Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_K19
(209 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC694.03 |||conserved fungal protein|Schizosaccharomyces pombe... 26 0.78
SPAC1039.07c |||4-aminobutyrate aminotransferase |Schizosaccharo... 25 1.4
SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subuni... 25 1.8
SPBC691.03c |apl3||AP-2 adaptor complex subunit Alp3 |Schizosacc... 25 1.8
SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces po... 24 2.4
SPCC553.02 |||glutamine-dependent NAD|Schizosaccharomyces pombe|... 24 3.2
SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr 1... 24 3.2
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 23 4.2
SPAC3H5.11 |||NAD/NADH kinase |Schizosaccharomyces pombe|chr 1||... 23 4.2
SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 23 5.5
SPAC19A8.15 |trp2||tryptophan synthase|Schizosaccharomyces pombe... 23 5.5
SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 23 5.5
SPAC24H6.10c |||phospho-2-dehydro-3-deoxyheptonate aldolase |Sch... 23 7.3
SPBC24C6.09c |||phosphoketolase |Schizosaccharomyces pombe|chr 2... 23 7.3
SPBC1271.04c |||deoxyhypusine synthase|Schizosaccharomyces pombe... 23 7.3
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 23 7.3
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 22 9.6
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 22 9.6
>SPAC694.03 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 249
Score = 25.8 bits (54), Expect = 0.78
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2
Query: 58 DKIADVRNKLSPHEQVVLV 2
DK + NKL P EQV LV
Sbjct: 110 DKCRSISNKLGPREQVYLV 128
>SPAC1039.07c |||4-aminobutyrate aminotransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 25.0 bits (52), Expect = 1.4
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +2
Query: 29 ELISDVSDLITVKNFEPVYFNSGADALEAALNMESFVT 142
+L +++SDL+ + ++ ++G +A EAAL M T
Sbjct: 96 QLATELSDLLPDGLDKTLFLSTGGEANEAALRMAKVYT 133
>SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subunit
Orc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 707
Score = 24.6 bits (51), Expect = 1.8
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 98 ADALEAALNMESFVTKSIRGVIDVCERDPKPKENNN 205
+DA+ A + V+ R +D+C R + EN N
Sbjct: 539 SDAIRFAARKVAAVSGDARRALDICRRASELAENKN 574
>SPBC691.03c |apl3||AP-2 adaptor complex subunit Alp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 878
Score = 24.6 bits (51), Expect = 1.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 50 DLITVKNFEPVYFNSGADALEAALNMESFV 139
DLI + FEP+ G D L +L + +FV
Sbjct: 176 DLINPEWFEPIVMILGDDDLNVSLAVSNFV 205
>SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 220
Score = 24.2 bits (50), Expect = 2.4
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 53 LITVKN--FEPVYFNSGADALEAALNMESFVTKSIRGVIDVCERDPKPKEN 199
++ V+N PVY +SG ALE + + + + +D PK++
Sbjct: 9 IVDVQNDFVHPVYISSGESALEVVPVINRLLENDYKWDTVIATKDVHPKDH 59
>SPCC553.02 |||glutamine-dependent NAD|Schizosaccharomyces pombe|chr
3|||Manual
Length = 700
Score = 23.8 bits (49), Expect = 3.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 139 YERFHVQSSLQSIGPAIEVYR 77
YER HV SL S ++YR
Sbjct: 297 YERIHVNFSLSSYQQDYDIYR 317
>SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1004
Score = 23.8 bits (49), Expect = 3.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 118 SSLQSIGPAIEVYRFEVFDGDKIADVRNKLS 26
SSLQS+G + F V+ GD V NK++
Sbjct: 720 SSLQSVGYPLPQEVFLVYIGDSGISVFNKIN 750
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 23.4 bits (48), Expect = 4.2
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 14 LLMRGELISDVSDLITVKNFEPVYFNSGADALEAALNMESFVT 142
+++ GE+++ S L+ K V S ALE AL++ +T
Sbjct: 97 IILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALSIIDEIT 139
>SPAC3H5.11 |||NAD/NADH kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 393
Score = 23.4 bits (48), Expect = 4.2
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -3
Query: 147 LFVTNDSMF-RAASKASAPLLKYTGSKFLTVIRSLTSEISSP 25
L V N+ + R + A + ++ Y SK+LT +++ IS+P
Sbjct: 243 LVVLNEVVIDRGPNTAMSDIMLYVDSKYLTTVKADGLCISTP 284
>SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1496
Score = 23.0 bits (47), Expect = 5.5
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 32 LISDVSDLITVKNFEPV 82
++S +S L+ +KN EPV
Sbjct: 88 VVSHISSLLNIKNREPV 104
>SPAC19A8.15 |trp2||tryptophan synthase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 697
Score = 23.0 bits (47), Expect = 5.5
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -2
Query: 154 SDALCYERFHVQSSLQSIGPAIEVYRFEVFDGDKIADVRNKLSPHEQVVL 5
+DA C E F L+ I PA+E V+ G ++A KL + +V+
Sbjct: 622 TDAQCLEGFRALCHLEGIIPALE-SSHAVYGGMELA---KKLPKDKDIVI 667
>SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1096
Score = 23.0 bits (47), Expect = 5.5
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 103 IGPAIEVYRFEVFDGDKIADVRNKLSPH 20
+G +EV F F+G A +R +PH
Sbjct: 542 VGDPLEVTLFTQFNGTFCATIRASNTPH 569
>SPAC24H6.10c |||phospho-2-dehydro-3-deoxyheptonate aldolase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 368
Score = 22.6 bits (46), Expect = 7.3
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +2
Query: 29 ELISDVSDLITVKNFEPVYFNSGADALEAALNMESFVTKSIRGVIDVCERDPKP 190
EL S +S I KN DA+ ++ N F++ + +GV+ + P
Sbjct: 188 ELASGLSFPIGFKNATDGNIGIAIDAMNSSANPHHFLSVTKQGVVAIVTTTGNP 241
>SPBC24C6.09c |||phosphoketolase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 825
Score = 22.6 bits (46), Expect = 7.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 199 VFLGFGIPLAYVNDASD 149
+F GFG +A VND D
Sbjct: 270 LFSGFGYEVAIVNDTPD 286
>SPBC1271.04c |||deoxyhypusine synthase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 350
Score = 22.6 bits (46), Expect = 7.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 27 ESLFLTSAILSPSKTSNLYTSIAGP 101
ESL + ++ SK S+L T + GP
Sbjct: 3 ESLAKDAVFVASSKPSDLTTEVVGP 27
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 22.6 bits (46), Expect = 7.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 2 HEDYLLMRGELISDVSDLITVKNF 73
H+D+L+ RG+L + D + KNF
Sbjct: 1332 HDDWLIQRGDLEKALKD--SEKNF 1353
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 22.2 bits (45), Expect = 9.6
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 4/30 (13%)
Frame = -2
Query: 82 YRFEVFDGDKIADVRNKL----SPHEQVVL 5
YRFEV D + +AD+ +L +PH+ ++L
Sbjct: 1541 YRFEVKDWNLVADMFIELFKETTPHQLLLL 1570
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 22.2 bits (45), Expect = 9.6
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 23 RGELISDVSDLITVKNFEPVYFNSGADALEAALNME 130
+GEL+S S L ++ +P N ++ +A++N+E
Sbjct: 329 KGELVSLDSQLEGLRVDDPNSANQSFESKKASINLE 364
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 859,604
Number of Sequences: 5004
Number of extensions: 13942
Number of successful extensions: 52
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 2,362,478
effective HSP length: 49
effective length of database: 2,117,282
effective search space used: 42345640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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