Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_L15
         (494 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    26   0.19 
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    26   0.19 
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    26   0.19 
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    26   0.19 
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    26   0.19 
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    25   0.44 
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    24   1.0  

>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 222 HYFKSRTLARDQNTDCEKSDTLYQ 151
           HY + R+ +RD+N +  K D  Y+
Sbjct: 230 HYSRERSCSRDRNREYRKKDRRYE 253


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 222 HYFKSRTLARDQNTDCEKSDTLYQ 151
           HY + R+ +RD+N +  K D  Y+
Sbjct: 230 HYSRERSCSRDRNREYRKKDRRYE 253


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 222 HYFKSRTLARDQNTDCEKSDTLYQ 151
           HY + R+ +RD+N +  K D  Y+
Sbjct: 230 HYSRERSCSRDRNREYRKKDRRYE 253


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 222 HYFKSRTLARDQNTDCEKSDTLYQ 151
           HY + R+ +RD+N +  K D  Y+
Sbjct: 230 HYSRERSCSRDRNREYRKKDRRYE 253


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 222 HYFKSRTLARDQNTDCEKSDTLYQ 151
           HY + R+ +RD+N +  K D  Y+
Sbjct: 219 HYSRERSCSRDRNREYRKKDRRYE 242


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -3

Query: 222 HYFKSRTLARDQNTDCEKSDTLYQ 151
           HY + R+ +RD+N + ++ D  Y+
Sbjct: 230 HYSRERSCSRDRNREYKEKDRRYE 253


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +1

Query: 70  RKFHPIMSCKDVMTYAKSFYYDPFKWSLVKS 162
           R++ P   CK    +A   YY  +    V+S
Sbjct: 415 RRYQPAFRCKPSQRFASGRYYSAYSLHHVRS 445


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,051
Number of Sequences: 438
Number of extensions: 2693
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)