Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_K21
(438 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical pr... 37 0.006
Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical pr... 35 0.030
Z82256-5|CAB54184.1| 210|Caenorhabditis elegans Hypothetical pr... 34 0.052
AL031634-1|CAA21034.1| 256|Caenorhabditis elegans Hypothetical ... 30 0.64
AC006810-5|AAF59629.2| 516|Caenorhabditis elegans Cytochrome p4... 30 0.85
AF016450-13|AAB65988.2| 472|Caenorhabditis elegans Hypothetical... 29 1.1
U00032-6|AAA50634.1| 389|Caenorhabditis elegans Hypothetical pr... 28 2.6
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr... 28 2.6
U61954-2|ABS19469.1| 957|Caenorhabditis elegans Hypothetical pr... 28 3.4
AF040657-2|AAB95050.2| 312|Caenorhabditis elegans Hypothetical ... 28 3.4
Z29560-9|CAA82661.3| 148|Caenorhabditis elegans Hypothetical pr... 27 6.0
U64848-2|AAM29669.2| 376|Caenorhabditis elegans Hypothetical pr... 27 6.0
U64833-7|AAB04819.1| 254|Caenorhabditis elegans Hypothetical pr... 27 6.0
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 27 6.0
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 27 6.0
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 27 7.9
AL117204-39|CAB55145.4| 422|Caenorhabditis elegans Hypothetical... 27 7.9
AF043700-8|AAB97574.2| 374|Caenorhabditis elegans Hypothetical ... 27 7.9
AC024763-6|AAO12403.1| 603|Caenorhabditis elegans Calpain famil... 27 7.9
AC024763-5|AAO12402.1| 716|Caenorhabditis elegans Calpain famil... 27 7.9
AC006671-6|AAF39916.1| 411|Caenorhabditis elegans Hypothetical ... 27 7.9
>Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical
protein C23H4.6 protein.
Length = 1137
Score = 37.1 bits (82), Expect = 0.006
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Frame = +1
Query: 10 FEANKQQVHDILKRERKEIETQILAEIDTTEIVFLEQALEMLKLKEDHINIQFDETNKII 189
F N++QV + + E + L ++ +I +E+ L L ++ I D+ +K
Sbjct: 666 FGVNQKQVDEETLEQELEAANRELIRLENHDIKLIEKTLRELTMERSTIKSTIDKLDK-- 723
Query: 190 EDIKETTPIVYEKHEINENKHDW-FDVTE-DGAACVEIIQDKIEELSIVDSGLNPEA 354
+T + YE+ +I+ N +DW D+T+ V+ I D + EL S L EA
Sbjct: 724 ----KTRELQYERVKIDRNINDWKADMTQCANTEQVDNINDALGELQEKLSILEEEA 776
>Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical
protein F36G3.1 protein.
Length = 964
Score = 34.7 bits (76), Expect = 0.030
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = +1
Query: 25 QQVHDILKRERKEIETQILAEIDTTEIVFLEQALEMLKLKEDHINIQFDETNKIIEDIKE 204
QQ D ++ E ++ T++ +EID + + E+ LKE N+ + N + +D+
Sbjct: 697 QQTIDGIEIEAEQQYTELTSEIDELCEIVQRKDQELAILKEKVTNV-INIENSLKDDVDS 755
Query: 205 TTPIVYEKHEINENKHDWFDVTEDGAACVEIIQDK-IEELSI 327
IV + EI EN + D V ++DK +EE ++
Sbjct: 756 QKVIVQRQKEIIENLREELDAITKKLGEVTKLRDKAVEEATL 797
>Z82256-5|CAB54184.1| 210|Caenorhabditis elegans Hypothetical
protein B0513.2 protein.
Length = 210
Score = 33.9 bits (74), Expect = 0.052
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Frame = +1
Query: 7 GFEANKQQVHDILKRERKE-IETQILAEIDTTEIV-FLEQALEMLKLKE-DHIN-IQFDE 174
G + QQ+ + RKE +T + + T+ + FLE L MLK K H+N I E
Sbjct: 18 GDDRKVQQIATFFRESRKEDAKTSVPEAVKVTKALEFLE--LSMLKQKRISHMNKIHATE 75
Query: 175 TNKIIEDIKETTPIVYEKHEINENK 249
++ E+I ++ +Y+K E+ +N+
Sbjct: 76 CDQFAEEIDQSIEEMYKKMEVAKNE 100
>AL031634-1|CAA21034.1| 256|Caenorhabditis elegans Hypothetical
protein Y32B12C.1 protein.
