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVK-KICMQRFIKIDGKVRTDITYPAG 85
Query: 336 FMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCNVRRVATGPKSVPYLVTHDGR 515
FMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC VR++ G K +P+LVTHD R
Sbjct: 86 FMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDAR 145
Query: 516 TLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGDLCMITGGRNLGRVG 659
T+RYPDPLIKVND++Q+D+ T KI DFIKFD+G+LCM+TGG NLGR+G
Sbjct: 146 TIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 39.5 bits (88), Expect = 0.010
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 70 MARGPKKHLKRLNAPKAWM 126
MARGPKKHLKR+ APK WM
Sbjct: 1 MARGPKKHLKRVAAPKHWM 19
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 284 bits (696), Expect = 2e-76
Identities = 126/168 (75%), Positives = 146/168 (86%)
Frame = +3
Query: 156 YAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVA*GFVKQRLIKVDGKVRTDPTYPAG 335
+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV QR IK+DGKVRTD TYPAG
Sbjct: 27 FAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVK-KICMQRFIKIDGKVRTDITYPAG 85
Query: 336 FMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCNVRRVATGPKSVPYLVTHDGR 515
FMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC VR++ G K +P+LVTHD R
Sbjct: 86 FMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDAR 145
Query: 516 TLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGDLCMITGGRNLGRVG 659
T+RYPDPLIKVND++Q+D+ T KI DFIKFD+G+LCM+TGG NLGR+G
Sbjct: 146 TIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 39.5 bits (88), Expect = 0.010
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 70 MARGPKKHLKRLNAPKAWM 126
MARGPKKHLKR+ APK WM
Sbjct: 1 MARGPKKHLKRVAAPKHWM 19
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 282 bits (691), Expect = 9e-76
Identities = 125/168 (74%), Positives = 145/168 (86%)
Frame = +3
Query: 156 YAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVA*GFVKQRLIKVDGKVRTDPTYPAG 335
+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+EV QR IK+DGKVRTD TYPAG
Sbjct: 27 FAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDEVK-KICMQRFIKIDGKVRTDITYPAG 85
Query: 336 FMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCNVRRVATGPKSVPYLVTHDGR 515
FMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC VR++ G K +P+LVTHD R
Sbjct: 86 FMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDAR 145
Query: 516 TLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGDLCMITGGRNLGRVG 659
T+RYPDPLIKVND++Q+D+ T KI DFIKFD+G+LCM+TGG NLGR+G
Sbjct: 146 TIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 39.5 bits (88), Expect = 0.010
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 70 MARGPKKHLKRLNAPKAWM 126
MARGPKKHLKR+ APK WM
Sbjct: 1 MARGPKKHLKRVAAPKHWM 19
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 277 bits (680), Expect = 2e-74
Identities = 125/168 (74%), Positives = 145/168 (86%)
Frame = +3
Query: 156 YAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVA*GFVKQRLIKVDGKVRTDPTYPAG 335
+APRPS GPHKLRECLPL+IFLRNRLKYALTG+EV QR IK+DGKVRTD TYPAG
Sbjct: 9 FAPRPS-GPHKLRECLPLIIFLRNRLKYALTGDEVK-KICMQRFIKIDGKVRTDITYPAG 66
Query: 336 FMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCNVRRVATGPKSVPYLVTHDGR 515
FMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC VR++ G K +P+LVTHD R
Sbjct: 67 FMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDAR 126
Query: 516 TLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGDLCMITGGRNLGRVG 659
T+RYPDPLIKVND++Q+D+ T KI DFIKFD+G+LCM+TGG NLGR+G
Sbjct: 127 TIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 174
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 275 bits (675), Expect = 8e-74
Identities = 122/168 (72%), Positives = 144/168 (85%)
Frame = +3
Query: 156 YAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVA*GFVKQRLIKVDGKVRTDPTYPAG 335
+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV QR IK+DGKVR D TYPAG
Sbjct: 27 FAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVK-KICMQRFIKIDGKVRVDVTYPAG 85
Query: 336 FMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCNVRRVATGPKSVPYLVTHDGR 515
FMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLC VR++ G K +P+LVTHD R
Sbjct: 86 FMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDAR 145
Query: 516 TLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGDLCMITGGRNLGRVG 659
T+RYPDP+IKVND+VQ+D+ T KI++FIKFD+G+LCM+ GG NLGRVG
Sbjct: 146 TIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 193
Score = 39.5 bits (88), Expect = 0.010
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 70 MARGPKKHLKRLNAPKAWM 126
MARGPKKHLKR+ APK WM
Sbjct: 1 MARGPKKHLKRVAAPKHWM 19
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 275 bits (675), Expect = 8e-74
Identities = 122/168 (72%), Positives = 144/168 (85%)
Frame = +3
Query: 156 YAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVA*GFVKQRLIKVDGKVRTDPTYPAG 335
+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV QR IK+DGKVR D TYPAG
Sbjct: 26 FAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVK-KICMQRFIKIDGKVRVDVTYPAG 84
Query: 336 FMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCNVRRVATGPKSVPYLVTHDGR 515
FMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLC VR++ G K +P+LVTHD R
Sbjct: 85 FMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDAR 144
Query: 516 TLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGDLCMITGGRNLGRVG 659
T+RYPDP+IKVND+VQ+D+ T KI++FIKFD+G+LCM+ GG NLGRVG
Sbjct: 145 TIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 192
Score = 37.5 bits (83), Expect = 0.042
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 73 ARGPKKHLKRLNAPKAWM 126
ARGPKKHLKR+ APK WM
Sbjct: 1 ARGPKKHLKRVAAPKHWM 18
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 275 bits (675), Expect = 8e-74
Identities = 122/168 (72%), Positives = 144/168 (85%)
Frame = +3
Query: 156 YAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVA*GFVKQRLIKVDGKVRTDPTYPAG 335
+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV QR IK+DGKVR D TYPAG
Sbjct: 27 FAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVK-KICMQRFIKIDGKVRVDVTYPAG 85
Query: 336 FMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCNVRRVATGPKSVPYLVTHDGR 515
FMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLC VR++ G K +P+LVTHD R
Sbjct: 86 FMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDAR 145
Query: 516 TLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGDLCMITGGRNLGRVG 659
T+RYPDP+IKVND+VQ+D+ T KI++FIKFD+G+LCM+ GG NLGRVG
Sbjct: 146 TIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 193
Score = 39.5 bits (88), Expect = 0.010
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 70 MARGPKKHLKRLNAPKAWM 126
MARGPKKHLKR+ APK WM
Sbjct: 1 MARGPKKHLKRVAAPKHWM 19
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 275 bits (675), Expect = 8e-74
Identities = 122/168 (72%), Positives = 144/168 (85%)
Frame = +3
Query: 156 YAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVA*GFVKQRLIKVDGKVRTDPTYPAG 335
+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV QR IK+DGKVR D TYPAG
Sbjct: 27 FAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVK-KICMQRFIKIDGKVRVDVTYPAG 85
Query: 336 FMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCNVRRVATGPKSVPYLVTHDGR 515
FMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLC VR++ G K +P+LVTHD R
Sbjct: 86 FMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDAR 145
Query: 516 TLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGDLCMITGGRNLGRVG 659
T+RYPDP+IKVND+VQ+D+ T KI++FIKFD+G+LCM+ GG NLGRVG
Sbjct: 146 TIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 193
Score = 39.5 bits (88), Expect = 0.010
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 70 MARGPKKHLKRLNAPKAWM 126
MARGPKKHLKR+ APK WM
Sbjct: 1 MARGPKKHLKRVAAPKHWM 19
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 275 bits (675), Expect = 8e-74
Identities = 122/168 (72%), Positives = 144/168 (85%)
Frame = +3
Query: 156 YAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVA*GFVKQRLIKVDGKVRTDPTYPAG 335
+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV QR IK+DGKVR D TYPAG
Sbjct: 27 FAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVK-KICMQRFIKIDGKVRVDVTYPAG 85
Query: 336 FMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCNVRRVATGPKSVPYLVTHDGR 515
FMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLC VR++ G K +P+LVTHD R
Sbjct: 86 FMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDAR 145
Query: 516 TLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGDLCMITGGRNLGRVG 659
T+RYPDP+IKVND+VQ+D+ T KI++FIKFD+G+LCM+ GG NLGRVG
Sbjct: 146 TIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 193
Score = 39.5 bits (88), Expect = 0.010
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 70 MARGPKKHLKRLNAPKAWM 126
MARGPKKHLKR+ APK WM
Sbjct: 1 MARGPKKHLKRVAAPKHWM 19
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 275 bits (675), Expect = 8e-74
Identities = 122/168 (72%), Positives = 144/168 (85%)
Frame = +3
Query: 156 YAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVA*GFVKQRLIKVDGKVRTDPTYPAG 335
+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV QR IK+DGKVR D TYPAG
Sbjct: 27 FAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVK-KICMQRFIKIDGKVRVDVTYPAG 85
Query: 336 FMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCNVRRVATGPKSVPYLVTHDGR 515
FMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLC VR++ G K +P+LVTHD R
Sbjct: 86 FMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDAR 145
Query: 516 TLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGDLCMITGGRNLGRVG 659
T+RYPDP+IKVND+VQ+D+ T KI++FIKFD+G+LCM+ GG NLGRVG
Sbjct: 146 TIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 193
Score = 39.5 bits (88), Expect = 0.010
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 70 MARGPKKHLKRLNAPKAWM 126
MARGPKKHLKR+ APK WM
Sbjct: 1 MARGPKKHLKRVAAPKHWM 19
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 262 bits (642), Expect = 8e-70
Identities = 116/168 (69%), Positives = 139/168 (82%)
Frame = +3
Query: 156 YAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVA*GFVKQRLIKVDGKVRTDPTYPAG 335
+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV Q +K+DGKVR D TYPAG
Sbjct: 27 FAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVK-KICMQHFLKIDGKVRVDITYPAG 85
Query: 336 FMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCNVRRVATGPKSVPYLVTHDGR 515
F+DV+SIEKT E FRL+Y+ KG F +HRIT EEAKYKLC VR++ G K +P+LVTHD R
Sbjct: 86 FIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLCKVRKITVGTKGIPHLVTHDAR 145
Query: 516 TLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGDLCMITGGRNLGRVG 659
T+RYPDPLIKVND+VQ+D+ T KI FIKFD+G++CM+ G NLGRVG
Sbjct: 146 TIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIAGANLGRVG 193
Score = 39.5 bits (88), Expect = 0.010
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 70 MARGPKKHLKRLNAPKAWM 126
MARGPKKHLKR+ APK WM
Sbjct: 1 MARGPKKHLKRVAAPKHWM 19
>Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4
protein.
Length = 59
Score = 66.9 bits (156), Expect = 6e-11
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +3
Query: 156 YAPRPSTGPHKLRECLPLVIFLRNRLKYAL 245
+APRPSTGPHKLRECLPL+IFLRNRLKYAL
Sbjct: 27 FAPRPSTGPHKLRECLPLIIFLRNRLKYAL 56
Score = 39.5 bits (88), Expect = 0.010
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 70 MARGPKKHLKRLNAPKAWM 126
MARGPKKHLKR+ APK WM
Sbjct: 1 MARGPKKHLKRVAAPKHWM 19
>AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein.
Length = 182
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 321 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCNVRRV 467
+YPA + D I + E+FRL+ + + RI + K C++ RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERV 144
>BC064028-1|AAH64028.1| 237|Homo sapiens immediate early response
5-like protein.
Length = 237
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 551 RLGAARHLHQQDHGLHQVRLRRPLHDHR 634
R AARH Q H LHQ+ L++ LH H+
Sbjct: 103 RESAARHQLHQLHQLHQLHLQQQLHQHQ 130
>AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens
cDNA FLJ39651 fis, clone SMINT2005161, highly similar to
Mus musculus ES18 mRNA. ).
Length = 485
Score = 31.9 bits (69), Expect = 2.1
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = +2
Query: 467 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAAR 568
RDR AV G RRA PVP H G LG R
Sbjct: 142 RDRQWLEAVFGTPRRAGCPVPQRTHAGPSLGEVR 175
>AL158151-18|CAI12875.1| 404|Homo sapiens immediate early response
5-like protein.
