Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_L04
(722 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a pr... 87 6e-17
BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a ... 87 6e-17
BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a ... 87 6e-17
BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a ... 87 6e-17
AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein L18a-... 87 6e-17
AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a ... 87 6e-17
AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a ... 87 6e-17
X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA ... 54 7e-07
AY148462-1|AAN16075.1| 177|Homo sapiens lung cancer metastasis-... 36 0.11
AL713794-1|CAD28548.1| 548|Homo sapiens hypothetical protein pr... 31 4.2
AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-1... 31 4.2
BC041656-1|AAH41656.2| 506|Homo sapiens BCDO2 protein protein. 31 5.5
AK027801-1|BAB55379.1| 539|Homo sapiens protein ( Homo sapiens ... 31 5.5
AJ290393-1|CAC27994.1| 556|Homo sapiens putative b,b-carotene-9... 31 5.5
AF276432-1|AAK69433.1| 545|Homo sapiens putative carotene dioxy... 31 5.5
AY101765-1|AAM50084.1| 1885|Homo sapiens C3 and PZP-like alpha-2... 30 7.3
AK075099-1|BAC11400.1| 327|Homo sapiens protein ( Homo sapiens ... 30 7.3
AF226732-1|AAG09733.1| 434|Homo sapiens NPD007 protein. 30 7.3
AB033109-1|BAA86597.1| 1884|Homo sapiens KIAA1283 protein protein. 30 7.3
BC030221-1|AAH30221.1| 1075|Homo sapiens ABI gene family, member... 30 9.6
>L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 87.0 bits (206), Expect = 6e-17
Identities = 38/60 (63%), Positives = 49/60 (81%)
Frame = +1
Query: 10 AKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIV 189
A G L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 3 ASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIV 62
Score = 56.0 bits (129), Expect = 1e-07
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +2
Query: 248 FGIWLRYESRSGVHNMYREYRDLSVGG 328
FGIWLRY+SRSG HNMYREYRDL+ G
Sbjct: 78 FGIWLRYDSRSGTHNMYREYRDLTTAG 104
>BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 87.0 bits (206), Expect = 6e-17
Identities = 38/60 (63%), Positives = 49/60 (81%)
Frame = +1
Query: 10 AKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIV 189
A G L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 3 ASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIV 62
Score = 56.0 bits (129), Expect = 1e-07
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +2
Query: 248 FGIWLRYESRSGVHNMYREYRDLSVGG 328
FGIWLRY+SRSG HNMYREYRDL+ G
Sbjct: 78 FGIWLRYDSRSGTHNMYREYRDLTTAG 104
>BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 87.0 bits (206), Expect = 6e-17
Identities = 38/60 (63%), Positives = 49/60 (81%)
Frame = +1
Query: 10 AKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIV 189
A G L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 3 ASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIV 62
Score = 56.0 bits (129), Expect = 1e-07
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +2
Query: 248 FGIWLRYESRSGVHNMYREYRDLSVGG 328
FGIWLRY+SRSG HNMYREYRDL+ G
Sbjct: 78 FGIWLRYDSRSGTHNMYREYRDLTTAG 104
>BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 87.0 bits (206), Expect = 6e-17
Identities = 38/60 (63%), Positives = 49/60 (81%)
Frame = +1
Query: 10 AKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIV 189
A G L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 3 ASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIV 62
Score = 56.0 bits (129), Expect = 1e-07
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +2
Query: 248 FGIWLRYESRSGVHNMYREYRDLSVGG 328
FGIWLRY+SRSG HNMYREYRDL+ G
Sbjct: 78 FGIWLRYDSRSGTHNMYREYRDLTTAG 104
>AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein
L18a-like protein protein.
