Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_L04
         (722 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    25   0.96 
AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin prot...    25   0.96 
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    25   0.96 
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    25   0.96 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   2.2  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   2.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   2.2  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   5.1  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   6.7  

>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = -1

Query: 530 ENFWLYKRAWLGFRN-RGTK 474
           ENF ++KRA +GF+  RG K
Sbjct: 49  ENFGIFKRALMGFQGVRGKK 68


>AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin
           protein.
          Length = 124

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = -1

Query: 530 ENFWLYKRAWLGFRN-RGTK 474
           ENF ++KRA +GF+  RG K
Sbjct: 50  ENFGIFKRALMGFQGVRGKK 69


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = -1

Query: 530 ENFWLYKRAWLGFRN-RGTK 474
           ENF ++KRA +GF+  RG K
Sbjct: 49  ENFGIFKRALMGFQGVRGKK 68


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = -1

Query: 530 ENFWLYKRAWLGFRN-RGTK 474
           ENF ++KRA +GF+  RG K
Sbjct: 49  ENFGIFKRALMGFQGVRGKK 68


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -1

Query: 506 AWLGFRNRGTKLGHG 462
           A LGFR  G KL HG
Sbjct: 410 ATLGFRVEGIKLAHG 424


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -1

Query: 506 AWLGFRNRGTKLGHG 462
           A LGFR  G KL HG
Sbjct: 325 ATLGFRVEGIKLAHG 339


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -1

Query: 506 AWLGFRNRGTKLGHG 462
           A LGFR  G KL HG
Sbjct: 644 ATLGFRVEGIKLAHG 658


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 340 PWVLKFWELRHRSSVHHFQ 396
           PW ++FWE       HHFQ
Sbjct: 424 PWFVEFWE-------HHFQ 435


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 329 TPLHSSHGIHGTY 291
           T LH  HG+HG +
Sbjct: 132 TGLHGLHGLHGLH 144


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,473
Number of Sequences: 438
Number of extensions: 5136
Number of successful extensions: 28
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)