Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_K21
(438 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6F6.13c |||DUF726 family protein|Schizosaccharomyces pombe|c... 32 0.034
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 30 0.14
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 30 0.18
SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr ... 29 0.31
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 28 0.72
SPCC970.07c |raf2|dos2, cmc2, clr7|Rik1-associated factor Raf2|S... 27 0.96
SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase |S... 26 2.2
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 26 2.2
SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr... 26 2.2
SPAC4F10.03c |||2'-O-ribose methyltransferase|Schizosaccharomyce... 26 2.9
SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 25 3.9
SPCC188.06c |srp54||signal recognition particle subunit Srp54|Sc... 25 5.1
SPAC14C4.11 |||polyphosphate synthetase |Schizosaccharomyces pom... 25 5.1
SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex ... 25 5.1
SPAC1952.13 |ned1||lipin|Schizosaccharomyces pombe|chr 1|||Manual 25 6.7
SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr 2|||Ma... 25 6.7
SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyce... 25 6.7
SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatas... 24 8.9
SPAC3F10.17 |||ribosome biogenesis protein Ltv1|Schizosaccharomy... 24 8.9
SPCC965.11c |||amino acid transporter |Schizosaccharomyces pombe... 24 8.9
SPAC1B3.09c |||Noc2p-Noc3p complex subunit Noc2 family |Schizosa... 24 8.9
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 24 8.9
SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase |Schizosa... 24 8.9
>SPAC6F6.13c |||DUF726 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 778
Score = 32.3 bits (70), Expect = 0.034
Identities = 22/74 (29%), Positives = 39/74 (52%)
Frame = +1
Query: 118 QALEMLKLKEDHINIQFDETNKIIEDIKETTPIVYEKHEINENKHDWFDVTEDGAACVEI 297
Q +E++ L+ H+ D+ N+IIE+ KET + E+ E+ E ++ ED ++
Sbjct: 62 QPMEVISLEPTHLINDIDDDNEIIEEKKETEKV--EESEL-EPRYTRVFRDEDDDQKHQL 118
Query: 298 IQDKIEELSIVDSG 339
+ I+ L I D G
Sbjct: 119 DSEAIKLLDIADHG 132
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 30.3 bits (65), Expect = 0.14
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Frame = +1
Query: 40 ILKRERKEIETQILAEIDTTEIVFLE--QAL--EMLKLKEDHINIQFDETNKIIEDIKET 207
+L R+R+++ Q AEI+ E + E +AL +LK+KE+ I TN + +
Sbjct: 700 LLLRQREKVPEQFAAEIEKNEDIRKENFEALMNSVLKVKENSIK----ATNNFEKMLGSR 755
Query: 208 TPIVYEKHEINENKHDWFDVTEDGAACVEIIQDKIEELSIVDSGLNPEAAEFSLCGDV 381
++ K+++ KH+ D + A E +QD++++ I D + SL G V
Sbjct: 756 LNVIEAKYKL--EKHE-MDANQVNARLTE-VQDRLKD--ITDKLASAREDAMSLYGSV 807
Score = 29.1 bits (62), Expect = 0.31
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Frame = +1
Query: 52 ERKEIETQILAEIDTTEIVFLEQALEMLKLKEDHINI----QFDETNKIIEDIK----ET 207
+R+ T++ E T+ V + ++E KLK ++N Q+D K IE+++ +
Sbjct: 817 DRQTAITELNEEFATSSEVDNKISIEETKLKFMNVNSYVMEQYDARKKEIEELESKMSDF 876
Query: 208 TPIVYE-KHEINENKHDWFDVTEDGAACV 291
V E + E+N K DW E+ C+
Sbjct: 877 DQSVEELQDEMNSIKEDWVSKLEENVQCI 905
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 29.9 bits (64), Expect = 0.18
Identities = 22/111 (19%), Positives = 55/111 (49%)
Frame = +1
Query: 61 EIETQILAEIDTTEIVFLEQALEMLKLKEDHINIQFDETNKIIEDIKETTPIVYEKHEIN 240
++E ++ T I FLE ALE ++ ++D ++ + +E K + YE +EI
Sbjct: 237 DVEQSQNVKVFTERIRFLENALEKVQREKDSLSTEMEED-------KSNKEVDYE-YEIR 288
Query: 241 ENKHDWFDVTEDGAACVEIIQDKIEELSIVDSGLNPEAAEFSLCGDVDNQS 393
+ ++ +++E+ +++ +K +E++ + + + S + +N S
Sbjct: 289 QLQNRLDELSEELDVAQDLLTEKEDEIATLKRQIEEKENSSSAFENEENSS 339
>SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1854
Score = 29.1 bits (62), Expect = 0.31
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +1
Query: 175 TNKIIEDIKETTPIVYEKHEINENKHDWFDVTEDGAACVEIIQDKIE 315
T IIE I TPI H +N+ +H WF TE A + I+ I+
Sbjct: 954 TAVIIECI--ATPIYERDHLLNDKQHAWFVWTEVAFATIFTIEAAIK 998
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 27.9 bits (59), Expect = 0.72
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +1
Query: 151 HINIQFDETNKIIEDIKETTPIVYEKHEINENKHDWFDVTEDGAACVEIIQDKIEELSIV 330
+IN++ + + E+ KE ++Y+ + DV EI+Q +EELS++
Sbjct: 167 YINLE-NANPSVREEAKEVLLLIYKNLSTSAKMQFITDVETTSGLRREILQSLVEELSLI 225
Query: 331 DS 336
S
Sbjct: 226 SS 227
>SPCC970.07c |raf2|dos2, cmc2, clr7|Rik1-associated factor
Raf2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 27.5 bits (58), Expect = 0.96
Identities = 16/75 (21%), Positives = 37/75 (49%)
Frame = +1
Query: 13 EANKQQVHDILKRERKEIETQILAEIDTTEIVFLEQALEMLKLKEDHINIQFDETNKIIE 192
+ NK + +R++ ++ + ++ +TT L QAL ++ L E +I +
Sbjct: 200 QINKNIYNARQERKKSKLSSNNPSDNNTTMKSSLNQALTLINLPEQPFSISSPTATPQLG 259
Query: 193 DIKETTPIVYEKHEI 237
+K T+P+ + ++I
Sbjct: 260 VVKRTSPLRFPLNDI 274
>SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 26.2 bits (55), Expect = 2.2
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 298 IQDKIEELSIVDSGLNPEAAEFSLCGDVDNQSGEVY--VPEPITSVD 432
+Q ++ E S + L E A F +CGD D+ + +V + +T+VD
Sbjct: 611 VQHRLLEHSDTIAKLVEEGAAFYICGDADHMAKDVVNALASILTTVD 657
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 26.2 bits (55), Expect = 2.2
Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Frame = +1
Query: 4 RGFEANKQQVHDILKRER----KEIETQILAEIDTTE--IVFLEQALEMLKLKEDHI 156
R E + +H L +R + + Q+ + I+ ++ I++LE+ LE LKL+++ +
Sbjct: 13 RKIERERSVIHGALSMKRLTQNQTVHQQLHSNIEESKKSIIYLEERLEKLKLRKNGV 69
>SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1471
Score = 26.2 bits (55), Expect = 2.2
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 223 EKHEINENKHDWFDVT-EDGAACVEIIQDKIEELSIVDSGLN-PEAAEFSLCGDVDNQ 390
E+ E + DW + D C+ +I+DK+ LS++D P S ++NQ
Sbjct: 475 EQEEYVKEGLDWRLIEYSDNQGCISLIEDKLGILSLLDEECRLPSGNHQSFLQKLNNQ 532
>SPAC4F10.03c |||2'-O-ribose methyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 285
Score = 25.8 bits (54), Expect = 2.9
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +1
Query: 259 FDVTEDGAACVEIIQDKIEELSIVDSGLNPEAAEFSLCGDVDNQSGEVYVPEPI 420
F V ED D + L ++D E A F CGD+D + P I
Sbjct: 201 FVVCEDFNPPSNFQPDLTKPLCVIDPTNAHEIAPFIACGDLDGYDADATYPVEI 254
>SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 486
Score = 25.4 bits (53), Expect = 3.9
Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 19 NKQQVHDILKRERKE-IETQILAEIDTTEIVFLEQALEMLKLKED 150
N ++ H ++ E K+ I ++++ I TTE +Q+L L+LKE+
Sbjct: 64 NHKKPHYSVETEVKDVIISKVVELIKTTEFQISQQSLVPLELKEE 108
>SPCC188.06c |srp54||signal recognition particle subunit
Srp54|Schizosaccharomyces pombe|chr 3|||Manual
Length = 522
Score = 25.0 bits (52), Expect = 5.1
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 202 ETTPIVYEKHEINENKHDWFDV-TEDGAACVEIIQDKIEELSIVDSGLNPE 351
ET P+V K +++ K+D FDV D + + Q+ E+ + + P+
Sbjct: 165 ETDPVVIAKEGVDKFKNDRFDVIIVDTSGRHQQEQELFAEMVEISDAIRPD 215
>SPAC14C4.11 |||polyphosphate synthetase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 734
Score = 25.0 bits (52), Expect = 5.1
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +1
Query: 136 KLKEDHINIQFDETNKIIEDIKE 204
K+++DH D+ K+IED+++
Sbjct: 328 KVEDDHSTTASDQKKKLIEDVEQ 350
>SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex
subunit |Schizosaccharomyces pombe|chr 2|||Manual
Length = 509
Score = 25.0 bits (52), Expect = 5.1