Length = 136
Score = 87.0 bits (206), Expect = 6e-17
Identities = 37/60 (61%), Positives = 49/60 (81%)
Frame = +1
Query: 10 AKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIV 189
A G L+EY+V+GR+LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE V
Sbjct: 3 ASGTLREYKVVGRRLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGETV 62
Score = 52.4 bits (120), Expect = 2e-06
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +2
Query: 248 FGIWLRYESRSGVHNMYREYRDLSVGG 328
FGIWLR +SRSG HNMYREYRDL+ G
Sbjct: 78 FGIWLRCDSRSGTHNMYREYRDLTTAG 104
>AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a
variant protein.
Length = 176
Score = 87.0 bits (206), Expect = 6e-17
Identities = 38/60 (63%), Positives = 49/60 (81%)
Frame = +1
Query: 10 AKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIV 189
A G L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 3 ASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIV 62
Score = 56.0 bits (129), Expect = 1e-07
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +2
Query: 248 FGIWLRYESRSGVHNMYREYRDLSVGG 328
FGIWLRY+SRSG HNMYREYRDL+ G
Sbjct: 78 FGIWLRYDSRSGTHNMYREYRDLTAAG 104
>AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 87.0 bits (206), Expect = 6e-17
Identities = 38/60 (63%), Positives = 49/60 (81%)
Frame = +1
Query: 10 AKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIV 189
A G L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 3 ASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIV 62
Score = 56.0 bits (129), Expect = 1e-07
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +2
Query: 248 FGIWLRYESRSGVHNMYREYRDLSVGG 328
FGIWLRY+SRSG HNMYREYRDL+ G
Sbjct: 78 FGIWLRYDSRSGTHNMYREYRDLTTAG 104
>X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA for
ORF. ).
Length = 140
Score = 53.6 bits (123), Expect = 7e-07
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +2
Query: 248 FGIWLRYESRSGVHNMYREYRDLSVGG 328
FGIWL Y+SRSG HNMYREYRDL+ G
Sbjct: 42 FGIWLSYDSRSGTHNMYREYRDLTTAG 68
>AY148462-1|AAN16075.1| 177|Homo sapiens lung cancer
metastasis-related protein protein.
Length = 177
Score = 36.3 bits (80), Expect = 0.11
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +2
Query: 365 LDTGALCTISNYQEVQVPKKRVGHKFKFQRAQARGPIWFPGSGNPTKRVYKAKSFPNKPK 544
L TG L +Q PKK+ HK K R Q P P +P K+ K + P++ +
Sbjct: 87 LHTGPLPEQCRLMHIQPPKKKNKHKHKQSRTQDPVPPETPSDSDPKKKKKKKEEDPDRKR 146
Query: 545 AKR 553
K+
Sbjct: 147 KKK 149
>AL713794-1|CAD28548.1| 548|Homo sapiens hypothetical protein
protein.
Length = 548
Score = 31.1 bits (67), Expect = 4.2
Identities = 22/57 (38%), Positives = 28/57 (49%)
Frame = +1
Query: 337 LPWVLKFWELRHRSSVHHFQLPRSPSSQKKGWAQV*IPTRPSPWPNLVPRFRKPNQA 507
L V K L+HR+ HF LP Q+ AQ+ T S W NLV + R+ QA
Sbjct: 346 LQQVSKLASLQHRAK-DHFYLPSVREVQEYIPAQLYRTTAGSTWLNLVSQHRQQTQA 401
>AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-15
protein.
Length = 3530
Score = 31.1 bits (67), Expect = 4.2
Identities = 22/57 (38%), Positives = 28/57 (49%)
Frame = +1
Query: 337 LPWVLKFWELRHRSSVHHFQLPRSPSSQKKGWAQV*IPTRPSPWPNLVPRFRKPNQA 507
L V K L+HR+ HF LP Q+ AQ+ T S W NLV + R+ QA
Sbjct: 3339 LQQVSKLASLQHRAK-DHFYLPSVREVQEYIPAQLYRTTAGSTWLNLVSQHRQQTQA 3394
>BC041656-1|AAH41656.2| 506|Homo sapiens BCDO2 protein protein.
