Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_L02
         (465 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1561|AAF52709.1|  942|Drosophila melanogaster CG9465-PA...    30   1.8  
M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chai...    28   5.4  
M75882-1|AAA28661.1| 1951|Drosophila melanogaster laminin A chai...    28   5.4  
L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A prot...    28   5.4  
AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-P...    28   5.4  

>AE014134-1561|AAF52709.1|  942|Drosophila melanogaster CG9465-PA
           protein.
          Length = 942

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 17/60 (28%), Positives = 31/60 (51%)
 Frame = +2

Query: 17  DYEVYDPKGNKLPSNLAEIPDFLKHIPTRKSFATHILYFLTELSPLSMTSFYVKKHAKSD 196
           +Y+V D KG  +PS +  +P  +  +  R +   H L F   ++ +S  S+ +KK   S+
Sbjct: 469 NYQVTDEKGRTVPSEVVPVPWQVLALEYRSNDTQHELVFKATVNKVS--SYSIKKVESSE 526


>M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chain
            protein.
          Length = 3712

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +2

Query: 254  KVIQDSGLVDIDNLEEANNVNEKFGNIEQKVNDINKYQVN 373
            K I+D+G   I+     N +N+K  N+   +N++N +  N
Sbjct: 2363 KNIKDAGNFLINGDLTLNQINQKLDNLRDALNELNSFNKN 2402


>M75882-1|AAA28661.1| 1951|Drosophila melanogaster laminin A chain
           protein.
          Length = 1951

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +2

Query: 254 KVIQDSGLVDIDNLEEANNVNEKFGNIEQKVNDINKYQVN 373
           K I+D+G   I+     N +N+K  N+   +N++N +  N
Sbjct: 602 KNIKDAGNFLINGDLTLNQINQKLDNLRDALNELNSFNKN 641


>L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A protein.
          Length = 3712

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +2

Query: 254  KVIQDSGLVDIDNLEEANNVNEKFGNIEQKVNDINKYQVN 373
            K I+D+G   I+     N +N+K  N+   +N++N +  N
Sbjct: 2363 KNIKDAGNFLINGDLTLNQINQKLDNLRDALNELNSFNKN 2402


>AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-PA
            protein.
          Length = 3712

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +2

Query: 254  KVIQDSGLVDIDNLEEANNVNEKFGNIEQKVNDINKYQVN 373
            K I+D+G   I+     N +N+K  N+   +N++N +  N
Sbjct: 2363 KNIKDAGNFLINGDLTLNQINQKLDNLRDALNELNSFNKN 2402


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,685,455
Number of Sequences: 53049
Number of extensions: 254673
Number of successful extensions: 626
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1559812275
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)