Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_L07
(434 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z38112-6|CAA86235.2| 870|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z35637-7|CAA84690.2| 870|Caenorhabditis elegans Hypothetical pr... 49 2e-06
DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein. 49 2e-06
Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical pr... 28 2.5
AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical ... 28 2.5
AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical ... 28 2.5
Z50742-5|CAA90618.2| 650|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z81568-1|CAB04594.1| 681|Caenorhabditis elegans Hypothetical pr... 27 5.9
AF016445-8|AAC69052.1| 244|Caenorhabditis elegans Hypothetical ... 27 7.8
AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical... 27 7.8
AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical... 27 7.8
>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 48.8 bits (111), Expect = 2e-06
Identities = 24/69 (34%), Positives = 36/69 (52%)
Frame = +2
Query: 8 ALLQLTYHSTLLAETVNLHFXXXXXXXXXXXXTVLTKLLPLWTPIINAPNFNMPRHIAER 187
A+LQL HS +LA+ VNLHF +L +L +W PI+ A + +P + +
Sbjct: 1988 AILQLLSHSKVLADMVNLHFLNTIQALQQVNSALLCQLYSMWAPILTAYHSQIPNQLRMK 2047
Query: 188 LSVCREVQP 214
L C+ QP
Sbjct: 2048 LDSCQN-QP 2055
>Z38112-6|CAA86235.2| 870|Caenorhabditis elegans Hypothetical
protein E03A3.6b protein.
Length = 870
Score = 48.8 bits (111), Expect = 2e-06
Identities = 24/69 (34%), Positives = 36/69 (52%)
Frame = +2
Query: 8 ALLQLTYHSTLLAETVNLHFXXXXXXXXXXXXTVLTKLLPLWTPIINAPNFNMPRHIAER 187
A+LQL HS +LA+ VNLHF +L +L +W PI+ A + +P + +
Sbjct: 769 AILQLLSHSKVLADMVNLHFLNTIQALQQVNSALLCQLYSMWAPILTAYHSQIPNQLRMK 828
Query: 188 LSVCREVQP 214
L C+ QP
Sbjct: 829 LDSCQN-QP 836
>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 48.8 bits (111), Expect = 2e-06
Identities = 24/69 (34%), Positives = 36/69 (52%)
Frame = +2
Query: 8 ALLQLTYHSTLLAETVNLHFXXXXXXXXXXXXTVLTKLLPLWTPIINAPNFNMPRHIAER 187
A+LQL HS +LA+ VNLHF +L +L +W PI+ A + +P + +
Sbjct: 1988 AILQLLSHSKVLADMVNLHFLNTIQALQQVNSALLCQLYSMWAPILTAYHSQIPNQLRMK 2047
Query: 188 LSVCREVQP 214
L C+ QP
Sbjct: 2048 LDSCQN-QP 2055
>Z35637-7|CAA84690.2| 870|Caenorhabditis elegans Hypothetical
protein E03A3.6b protein.
Length = 870
Score = 48.8 bits (111), Expect = 2e-06
Identities = 24/69 (34%), Positives = 36/69 (52%)
Frame = +2
Query: 8 ALLQLTYHSTLLAETVNLHFXXXXXXXXXXXXTVLTKLLPLWTPIINAPNFNMPRHIAER 187
A+LQL HS +LA+ VNLHF +L +L +W PI+ A + +P + +
Sbjct: 769 AILQLLSHSKVLADMVNLHFLNTIQALQQVNSALLCQLYSMWAPILTAYHSQIPNQLRMK 828
Query: 188 LSVCREVQP 214
L C+ QP
Sbjct: 829 LDSCQN-QP 836
>DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.
Length = 2084
Score = 48.8 bits (111), Expect = 2e-06
Identities = 24/69 (34%), Positives = 36/69 (52%)
Frame = +2
Query: 8 ALLQLTYHSTLLAETVNLHFXXXXXXXXXXXXTVLTKLLPLWTPIINAPNFNMPRHIAER 187
A+LQL HS +LA+ VNLHF +L +L +W PI+ A + +P + +
Sbjct: 1983 AILQLLSHSKVLADMVNLHFLNTIQALQQVNSALLCQLYSMWAPILTAYHSQIPNQLRMK 2042
Query: 188 LSVCREVQP 214
L C+ QP
Sbjct: 2043 LDSCQN-QP 2050
>Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical
protein F14F4.3b protein.
