Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_L02
         (465 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          24   0.70 
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      24   0.70 
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   2.1  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    22   3.7  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   3.7  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   4.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   4.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   4.9  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 24.2 bits (50), Expect = 0.70
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 130 IQYMCGKRFPRRNMFEKIRYF 68
           I Y  G  FP+RN F  + Y+
Sbjct: 301 IMYSNGVTFPQRNRFSSLPYY 321


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 24.2 bits (50), Expect = 0.70
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 130 IQYMCGKRFPRRNMFEKIRYF 68
           I Y  G  FP+RN F  + Y+
Sbjct: 301 IMYSNGVTFPQRNRFSSLPYY 321


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 41  GNKLPSNLAEIPDFLK 88
           G+KLP N+  IPD ++
Sbjct: 67  GHKLPPNIIAIPDVVE 82


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = -3

Query: 430 PFPASSTFFISNEFLFVYRINLIFVYI 350
           P+P +  FF+   F F++   + F  +
Sbjct: 271 PYPTALDFFVFLSFAFIFATIIQFAVV 297


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +2

Query: 290 NLEEANNVNEKFGNIEQKVNDINK-YQVNTINK 385
           N+EE+NN+ + F  I    N I + Y +N + K
Sbjct: 566 NIEESNNMTDSFTRIAN--NTIQELYTLNNMYK 596


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 5   EVKADYEVYDPKGNKLP 55
           E  ADY  + P G+K+P
Sbjct: 277 ENPADYRYFCPDGSKVP 293


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 5   EVKADYEVYDPKGNKLP 55
           E  ADY  + P G+K+P
Sbjct: 277 ENPADYRYFCPDGSKVP 293


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 5   EVKADYEVYDPKGNKLP 55
           E  ADY  + P G+K+P
Sbjct: 277 ENPADYRYFCPDGSKVP 293


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,319
Number of Sequences: 438
Number of extensions: 1973
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12436029
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)