Length = 506
Score = 30.7 bits (66), Expect = 5.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 377 LLCLSSQNFKTHGREGTPLHSSHGIHGTY 291
LL L ++NF+ GR P+ +G HGT+
Sbjct: 475 LLVLDAKNFEELGRAEVPVQMPYGFHGTF 503
>AK027801-1|BAB55379.1| 539|Homo sapiens protein ( Homo sapiens
cDNA FLJ14895 fis, clone PLACE1004646, weakly similar to
B.taurus mRNA for retinal pigment epithelial membrane
receptor ).
Length = 539
Score = 30.7 bits (66), Expect = 5.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 377 LLCLSSQNFKTHGREGTPLHSSHGIHGTY 291
LL L ++NF+ GR P+ +G HGT+
Sbjct: 508 LLVLDAKNFEELGRAEVPVQMPYGFHGTF 536
>AJ290393-1|CAC27994.1| 556|Homo sapiens putative
b,b-carotene-9',10'-dioxygenase protein.
Length = 556
Score = 30.7 bits (66), Expect = 5.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 377 LLCLSSQNFKTHGREGTPLHSSHGIHGTY 291
LL L ++NF+ GR P+ +G HGT+
Sbjct: 525 LLVLDAKNFEELGRAEVPVQMPYGFHGTF 553
>AF276432-1|AAK69433.1| 545|Homo sapiens putative carotene
dioxygenase protein.
Length = 545
Score = 30.7 bits (66), Expect = 5.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 377 LLCLSSQNFKTHGREGTPLHSSHGIHGTY 291
LL L ++NF+ GR P+ +G HGT+
Sbjct: 514 LLVLDAKNFEELGRAEVPVQMPYGFHGTF 542
>AY101765-1|AAM50084.1| 1885|Homo sapiens C3 and PZP-like
alpha-2-macroglobulin domain containing 8 protein.
Length = 1885
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 449 QRAQARGPIWFPGSGNP 499
+RA ARGP WFPG P
Sbjct: 1681 ERAPARGPGWFPGESGP 1697
>AK075099-1|BAC11400.1| 327|Homo sapiens protein ( Homo sapiens
cDNA FLJ90618 fis, clone PLACE1002355, weakly similar to
COMPLEMENT C4 PRECURSOR. ).
Length = 327
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 449 QRAQARGPIWFPGSGNP 499
+RA ARGP WFPG P
Sbjct: 193 ERAPARGPGWFPGESGP 209
>AF226732-1|AAG09733.1| 434|Homo sapiens NPD007 protein.
Length = 434
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 477 GSPVPETQPSAFIKPKV-FPTNPKPK 551
GSP PET+P A++ P P +P PK
Sbjct: 285 GSPEPETEPGAWLLPHTELPPSPVPK 310
>AB033109-1|BAA86597.1| 1884|Homo sapiens KIAA1283 protein protein.
Length = 1884
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 449 QRAQARGPIWFPGSGNP 499
+RA ARGP WFPG P
Sbjct: 1680 ERAPARGPGWFPGESGP 1696
>BC030221-1|AAH30221.1| 1075|Homo sapiens ABI gene family, member 3
(NESH) binding protein protein.
Length = 1075
Score = 29.9 bits (64), Expect = 9.6
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Frame = +3
Query: 393 PITKKSKFPKKGLGTSLNSNAPKPVAQFGSPVP-ETQ-----PSAFIKPKVFPTNPKPKE 554
P TK + G T S +P+P + +P P +TQ P + P+V T P PK+
Sbjct: 479 PRTKPERTTSAGTITPKISKSPEPT--WTTPAPGKTQFISLKPKIPLSPEVTHTKPAPKQ 536
Query: 555 IPRXXRWPDPK 587
PR P PK
Sbjct: 537 TPRAP--PKPK 545
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,948,547
Number of Sequences: 237096
Number of extensions: 2750498
Number of successful extensions: 14423
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 13750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14389
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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