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 169 DETNKIIEDIKETTPIVYEKHEI 237
+E K+ IKE T IV++KH++
Sbjct: 483 EEIEKLALLIKEKTEIVFDKHKV 505
>SPAC1952.13 |ned1||lipin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 656
Score = 24.6 bits (51), Expect = 6.7
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +1
Query: 124 LEMLKLKEDHINIQFDETNKIIEDIKETTPIVYEKHEINENKHDWFDVTEDGAACVEI 297
L+M K NI E + E K+ P++ + +E + WF +ED E+
Sbjct: 227 LDMTGYKSSAANINIAELAR--ETFKDEFPMIEKLLREDEEGNLWFHASEDAKKFAEV 282
>SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 614
Score = 24.6 bits (51), Expect = 6.7
Identities = 23/123 (18%), Positives = 52/123 (42%), Gaps = 18/123 (14%)
Frame = +1
Query: 4 RGFEANKQQVHDILKRERKEIETQILAEIDTTEIV----FLEQALEMLKLKEDHINIQFD 171
+ FE +K+ +D ++ +E+ ++ + V L++ +E ++K+ I I+
Sbjct: 43 KAFEDSKKGSYDEVREAIREVNVDSSGRVEPEDFVGIFNVLKKGVEGTEVKKGRITIKGS 102
Query: 172 ETN--------------KIIEDIKETTPIVYEKHEINENKHDWFDVTEDGAACVEIIQDK 309
++ K I + P V + IN ++FD +DG ++I D
Sbjct: 103 SSSVSHTINEEERREFIKHINSVLAGDPDVGSRVPINTETFEFFDQCKDGLILSKLINDS 162
Query: 310 IEE 318
+ +
Sbjct: 163 VPD 165
>SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 993
Score = 24.6 bits (51), Expect = 6.7
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 340 LNPEAAEFSLCGDVDNQ 390
LNP FSL GDVDN+
Sbjct: 520 LNPVHPPFSLPGDVDNK 536
>SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatase
Ppe1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 305
Score = 24.2 bits (50), Expect = 8.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 433 NQLTLLALVHKLHRIDYRHHHIRK 362
N LTL+A H+L + Y++H K
Sbjct: 226 NDLTLIARAHQLVQEGYKYHFADK 249
>SPAC3F10.17 |||ribosome biogenesis protein Ltv1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 386
Score = 24.2 bits (50), Expect = 8.9
Identities = 18/85 (21%), Positives = 40/85 (47%)
Frame = +1
Query: 22 KQQVHDILKRERKEIETQILAEIDTTEIVFLEQALEMLKLKEDHINIQFDETNKIIEDIK 201
+ +V +++ + + +T+ A + + AL + + + + D +K+ E
Sbjct: 258 RDEVPELVSSSKSKSKTKRKARTALSSVSMSSSAL----FRNEGLTLLDDRFDKVEE--- 310
Query: 202 ETTPIVYEKHEINENKHDWFDVTED 276
E TPI E+ I+ ++ D FD+ D
Sbjct: 311 EYTPIKDERELIDPDQKDVFDLVND 335
>SPCC965.11c |||amino acid transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 537
Score = 24.2 bits (50), Expect = 8.9
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +2
Query: 2 HEDLKQINSRSMTFSRGREKKSKPKYWRKLIQLKLSFWNKHWK 130
+ED+ IN R + ++S K K SFWN+ WK
Sbjct: 495 YEDMDFINGRRVIEPTYSNEQSSDKETED--GKKTSFWNRVWK 535
>SPAC1B3.09c |||Noc2p-Noc3p complex subunit Noc2 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 528
Score = 24.2 bits (50), Expect = 8.9
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 139 LKEDHINIQFDETNKIIEDIK 201
LKE N+ FD +KI++D++
Sbjct: 135 LKETLDNVDFDARSKILQDLR 155
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 24.2 bits (50), Expect = 8.9
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 134 NISNACSKKTISVVSISANIWVSISFLSLLRM 39
N SNACS + V+ S + W S F LR+
Sbjct: 1205 NESNACSSNVLEHVASSFSKWHSKVFSRNLRL 1236
>SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 440
Score = 24.2 bits (50), Expect = 8.9
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 185 SLKTLKRRLQLCMKNMKLMRINMIGSM 265
++K L + ++L N L++IN IGS+
Sbjct: 327 NVKRLSKAIELKCANALLVKINQIGSL 353
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.133 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,742,624
Number of Sequences: 5004
Number of extensions: 34251
Number of successful extensions: 112
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 112
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 158122380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
- SilkBase 1999-2023 -