Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_K19
         (209 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40936-1|AAL65777.2|  770|Caenorhabditis elegans Hypothetical pr...    28   1.0  
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr...    27   1.4  
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr...    27   1.4  
AF132883-1|AAD25092.1|  925|Caenorhabditis elegans UNC-52/Perlec...    27   1.4  
U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin recepto...    26   4.2  
U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical pr...    26   4.2  
U40414-3|AAA81406.1|  321|Caenorhabditis elegans Hypothetical pr...    26   4.2  
AY064245-1|AAL40865.1| 1003|Caenorhabditis elegans insulin recep...    26   4.2  
Z49128-8|CAA88960.2|  989|Caenorhabditis elegans Hypothetical pr...    25   5.6  
AL021171-6|CAA15960.2|  989|Caenorhabditis elegans Hypothetical ...    25   5.6  
AF038608-17|AAC25822.2|  425|Caenorhabditis elegans Hypothetical...    25   7.3  
AC024817-37|AAF59579.1|  107|Caenorhabditis elegans Hypothetical...    25   9.7  

>U40936-1|AAL65777.2|  770|Caenorhabditis elegans Hypothetical
           protein C13E3.1 protein.
          Length = 770

 Score = 27.9 bits (59), Expect = 1.0
 Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
 Frame = -2

Query: 121 QSSLQSIGPAIE--VYRFEVFDGDKIADVRNKL 29
           +S+L  +G AIE  VY   V+ G+KIA+ R+++
Sbjct: 706 ESNLTFVGEAIEKDVYMVAVYRGEKIAEDRDRI 738


>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
            ZC101.2e protein.
          Length = 3375

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 11/45 (24%), Positives = 25/45 (55%)
 Frame = -2

Query: 139  YERFHVQSSLQSIGPAIEVYRFEVFDGDKIADVRNKLSPHEQVVL 5
            Y+  H ++ +   G  +  Y F++ +G +I +  N ++P+E  V+
Sbjct: 2587 YDTIHHEAKITDYGTVL--YEFDIGNGRQIVETTNPINPNEWNVI 2629


>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
            ZC101.2e protein.
          Length = 3375

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 11/45 (24%), Positives = 25/45 (55%)
 Frame = -2

Query: 139  YERFHVQSSLQSIGPAIEVYRFEVFDGDKIADVRNKLSPHEQVVL 5
            Y+  H ++ +   G  +  Y F++ +G +I +  N ++P+E  V+
Sbjct: 2587 YDTIHHEAKITDYGTVL--YEFDIGNGRQIVETTNPINPNEWNVI 2629


>AF132883-1|AAD25092.1|  925|Caenorhabditis elegans UNC-52/Perlecan
           protein.
          Length = 925

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 11/45 (24%), Positives = 25/45 (55%)
 Frame = -2

Query: 139 YERFHVQSSLQSIGPAIEVYRFEVFDGDKIADVRNKLSPHEQVVL 5
           Y+  H ++ +   G  +  Y F++ +G +I +  N ++P+E  V+
Sbjct: 137 YDTIHHEAKITDYGTVL--YEFDIGNGRQIVETTNPINPNEWNVI 179


>U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin receptor
            substrate homologprotein 1 protein.
          Length = 1003

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +3

Query: 141  QRASEASLTYARGIPNPRKTT 203
            +R  EAS T +RG P+ RKTT
Sbjct: 955  EREGEASETDSRGEPSDRKTT 975


>U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical
           protein F31E3.4 protein.
          Length = 1131

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -3

Query: 159 TPLMLFVTNDSMFRAASKASAPLLKYT 79
           T  ++F  +D+M RA ++   P+ K+T
Sbjct: 78  TESLIFTLSDTMLRATTRQGIPVAKFT 104


>U40414-3|AAA81406.1|  321|Caenorhabditis elegans Hypothetical
           protein F53B3.6 protein.
          Length = 321

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 206 CCCFPWVWDP 177
           CCCF +VW P
Sbjct: 296 CCCFKFVWPP 305


>AY064245-1|AAL40865.1| 1003|Caenorhabditis elegans insulin receptor
            substrate-likeprotein protein.
          Length = 1003

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +3

Query: 141  QRASEASLTYARGIPNPRKTT 203
            +R  EAS T +RG P+ RKTT
Sbjct: 955  EREGEASETDSRGEPSDRKTT 975


>Z49128-8|CAA88960.2|  989|Caenorhabditis elegans Hypothetical
           protein M03C11.8 protein.
          Length = 989

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 9/41 (21%), Positives = 21/41 (51%)
 Frame = -2

Query: 142 CYERFHVQSSLQSIGPAIEVYRFEVFDGDKIADVRNKLSPH 20
           C +  H+    + +GPA++     ++  D+I + +  L P+
Sbjct: 580 CEDITHLLQHFKQLGPALDTKNKALYQQDRIEEAKAILQPY 620


>AL021171-6|CAA15960.2|  989|Caenorhabditis elegans Hypothetical
           protein M03C11.8 protein.
          Length = 989

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 9/41 (21%), Positives = 21/41 (51%)
 Frame = -2

Query: 142 CYERFHVQSSLQSIGPAIEVYRFEVFDGDKIADVRNKLSPH 20
           C +  H+    + +GPA++     ++  D+I + +  L P+
Sbjct: 580 CEDITHLLQHFKQLGPALDTKNKALYQQDRIEEAKAILQPY 620


>AF038608-17|AAC25822.2|  425|Caenorhabditis elegans Hypothetical
           protein C09G12.9 protein.
          Length = 425

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -2

Query: 178 PLAYVNDASDALCYERFHVQSSLQSIGPAIEVYRFEVFD 62
           P+ YVN  S  +  E  HV    +   P +  +RF  +D
Sbjct: 85  PICYVNPTSTMVIKESEHVNKEGKVFLPYLNEWRFPGYD 123


>AC024817-37|AAF59579.1|  107|Caenorhabditis elegans Hypothetical
           protein Y54G2A.19 protein.
          Length = 107

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 86  FNSGADALEAALNMESFVTKSIRGVIDVCERDP 184
           +NS  D   AA++ +  + K + G +D  E DP
Sbjct: 70  YNSRTDPENAAMDSDEELRKMMEGFVDDEESDP 102


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,756,027
Number of Sequences: 27780
Number of extensions: 80426
Number of successful extensions: 251
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 251
length of database: 12,740,198
effective HSP length: 49
effective length of database: 11,378,978
effective search space used: 227579560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)