Length = 404
Score = 31.1 bits (67), Expect = 3.6
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 560 AARHLHQQDHGLHQVRLRRPLHDHR 634
AARH Q H LHQ+ L++ LH H+
Sbjct: 106 AARHQLHQLHQLHQLHLQQQLHQHQ 130
>AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ14103 fis, clone MAMMA1001073. ).
Length = 182
Score = 31.1 bits (67), Expect = 3.6
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 321 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCNVRRV 467
+YPA + D I + E+FRL+ + + +I + K C++ RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRKICASASAPKTCSIERV 144
>U14518-1|AAA57416.1| 140|Homo sapiens centromere protein-A
protein.
Length = 140
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 467 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 583
R R ++ P + P PGP+ +G LGA+ H H +
Sbjct: 4 RRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BT007246-1|AAP35910.1| 140|Homo sapiens centromere protein A,
17kDa protein.
Length = 140
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 467 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 583
R R ++ P + P PGP+ +G LGA+ H H +
Sbjct: 4 RRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC046248-1|AAH46248.1| 503|Homo sapiens similar to CG32656-PA
protein.
Length = 503
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 473 RPQERAVPGDARRAHAPVPGPAHQG 547
R + PG ARR A VPGPA +G
Sbjct: 257 RLSPESAPGPARRGRASVPGPARRG 281
>BC002703-1|AAH02703.1| 140|Homo sapiens CENPA protein protein.
Length = 140
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 467 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 583
R R ++ P + P PGP+ +G LGA+ H H +
Sbjct: 4 RRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC000881-1|AAH00881.1| 114|Homo sapiens centromere protein A
protein.
Length = 114
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 467 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 583
R R ++ P + P PGP+ +G LGA+ H H +
Sbjct: 4 RRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>AC011740-3|AAX93267.1| 140|Homo sapiens unknown protein.
Length = 140
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 467 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 583
R R ++ P + P PGP+ +G LGA+ H H +
Sbjct: 4 RRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta chain
VJ region protein.
Length = 76
Score = 30.3 bits (65), Expect = 6.4
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 312 TDPTYPAGFM-DVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCNVRRVATG 476
++ TY +GF+ D I + N F + T+ ++PE++ LC+V RV TG
Sbjct: 10 SEATYESGFVIDKFPISRPNLTFSTL-------TVSNMSPEDSSIYLCSVLRVVTG 58
>BC001760-1|AAH01760.1| 567|Homo sapiens replication initiator 1
protein.
Length = 567
Score = 29.9 bits (64), Expect = 8.4
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Frame = +2
Query: 476 PQERAV-PGDA---RRAHAPVPG--PAHQGERLGAARHLHQQDHGLHQVRLRRPLHDHRR 637
PQE A P A + A P PG P H + + A L+ D RL R L H+R
Sbjct: 336 PQESAAEPTPAVPLKPAQEPPPGAPPEHPQDPIEAPPSLYSCDDCGRSFRLERFLRAHQR 395
Query: 638 QESGSR 655
Q +G R
Sbjct: 396 QHTGER 401
>BC000363-1|AAH00363.2| 556|Homo sapiens replication initiator 1
protein.
Length = 556
Score = 29.9 bits (64), Expect = 8.4
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Frame = +2
Query: 476 PQERAV-PGDA---RRAHAPVPG--PAHQGERLGAARHLHQQDHGLHQVRLRRPLHDHRR 637
PQE A P A + A P PG P H + + A L+ D RL R L H+R
Sbjct: 325 PQESAAEPTPAVPLKPAQEPPPGAPPEHPQDPIEAPPSLYSCDDCGRSFRLERFLRAHQR 384
Query: 638 QESGSR 655
Q +G R
Sbjct: 385 QHTGER 390
>AJ404468-1|CAB94756.1| 4486|Homo sapiens axonemal dynein heavy chain
9 protein.
