Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_K19
(209 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 0.69
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 0.91
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 20 2.8
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 19 4.9
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 19 4.9
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 19 4.9
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 19 6.4
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 19 6.4
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 19 6.4
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 19 8.5
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 19 8.5
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 19 8.5
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 0.69
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -2
Query: 175 LAYVNDASDALCYERFHVQSSLQSIGPAIEVYRFEVFDGDKIADVRNKLSP 23
L ++ S LC + + + G E +R + D +A +R KL+P
Sbjct: 584 LGWLCGLSSMLCIPGYMIYIWFTTSGTISEKFRKLIRIEDNVATLRMKLNP 634
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.8 bits (44), Expect = 0.91
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -2
Query: 175 LAYVNDASDALCYERFHVQSSLQSIGPAIEVYRFEVFDGDKIADVRNKLSP 23
L ++ S LC + + + G E +R + D +A +R KL+P
Sbjct: 531 LGWLCGLSSMLCIPGYMIYIWFTTSGTISEKFRKLIRIEDDVATLRMKLNP 581
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 20.2 bits (40), Expect = 2.8
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 52 SYHRQKLR 75
SYH+QKLR
Sbjct: 138 SYHKQKLR 145
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 19.4 bits (38), Expect = 4.9
Identities = 5/13 (38%), Positives = 11/13 (84%)
Frame = +3
Query: 159 SLTYARGIPNPRK 197
++TY+ G+P P++
Sbjct: 298 TMTYSNGLPFPQR 310
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 19.4 bits (38), Expect = 4.9
Identities = 5/13 (38%), Positives = 11/13 (84%)
Frame = +3
Query: 159 SLTYARGIPNPRK 197
++TY+ G+P P++
Sbjct: 298 TMTYSNGLPFPQR 310
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 19.4 bits (38), Expect = 4.9
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = -2
Query: 94 AIEVYRFEVFDGDKIADVRNK 32
A+ YRF+VF + ++ + K
Sbjct: 384 AVTTYRFQVFAENGVSALAGK 404
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 19.0 bits (37), Expect = 6.4
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 54 LSPSKTSNLYTSIAGP 101
L+P++ S Y IAGP
Sbjct: 515 LNPNEKSLHYLHIAGP 530
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 19.0 bits (37), Expect = 6.4
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 54 LSPSKTSNLYTSIAGP 101
L+P++ S Y IAGP
Sbjct: 515 LNPNEKSLHYLHIAGP 530
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 19.0 bits (37), Expect = 6.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 148 HQRRH*RMREGSQTQGKQQQ 207
HQ H + + +Q Q +QQQ
Sbjct: 817 HQSTHPQAQAQAQPQQQQQQ 836
Score = 19.0 bits (37), Expect = 6.4
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +1
Query: 97 GRCFGGCSEHGIVRNKE 147
G GGC G+V++++
Sbjct: 967 GGGMGGCQPGGVVQSQQ 983
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 18.6 bits (36), Expect = 8.5
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = -2
Query: 112 LQSIGPAIEVYRFEVFDGDKIADVRNKLSPHEQVV 8
L + AIE RFE+ + + + PH +V
Sbjct: 99 LTKLNNAIEEKRFELTNRKGVVFHHDDARPHTYLV 133
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 18.6 bits (36), Expect = 8.5
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -1
Query: 140 LRTIPCSEQPPK 105
LRT+PC PK
Sbjct: 623 LRTLPCLLPRPK 634
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 18.6 bits (36), Expect = 8.5
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -1
Query: 140 LRTIPCSEQPPK 105
LRT+PC PK
Sbjct: 591 LRTLPCLLPRPK 602
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,021
Number of Sequences: 438
Number of extensions: 1106
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used: 3039192
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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