Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_L06
         (501 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB046817-1|BAB13423.1|  913|Homo sapiens KIAA1597 protein protein.     35   0.14 
AY386362-1|AAR25619.1| 1780|Homo sapiens breast cancer-associate...    30   3.9  
AK131365-1|BAD18516.1|  579|Homo sapiens   protein.                    30   3.9  
AK127504-1|BAC87010.1|  862|Homo sapiens protein ( Homo sapiens ...    30   3.9  
AK124754-1|BAC85937.1|  893|Homo sapiens protein ( Homo sapiens ...    30   3.9  

>AB046817-1|BAB13423.1|  913|Homo sapiens KIAA1597 protein protein.
          Length = 913

 Score = 35.1 bits (77), Expect = 0.14
 Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
 Frame = +3

Query: 192 SLDTQQKSEEFQSTKLKCLDKSYVHSTIVNNSIKDISEMSSNEASTKSR-EEVIAMRE 362
           S D QQ SEE  S  LK L++S     + + S++DIS  SSN+A   ++ EE++   E
Sbjct: 484 SRDRQQGSEEEPSPVLKTLERSAARK-MPSKSLEDISSDSSNQAKVDNQPEELVRSAE 540


>AY386362-1|AAR25619.1| 1780|Homo sapiens breast cancer-associated
            antigen SGA-72M protein.
          Length = 1780

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +3

Query: 174  TEHKKKSLDTQQKSEEFQSTKLKCLDKSYVHSTIVNNSIKDISEMSSNEASTKSR-EEVI 350
            T    +S      SEE  S  LK L++S     + + S++DIS  SSN+A   ++ EE++
Sbjct: 1321 TSSNAESWRNPSSSEEEPSPVLKTLERSAARK-MPSKSLEDISSDSSNQAKVDNQPEELV 1379

Query: 351  AMRE 362
               E
Sbjct: 1380 RSAE 1383


>AK131365-1|BAD18516.1|  579|Homo sapiens   protein.
          Length = 579

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +3

Query: 174 TEHKKKSLDTQQKSEEFQSTKLKCLDKSYVHSTIVNNSIKDISEMSSNEASTKSR-EEVI 350
           T    +S      SEE  S  LK L++S     + + S++DIS  SSN+A   ++ EE++
Sbjct: 144 TSSNAESWRNPSSSEEEPSPVLKTLERSAARK-MPSKSLEDISSDSSNQAKVDNQPEELV 202

Query: 351 AMRE 362
              E
Sbjct: 203 RSAE 206


>AK127504-1|BAC87010.1|  862|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45597 fis, clone BRTHA3018409, weakly  similar
           to Mus musculus synaptotagmin-like 4 (Sytl4). ).
          Length = 862

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +3

Query: 174 TEHKKKSLDTQQKSEEFQSTKLKCLDKSYVHSTIVNNSIKDISEMSSNEASTKSR-EEVI 350
           T    +S      SEE  S  LK L++S     + + S++DIS  SSN+A   ++ EE++
Sbjct: 797 TSSNAESWRNPSSSEEEPSPVLKTLERSAARK-MPSKSLEDISSDSSNQAKVDNQPEELV 855

Query: 351 AMRE 362
              E
Sbjct: 856 RSAE 859


>AK124754-1|BAC85937.1|  893|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42764 fis, clone BRAWH3002821, moderately
           similar to Mus musculus synaptotagmin-like 2 (Sytl2). ).
          Length = 893

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +3

Query: 174 TEHKKKSLDTQQKSEEFQSTKLKCLDKSYVHSTIVNNSIKDISEMSSNEASTKSR-EEVI 350
           T    +S      SEE  S  LK L++S     + + S++DIS  SSN+A   ++ EE++
Sbjct: 434 TSSNAESWRNPSSSEEEPSPVLKTLERSAARK-MPSKSLEDISSDSSNQAKVDNQPEELV 492

Query: 351 AMRE 362
              E
Sbjct: 493 RSAE 496


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,892,617
Number of Sequences: 237096
Number of extensions: 478793
Number of successful extensions: 1134
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1134
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)