Length = 4486
Score = 29.9 bits (64), Expect = 8.4
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +3
Query: 429 EEAKYKLCNVRRVATGPKSVPYLVTHDG---RTLRYPDPLIKVNDSVQLDISTN-KIMDF 596
E+A +C++ R+ P+ LV G ++L I D Q+ + +I DF
Sbjct: 2801 EDAMRHVCHINRILESPRGNALLVGVGGSGKQSLTRLAAFISSMDVFQITLRKGYQIQDF 2860
Query: 597 IKFDSGDLCMITGGRNLGRV 656
K D LC+ G +NL V
Sbjct: 2861 -KMDLASLCLKAGVKNLNTV 2879
>AJ245553-1|CAB53100.1| 556|Homo sapiens AP4 protein protein.
Length = 556
Score = 29.9 bits (64), Expect = 8.4
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Frame = +2
Query: 476 PQERAV-PGDA---RRAHAPVPG--PAHQGERLGAARHLHQQDHGLHQVRLRRPLHDHRR 637
PQE A P A + A P PG P H + + A L+ D RL R L H+R
Sbjct: 325 PQESAAEPTPAVPLKPAQEPPPGAPPEHPQDPIEAPPSLYSCDDCGRSFRLERFLRAHQR 384
Query: 638 QESGSR 655
Q +G R
Sbjct: 385 QHTGER 390
>AF257737-1|AAF69004.1| 4486|Homo sapiens ciliary dynein heavy chain 9
protein.
Length = 4486
Score = 29.9 bits (64), Expect = 8.4
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +3
Query: 429 EEAKYKLCNVRRVATGPKSVPYLVTHDG---RTLRYPDPLIKVNDSVQLDISTN-KIMDF 596
E+A +C++ R+ P+ LV G ++L I D Q+ + +I DF
Sbjct: 2801 EDAMRHVCHINRILESPRGNALLVGVGGSGKQSLTRLAAFISSMDVFQITLRKGYQIQDF 2860
Query: 597 IKFDSGDLCMITGGRNLGRV 656
K D LC+ G +NL V
Sbjct: 2861 -KMDLASLCLKAGVKNLNTV 2879
>AC005586-2|AAS00386.1| 556|Homo sapiens unknown protein.
Length = 556
Score = 29.9 bits (64), Expect = 8.4
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Frame = +2
Query: 476 PQERAV-PGDA---RRAHAPVPG--PAHQGERLGAARHLHQQDHGLHQVRLRRPLHDHRR 637
PQE A P A + A P PG P H + + A L+ D RL R L H+R
Sbjct: 325 PQESAAEPTPAVPLKPAQEPPPGAPPEHPQDPIEAPPSLYSCDDCGRSFRLERFLRAHQR 384
Query: 638 QESGSR 655
Q +G R
Sbjct: 385 QHTGER 390
>AC005586-1|AAS00385.1| 567|Homo sapiens unknown protein.
Length = 567
Score = 29.9 bits (64), Expect = 8.4
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Frame = +2
Query: 476 PQERAV-PGDA---RRAHAPVPG--PAHQGERLGAARHLHQQDHGLHQVRLRRPLHDHRR 637
PQE A P A + A P PG P H + + A L+ D RL R L H+R
Sbjct: 336 PQESAAEPTPAVPLKPAQEPPPGAPPEHPQDPIEAPPSLYSCDDCGRSFRLERFLRAHQR 395
Query: 638 QESGSR 655
Q +G R
Sbjct: 396 QHTGER 401
>AB002355-1|BAA21573.2| 2992|Homo sapiens KIAA0357 protein.
Length = 2992
Score = 29.9 bits (64), Expect = 8.4
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +3
Query: 429 EEAKYKLCNVRRVATGPKSVPYLVTHDG---RTLRYPDPLIKVNDSVQLDISTN-KIMDF 596
E+A +C++ R+ P+ LV G ++L I D Q+ + +I DF
Sbjct: 1383 EDAMRHVCHINRILESPRGNALLVGVGGSGKQSLTRLAAFISSMDVFQITLRKGYQIQDF 1442
Query: 597 IKFDSGDLCMITGGRNLGRV 656
K D LC+ G +NL V
Sbjct: 1443 -KMDLASLCLKAGVKNLNTV 1461
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,632,694
Number of Sequences: 237096
Number of extensions: 2081504
Number of successful extensions: 15831
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 15577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15813
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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