Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_L08
         (1161 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X67923-1|CAB94199.1|  290|Homo sapiens tryptophanyl-tRNA synthet...    31   7.9  
X62570-1|CAA44450.1|  471|Homo sapiens IFP53 protein.                  31   7.9  
X59892-1|CAA42545.1|  471|Homo sapiens 471 aa polypeptide (gamma...    31   7.9  
M77804-1|AAA67324.1|  471|Homo sapiens transfer RNA-Trp syntheta...    31   7.9  
M61715-1|AAA61298.1|  471|Homo sapiens transfer RNA-Trp syntheta...    31   7.9  
BC095453-1|AAH95453.1|  471|Homo sapiens WARS protein protein.         31   7.9  
BC017489-1|AAH17489.1|  471|Homo sapiens tryptophanyl-tRNA synth...    31   7.9  

>X67923-1|CAB94199.1|  290|Homo sapiens tryptophanyl-tRNA
          synthetase protein.
          Length = 290

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = +3

Query: 18 KSVFKVPLIIQLTDDEK 68
          + VF VPL+IQ+TDDEK
Sbjct: 3  QDVFNVPLVIQMTDDEK 19


>X62570-1|CAA44450.1|  471|Homo sapiens IFP53 protein.
          Length = 471

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = +3

Query: 18  KSVFKVPLIIQLTDDEK 68
           + VF VPL+IQ+TDDEK
Sbjct: 184 QDVFNVPLVIQMTDDEK 200


>X59892-1|CAA42545.1|  471|Homo sapiens 471 aa polypeptide (gamma2)
           protein.
          Length = 471

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = +3

Query: 18  KSVFKVPLIIQLTDDEK 68
           + VF VPL+IQ+TDDEK
Sbjct: 184 QDVFNVPLVIQMTDDEK 200


>M77804-1|AAA67324.1|  471|Homo sapiens transfer RNA-Trp synthetase
           protein.
          Length = 471

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = +3

Query: 18  KSVFKVPLIIQLTDDEK 68
           + VF VPL+IQ+TDDEK
Sbjct: 184 QDVFNVPLVIQMTDDEK 200


>M61715-1|AAA61298.1|  471|Homo sapiens transfer RNA-Trp synthetase
           protein.
          Length = 471

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = +3

Query: 18  KSVFKVPLIIQLTDDEK 68
           + VF VPL+IQ+TDDEK
Sbjct: 184 QDVFNVPLVIQMTDDEK 200


>BC095453-1|AAH95453.1|  471|Homo sapiens WARS protein protein.
          Length = 471

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = +3

Query: 18  KSVFKVPLIIQLTDDEK 68
           + VF VPL+IQ+TDDEK
Sbjct: 184 QDVFNVPLVIQMTDDEK 200


>BC017489-1|AAH17489.1|  471|Homo sapiens tryptophanyl-tRNA
           synthetase protein.
          Length = 471

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = +3

Query: 18  KSVFKVPLIIQLTDDEK 68
           + VF VPL+IQ+TDDEK
Sbjct: 184 QDVFNVPLVIQMTDDEK 200


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,234,539
Number of Sequences: 237096
Number of extensions: 3205444
Number of successful extensions: 6480
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6480
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16183591620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)