SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_K10
         (445 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X77926-1|CAA54898.1|  218|Drosophila melanogaster BBC1 protein p...   144   6e-35
AE014134-1746|ABC65888.1|  218|Drosophila melanogaster CG4651-PB...   144   6e-35
AE014134-1745|AAF52842.1|  218|Drosophila melanogaster CG4651-PA...   144   6e-35
BT001684-1|AAN71439.1|  271|Drosophila melanogaster RE57703p pro...    33   0.13 
AY069249-1|AAL39394.1|  271|Drosophila melanogaster GM02347p pro...    33   0.13 
AJ238252-1|CAB41432.1|  271|Drosophila melanogaster 1-acylglycer...    33   0.13 
AE014134-1520|AAF52680.2|  271|Drosophila melanogaster CG17608-P...    33   0.13 
AE014134-1519|AAN10670.1|  271|Drosophila melanogaster CG17608-P...    33   0.13 
AY561850-1|AAS68533.1|  970|Drosophila melanogaster gag protein ...    30   1.2  
AJ566116-1|CAD92792.1|  970|Drosophila melanogaster gag protein ...    30   1.2  
AJ277189-1|CAB85484.1|  567|Drosophila melanogaster mod(mdg4)62....    30   1.2  
AE014297-2998|AAO41585.1|  567|Drosophila melanogaster CG32491-P...    30   1.2  
AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1 pr...    29   3.8  
AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB ...    29   3.8  
AY089326-1|AAL90064.1|  457|Drosophila melanogaster AT13663p pro...    28   5.0  
AE014298-708|AAF46009.2|  581|Drosophila melanogaster CG5062-PA ...    28   5.0  
U39303-1|AAB34134.1|  439|Drosophila melanogaster P26s4 protein.       27   8.7  
AY121640-1|AAM51967.1|  949|Drosophila melanogaster LD04710p pro...    27   8.7  
AY118588-1|AAM49957.1|  343|Drosophila melanogaster LD44987p pro...    27   8.7  
AY058759-1|AAL13988.1|  439|Drosophila melanogaster SD02658p pro...    27   8.7  
AY058722-1|AAL13951.1|  376|Drosophila melanogaster LD46483p pro...    27   8.7  
AE014298-1811|AAN09316.1|  343|Drosophila melanogaster CG3812-PB...    27   8.7  
AE014298-1810|AAF48201.1|  343|Drosophila melanogaster CG3812-PA...    27   8.7  
AE014297-3409|AAF56205.1|  439|Drosophila melanogaster CG5289-PA...    27   8.7  
AE014296-2938|AAF49321.2|  949|Drosophila melanogaster CG7510-PA...    27   8.7  
AE013599-3141|AAF46682.1|  376|Drosophila melanogaster CG9418-PA...    27   8.7  

>X77926-1|CAA54898.1|  218|Drosophila melanogaster BBC1 protein
           protein.
          Length = 218

 Score =  144 bits (348), Expect = 6e-35
 Identities = 75/131 (57%), Positives = 98/131 (74%), Gaps = 2/131 (1%)
 Frame = -2

Query: 438 SFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFP-KGKKVLKGEANEEERKLAT 262
           +FA+TIGIAVD RR+NKS+ES Q N+QRLKEYR++LILFP   KK+  GE++ EE KLAT
Sbjct: 88  NFAKTIGIAVDRRRKNKSLESRQRNIQRLKEYRSKLILFPINEKKIRAGESSLEECKLAT 147

Query: 261 QLRGPLMPVQQTAPKSVA-RPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPD 85
           QL+GP++P++   P  V  R +T+DEK FKA+  LR AR+ A+LVGIRAKR K+AAE+ D
Sbjct: 148 QLKGPVLPIKNEQPAVVEFREVTKDEKKFKAFATLRKARTDARLVGIRAKRAKEAAESED 207

Query: 84  DVTKAPTAVKE 52
                P   K+
Sbjct: 208 AAKGDPKKAKK 218


>AE014134-1746|ABC65888.1|  218|Drosophila melanogaster CG4651-PB,
           isoform B protein.
          Length = 218

 Score =  144 bits (348), Expect = 6e-35
 Identities = 75/131 (57%), Positives = 98/131 (74%), Gaps = 2/131 (1%)
 Frame = -2