Length = 256
Score = 30.3 bits (65), Expect = 0.64
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +1
Query: 4 RGFEANKQQVHDILKRERKEIE-TQILAEIDTTEIVFLEQALEMLKLKEDHINIQFDETN 180
R + N VH + +K IE T+ E D ++ LE ++ D +N++F+E N
Sbjct: 66 RRYGVNPMYVHFLFCYYKKNIEDTRGRLEDD-------KETLEEIQRTHDELNVKFEELN 118
Query: 181 KI---IEDIKETTPIVYEKHEINENKH 252
K+ I+ KE+ VY +E E KH
Sbjct: 119 KVKTFIKKQKESKGNVYLPNEYTE-KH 144
>AC006810-5|AAF59629.2| 516|Caenorhabditis elegans Cytochrome p450
family protein 32B1 protein.
Length = 516
Score = 29.9 bits (64), Expect = 0.85
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = +1
Query: 37 DILKRERKEIETQILAEIDTTEIVFLEQALEMLKLKEDHINIQFDE 174
D+++ +KE++T + +T ++ FL+ +LK +E+H +I DE
Sbjct: 262 DVIENRKKELKTHNSEQNETKKLAFLDY---LLKSQEEHPDILTDE 304
>AF016450-13|AAB65988.2| 472|Caenorhabditis elegans Hypothetical
protein B0238.9 protein.
Length = 472
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Frame = +1
Query: 331 DSGLNPEAAEFSLC----GDVDNQSGEVYVPEPIT 423
DSGL+ + FSL GDVDNQ G+ +V I+
Sbjct: 300 DSGLDQQTPRFSLSSSSGGDVDNQHGDFHVETRIS 334
>U00032-6|AAA50634.1| 389|Caenorhabditis elegans Hypothetical
protein F37A4.6 protein.
Length = 389
Score = 28.3 bits (60), Expect = 2.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 146 RIILIYNLMKPTKSLKTLKRRLQLCMKNMKLM 241
R+ IYN+ TKS+K L+R+L N +
Sbjct: 65 RLSTIYNIKSHTKSMKRLRRKLASIFSNSNFL 96
>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical
protein C06E1.10 protein.
Length = 1148
Score = 28.3 bits (60), Expect = 2.6
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +1
Query: 187 IEDIKETTPIVYEKHEINENKHDWFDVTEDGAACVEIIQDKIEELSIVDSGLNPEAAEFS 366
+ED KE TP + ++++ D D+ E GAA E D EE D L+ E S
Sbjct: 508 LEDFKEETPETEDFEDVDDGLMDGDDMNERGAA--EAFDD-YEEFENGDGDLSDGKVENS 564
Query: 367 L 369
+
Sbjct: 565 I 565
>U61954-2|ABS19469.1| 957|Caenorhabditis elegans Hypothetical
protein F41H10.6c protein.
Length = 957
Score = 27.9 bits (59), Expect = 3.4
Identities = 15/57 (26%), Positives = 32/57 (56%)
Frame = +1
Query: 19 NKQQVHDILKRERKEIETQILAEIDTTEIVFLEQALEMLKLKEDHINIQFDETNKII 189
+K V D+++ E+K E I ++ + + VF+ + +K+ +D + D TN+I+
Sbjct: 76 DKSMVKDLMESEKKTQE-DINSQCEKYDSVFMTEFQNSMKVAKDGVACVRDLTNRIM 131
>AF040657-2|AAB95050.2| 312|Caenorhabditis elegans Hypothetical
protein T20H9.1 protein.
Length = 312
Score = 27.9 bits (59), Expect = 3.4
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +1
Query: 64 IETQILAEIDTTEIVFLEQALEMLKLKEDHINIQFDETNKIIEDIKETTPIVYEKHEINE 243
I Q+L +++ +++ + L+ D I I FD +ED K+ T I +++ +N
Sbjct: 14 ISAQVLEKVEPVDLLACRKVCRCLRASIDRIGIHFDSICFYLED-KDVT-IYFDEIAVNY 71
Query: 244 NKHDWFDV 267
+ DV
Sbjct: 72 TSAENRDV 79
>Z29560-9|CAA82661.3| 148|Caenorhabditis elegans Hypothetical
protein K03H1.9 protein.
Length = 148
Score = 27.1 bits (57), Expect = 6.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 436 RNQLTLLALVHKLHRIDYRHHHIRK 362
R L LL L ++LHR+ + HH RK
Sbjct: 12 RYHLLLLRLHYRLHRLRHPFHHHRK 36
>U64848-2|AAM29669.2| 376|Caenorhabditis elegans Hypothetical
protein C50E3.6 protein.
Length = 376
Score = 27.1 bits (57), Expect = 6.0
Identities = 17/71 (23%), Positives = 34/71 (47%)
Frame = +1
Query: 40 ILKRERKEIETQILAEIDTTEIVFLEQALEMLKLKEDHINIQFDETNKIIEDIKETTPIV 219
+ K R+E+ T+ E D + +E+ E + KE+ ++ E + KE++PI+
Sbjct: 195 VRKETRQEMRTKTKKE-DIALLSRIEEKPEKMTEKEEEPRVEEKENVEFANVGKESSPIL 253
Query: 220 YEKHEINENKH 252
+K + H
Sbjct: 254 LQKRGDRSSDH 264
>U64833-7|AAB04819.1| 254|Caenorhabditis elegans Hypothetical
protein B0507.9 protein.