Length = 1427
Score = 28.3 bits (60), Expect = 2.5
Identities = 11/47 (23%), Positives = 26/47 (55%)
Frame = -2
Query: 169 RHIEIGRVYYRSPERQQLREYSRVTLQEGFQEVQEVKVDSFRQQGRV 29
R++ I + R ++ +Y R+ G++++ K+D FR++ +V
Sbjct: 317 RNLAIVKTEKRISMMAEIIKYIRIVKMNGWEQIFSAKIDQFRKEEKV 363
>Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical
protein F14F4.3a protein.
Length = 1400
Score = 28.3 bits (60), Expect = 2.5
Identities = 11/47 (23%), Positives = 26/47 (55%)
Frame = -2
Query: 169 RHIEIGRVYYRSPERQQLREYSRVTLQEGFQEVQEVKVDSFRQQGRV 29
R++ I + R ++ +Y R+ G++++ K+D FR++ +V
Sbjct: 317 RNLAIVKTEKRISMMAEIIKYIRIVKMNGWEQIFSAKIDQFRKEEKV 363
>AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical
protein F14F4.3b protein.
Length = 1427
Score = 28.3 bits (60), Expect = 2.5
Identities = 11/47 (23%), Positives = 26/47 (55%)
Frame = -2
Query: 169 RHIEIGRVYYRSPERQQLREYSRVTLQEGFQEVQEVKVDSFRQQGRV 29
R++ I + R ++ +Y R+ G++++ K+D FR++ +V
Sbjct: 317 RNLAIVKTEKRISMMAEIIKYIRIVKMNGWEQIFSAKIDQFRKEEKV 363
>AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical
protein F14F4.3a protein.
Length = 1400
Score = 28.3 bits (60), Expect = 2.5
Identities = 11/47 (23%), Positives = 26/47 (55%)
Frame = -2
Query: 169 RHIEIGRVYYRSPERQQLREYSRVTLQEGFQEVQEVKVDSFRQQGRV 29
R++ I + R ++ +Y R+ G++++ K+D FR++ +V
Sbjct: 317 RNLAIVKTEKRISMMAEIIKYIRIVKMNGWEQIFSAKIDQFRKEEKV 363
>Z50742-5|CAA90618.2| 650|Caenorhabditis elegans Hypothetical
protein K09A11.5 protein.
Length = 650
Score = 27.5 bits (58), Expect = 4.4
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Frame = +2
Query: 110 LTKLLPLWTPIINAPNFNMPRHIAE-RLSVCREVQPEPVHGITAGACGTTTPGSGAAPSG 286
L++L P+ T I + I + L C V+ EP+ T+ A + S +APS
Sbjct: 158 LSRLNPMNTNGIELDEYTKTLKIPKVLLGTCPNVKLEPLEDATSSATSGRSAASPSAPSK 217
Query: 287 ACDAREQ----RRLHRLLAKMAQLE 349
+ RR+ R AK +LE
Sbjct: 218 KIKKTQNIEGTRRITRAEAKRLELE 242
>Z81568-1|CAB04594.1| 681|Caenorhabditis elegans Hypothetical
protein K08E3.1 protein.
Length = 681
Score = 27.1 bits (57), Expect = 5.9
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 424 ILTTVID*YKMLCV*LYEIEGVRLQLKLGHLGQQPVKATLLPRV 293
ILTT++ +LCV L + GV+ K G +G V+ T + +V
Sbjct: 6 ILTTLL----LLCVVLISVAGVKSTTKKGAVGGTAVRKTTVKKV 45
>AF016445-8|AAC69052.1| 244|Caenorhabditis elegans Hypothetical
protein T05B4.12 protein.
Length = 244
Score = 26.6 bits (56), Expect = 7.8
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 233 TAGACGTTTPGSGAAPSGAC 292
T G C +TT SG+ SG C
Sbjct: 184 TCGRCPSTTASSGSVTSGTC 203
>AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18b protein.
Length = 586
Score = 26.6 bits (56), Expect = 7.8
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = -3
Query: 288 APLGAAPLPGVVVPHAPAVMP-CTGSGCTSRQT 193
AP AAP P AP VMP CT R T
Sbjct: 284 APAPAAPQQASAAPAAPNVMPVCTEIAAEQRHT 316
>AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18a protein.
Length = 946
Score = 26.6 bits (56), Expect = 7.8
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = -3
Query: 288 APLGAAPLPGVVVPHAPAVMP-CTGSGCTSRQT 193
AP AAP P AP VMP CT R T
Sbjct: 644 APAPAAPQQASAAPAAPNVMPVCTEIAAEQRHT 676
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,317,078
Number of Sequences: 27780
Number of extensions: 138290
Number of successful extensions: 466
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 466
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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