Query: 438 SFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFP-KGKKVLKGEANEEERKLAT 262
           +FA+TIGIAVD RR+NKS+ES Q N+QRLKEYR++LILFP   KK+  GE++ EE KLAT
Sbjct: 88  NFAKTIGIAVDRRRKNKSLESRQRNIQRLKEYRSKLILFPINEKKIRAGESSLEECKLAT 147

Query: 261 QLRGPLMPVQQTAPKSVA-RPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPD 85
           QL+GP++P++   P  V  R +T+DEK FKA+  LR AR+ A+LVGIRAKR K+AAE+ D
Sbjct: 148 QLKGPVLPIKNEQPAVVEFREVTKDEKKFKAFATLRKARTDARLVGIRAKRAKEAAESED 207

Query: 84  DVTKAPTAVKE 52
                P   K+
Sbjct: 208 AAKGDPKKAKK 218


>AE014134-1745|AAF52842.1|  218|Drosophila melanogaster CG4651-PA,
           isoform A protein.
          Length = 218

 Score =  144 bits (348), Expect = 6e-35
 Identities = 75/131 (57%), Positives = 98/131 (74%), Gaps = 2/131 (1%)
 Frame = -2

Query: 438 SFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFP-KGKKVLKGEANEEERKLAT 262
           +FA+TIGIAVD RR+NKS+ES Q N+QRLKEYR++LILFP   KK+  GE++ EE KLAT
Sbjct: 88  NFAKTIGIAVDRRRKNKSLESRQRNIQRLKEYRSKLILFPINEKKIRAGESSLEECKLAT 147

Query: 261 QLRGPLMPVQQTAPKSVA-RPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPD 85
           QL+GP++P++   P  V  R +T+DEK FKA+  LR AR+ A+LVGIRAKR K+AAE+ D
Sbjct: 148 QLKGPVLPIKNEQPAVVEFREVTKDEKKFKAFATLRKARTDARLVGIRAKRAKEAAESED 207

Query: 84  DVTKAPTAVKE 52
                P   K+
Sbjct: 208 AAKGDPKKAKK 218


>BT001684-1|AAN71439.1|  271|Drosophila melanogaster RE57703p
           protein.
          Length = 271

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = -2

Query: 411 VDPRRRNKSVESLQINVQRLKEYRARLILFPKGKKVLKGEA---NEEERKLATQLRGPLM 241
           +D  R+  S+ SLQ   + ++E   +L+LFP+G +  K       +    +A Q + P+ 
Sbjct: 141 IDRSRKTDSINSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFHIALQGKSPVQ 200

Query: 240 PV 235
           PV
Sbjct: 201 PV 202


>AY069249-1|AAL39394.1|  271|Drosophila melanogaster GM02347p
           protein.
          Length = 271

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = -2

Query: 411 VDPRRRNKSVESLQINVQRLKEYRARLILFPKGKKVLKGEA---NEEERKLATQLRGPLM 241
           +D  R+  S+ SLQ   + ++E   +L+LFP+G +  K       +    +A Q + P+ 
Sbjct: 141 IDRSRKTDSINSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFHIALQGKSPVQ 200

Query: 240 PV 235
           PV
Sbjct: 201 PV 202


>AJ238252-1|CAB41432.1|  271|Drosophila melanogaster
           1-acylglycerol-3-phosphate O-acyltransferaseprotein.
          Length = 271

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = -2

Query: 411 VDPRRRNKSVESLQINVQRLKEYRARLILFPKGKKVLKGEA---NEEERKLATQLRGPLM 241
           +D  R+  S+ SLQ   + ++E   +L+LFP+G +  K       +    +A Q + P+ 
Sbjct: 141 IDRSRKTDSINSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFHIALQGKSPVQ 200

Query: 240 PV 235
           PV
Sbjct: 201 PV 202


>AE014134-1520|AAF52680.2|  271|Drosophila melanogaster CG17608-PB,
           isoform B protein.
          Length = 271

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = -2

Query: 411 VDPRRRNKSVESLQINVQRLKEYRARLILFPKGKKVLKGEA---NEEERKLATQLRGPLM 241
           +D  R+  S+ SLQ   + ++E   +L+LFP+G +  K       +    +A Q + P+ 
Sbjct: 141 IDRSRKTDSINSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFHIALQGKSPVQ 200

Query: 240 PV 235
           PV
Sbjct: 201 PV 202


>AE014134-1519|AAN10670.1|  271|Drosophila melanogaster CG17608-PA,
           isoform A protein.
          Length = 271