Length = 254
Score = 27.1 bits (57), Expect = 6.0
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 12/109 (11%)
Frame = +1
Query: 73 QILAEIDTTEIVFLEQALEMLKLKE-------DHINIQFDETNKIIEDIKETTPIVYEKH 231
++L I T + LEQ+L +LKE I Q + NK+I + K + E
Sbjct: 140 EVLLSISTM-VTNLEQSLACYELKEVLMNGMISQIRTQISDFNKVIPNFKRI--LNSENQ 196
Query: 232 EINENKHDWF-DVTEDGAA---CVEIIQDKIEELS-IVDSGLNPEAAEF 363
EI+ + ++ F D+ + A C+ +I +K E++ +++ +N +F
Sbjct: 197 EIDPDNYEKFVDMKKRLFAMVNCLHLISEKRGEMNRLIEEKMNLSMPQF 245
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 27.1 bits (57), Expect = 6.0
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 112 LEQALEMLKLKEDHINIQFDETNKIIEDIKETTPIVYE-KHEINENK 249
+EQ L+ L+ KE + QFD++ I+ ++ IV E +++E K
Sbjct: 31 IEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEEK 77
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 27.1 bits (57), Expect = 6.0
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 112 LEQALEMLKLKEDHINIQFDETNKIIEDIKETTPIVYE-KHEINENK 249
+EQ L+ L+ KE + QFD++ I+ ++ IV E +++E K
Sbjct: 39 IEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEEK 85
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
assigned gene nameprotein 278 protein.
Length = 1130
Score = 26.6 bits (56), Expect = 7.9
Identities = 16/58 (27%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Frame = +1
Query: 10 FEANKQQVHDILKRERKEIETQILAE-IDTTEIVFLEQ--ALEMLKLKEDHINIQFDE 174
FE K+Q + L++E ++ E Q+L + T+++ LEQ +E+ +L+E+ +++ ++
Sbjct: 202 FEREKEQALEKLRKEHQK-EIQVLEQRFSDTQLLNLEQKYIIEIQRLEEERKSLRTEK 258
>AL117204-39|CAB55145.4| 422|Caenorhabditis elegans Hypothetical
protein Y116A8C.9 protein.
Length = 422
Score = 26.6 bits (56), Expect = 7.9
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 289 RMQHHLRSHRTNHVYSH*FHVF 224
R +H + +HR HVYS H F
Sbjct: 208 RSRHFIPAHRRQHVYSAILHTF 229
>AF043700-8|AAB97574.2| 374|Caenorhabditis elegans Hypothetical
protein K09H9.1 protein.
Length = 374
Score = 26.6 bits (56), Expect = 7.9
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 178 NKIIEDIKETTPIVYEKHEINENKHDWFDVTEDGAACVEIIQDKI-EELSIVDSGLNPEA 354
N I E+I + + H N++ +D T A E K+ +ELSIVDS L E
Sbjct: 24 NSIFEEISSNSQPSH--HHTNDSITLPYDATIQKIAEKEKNLSKLLKELSIVDSSLEEEK 81
Query: 355 AEF 363
A F
Sbjct: 82 ASF 84
>AC024763-6|AAO12403.1| 603|Caenorhabditis elegans Calpain family
protein 4, isoform b protein.
Length = 603
Score = 26.6 bits (56), Expect = 7.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 175 TNKIIEDIKETTPIVYEKHEINENKHDWFDVTEDG 279
T +I ++I E T V E E +H W ++ EDG
Sbjct: 536 TAEIFDEIAEMTG-VNRATETVEEEHQWHEIMEDG 569
>AC024763-5|AAO12402.1| 716|Caenorhabditis elegans Calpain family
protein 4, isoform a protein.
Length = 716
Score = 26.6 bits (56), Expect = 7.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 175 TNKIIEDIKETTPIVYEKHEINENKHDWFDVTEDG 279
T +I ++I E T V E E +H W ++ EDG
Sbjct: 536 TAEIFDEIAEMTG-VNRATETVEEEHQWHEIMEDG 569
>AC006671-6|AAF39916.1| 411|Caenorhabditis elegans Hypothetical
protein K08A2.1 protein.
Length = 411
Score = 26.6 bits (56), Expect = 7.9
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 179 TKSLKTLKRRLQLCMKNMKLMRINMIGSM*PKMVLHAWKLY 301
T+ L+RRL++C++N R+N + ++ LH W+LY
Sbjct: 139 TRGQAELRRRLKVCIRN---DRLNKSAT---ELKLHEWELY 173
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.312 0.133 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,438,538
Number of Sequences: 27780
Number of extensions: 187028
Number of successful extensions: 542
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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