Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_L06
         (501 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    25   1.9  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   3.3  
AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    23   5.8  

>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 87  WEIELRPVIRSKLYIPYDLT 28
           W+ +L+P +  KLY P D++
Sbjct: 95  WQADLKPELSPKLYQPTDVS 114


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 417 KNDPVVKETKKNDNNITKV 473
           +ND +  E KK +N ITKV
Sbjct: 900 QNDELKLEIKKKENEITKV 918


>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 10/52 (19%), Positives = 27/52 (51%)
 Frame = +3

Query: 180 HKKKSLDTQQKSEEFQSTKLKCLDKSYVHSTIVNNSIKDISEMSSNEASTKS 335
           H +    T +   E Q+  + CL ++Y+H ++ + + K +++    E ++ +
Sbjct: 195 HSRLRTATLRNDFEGQAVLINCLLRNYLHYSLYDQADKLVNKSVFPETASNN 246


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 286,362
Number of Sequences: 2352
Number of extensions: 3320
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44823054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)