Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_L08
         (1161 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    32   0.028
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   4.2  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    24   9.7  

>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 32.3 bits (70), Expect = 0.028
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 170 NT*IAQITPNNFLFYMRPPVVGHFFEFPPKR 262
           N  ++ +TPN F FYM PP++     F P R
Sbjct: 295 NLHVSPLTPNTFFFYMLPPIILDAGYFMPNR 325


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.0 bits (52), Expect = 4.2
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -1

Query: 672 AGXKRGGDXCVRGTRLCGNAGFPKG 598
           AG   GG  CV G+R  G  G   G
Sbjct: 516 AGGGGGGSGCVNGSRTVGAGGMAGG 540


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
            protein protein.
          Length = 308

 Score = 23.8 bits (49), Expect = 9.7
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -3

Query: 1087 PLDRASCGREAGGNS*PGRSXR 1022
            P DR  CG  AG N  P R  R
Sbjct: 121  PFDRVVCGDFAGPNGCPRRRGR 142


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,080,086
Number of Sequences: 2352
Number of extensions: 19870
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 130799040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)