Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_L07
         (434 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    26   0.21 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.37 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   4.5  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   6.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   6.0  

>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 25.8 bits (54), Expect = 0.21
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -2

Query: 139 RSPERQQLREYSRVTLQEGFQEVQEVKVDSFRQQGRVVG 23
           R  ER+Q     RVT Q+  Q+ Q+ + D  +QQ   +G
Sbjct: 73  REREREQREHSDRVTSQQQQQQQQQQQQDQQQQQQSRMG 111


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 25.0 bits (52), Expect = 0.37
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 233 TAGACGTTTPGSGAAPSGACDA 298
           TA    T+TPGSG+ P+   D+
Sbjct: 227 TATMATTSTPGSGSLPASPADS 248


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 125 PLWTPIINAPNFNMP 169
           PL+  + +APNF MP
Sbjct: 947 PLYVFVRSAPNFYMP 961


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 267 LPGVVVPHAPAVMPCTGSG 211
           L  VV+PH  AV   TG+G
Sbjct: 169 LKQVVMPHDIAVNASTGNG 187


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -2

Query: 133  PERQQLREYSRVTLQEGFQEVQEVKVDSFR 44
            P+R + R Y R +L E  + VQ  ++   R
Sbjct: 1035 PKRGKYRNYDRDSLVEAVRAVQRGEMSVHR 1064


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,328
Number of Sequences: 438
Number of extensions: 1747
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)