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = -2

Query: 411 VDPRRRNKSVESLQINVQRLKEYRARLILFPKGKKVLKGEA---NEEERKLATQLRGPLM 241
           +D  R+  S+ SLQ   + ++E   +L+LFP+G +  K       +    +A Q + P+ 
Sbjct: 141 IDRSRKTDSINSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFHIALQGKSPVQ 200

Query: 240 PV 235
           PV
Sbjct: 201 PV 202


>AY561850-1|AAS68533.1|  970|Drosophila melanogaster gag protein
           protein.
          Length = 970

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 19/53 (35%), Positives = 27/53 (50%)
 Frame = -2

Query: 246 LMPVQQTAPKSVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENP 88
           L P Q T P      +T  +K   A Q +  A++ A+LV   AKR + A +NP
Sbjct: 384 LHPAQDTNPSPAISAVTYTDKP-TATQNIFPAKTFAELVRENAKRSQTAMQNP 435


>AJ566116-1|CAD92792.1|  970|Drosophila melanogaster gag protein
           protein.
          Length = 970

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 19/53 (35%), Positives = 27/53 (50%)
 Frame = -2

Query: 246 LMPVQQTAPKSVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENP 88
           L P Q T P      +T  +K   A Q +  A++ A+LV   AKR + A +NP
Sbjct: 384 LHPAQDTNPSPAISAVTYTDKP-TATQNIFPAKTFAELVRENAKRSQTAMQNP 435


>AJ277189-1|CAB85484.1|  567|Drosophila melanogaster mod(mdg4)62.3
           protein.
          Length = 567

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 175 FEVLLILSDGSSNRFWCCLLYWHQ 246
           FE  L LS G   RFW C  +W+Q
Sbjct: 428 FEKTLKLSSGEEKRFWRCNQWWNQ 451


>AE014297-2998|AAO41585.1|  567|Drosophila melanogaster CG32491-PV,
           isoform V protein.
          Length = 567

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 175 FEVLLILSDGSSNRFWCCLLYWHQ 246
           FE  L LS G   RFW C  +W+Q
Sbjct: 428 FEKTLKLSSGEEKRFWRCNQWWNQ 451


>AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1
            protein.
          Length = 5327

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 8/129 (6%)
 Frame = -2

Query: 414  AVDPRRRNKSVESLQINVQRLKEYRARLILFPKGKKVLKGEAN---EEERKLATQLRGPL 244
            +V    ++ + ES +   + L + +A  I   K     K EA    EE R+ +   + PL
Sbjct: 3055 SVAENAKDSADESKEQRPESLPQSKAGSIKDEKSPLASKDEAEKSKEESRRESVAEQFPL 3114

Query: 243  MPVQQTAPKSVARPITEDEKNFKAYQYLRGAR-----SIAKLVGIRAKRLKDAAENPDDV 79
            +  + + P SVA  + ++ +  K    L         S+A  V   A++ K+ +      
Sbjct: 3115 VSKEVSRPASVAESVKDEAEKSKEESPLMSKEASRPASVAGSVKDEAEKSKEESRRESVA 3174

Query: 78   TKAPTAVKE 52
             K+P   KE
Sbjct: 3175 EKSPLPSKE 3183


>AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB
            protein.
          Length = 5412

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 8/129 (6%)
 Frame = -2

Query: 414  AVDPRRRNKSVESLQINVQRLKEYRARLILFPKGKKVLKGEAN---EEERKLATQLRGPL 244
            +V    ++ + ES +   + L + +A  I   K     K EA    EE R+ +   + PL
Sbjct: 3263 SVAENAKDSADESKEQRPESLPQSKAGSIKDEKSPLASKDEAEKSKEESRRESVAEQFPL 3322

Query: 243  MPVQQTAPKSVARPITEDEKNFKAYQYLRGAR-----SIAKLVGIRAKRLKDAAENPDDV 79
            +  + + P SVA  + ++ +  K    L         S+A  V   A++ K+ +      
Sbjct: 3323 VSKEVSRPASVAESVKDEAEKSKEESPLMSKEASRPASVAGSVKDEAEKSKEESRRESVA 3382

Query: 78   TKAPTAVKE 52
             K+P   KE
Sbjct: 3383 EKSPLPSKE 3391


>AY089326-1|AAL90064.1|  457|Drosophila melanogaster AT13663p
           protein.
          Length = 457

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 12/56 (21%)
 Frame = -2

Query: 408 DPRRRNKSVESLQINVQRLKEYRA------------RLILFPKGKKVLKGEANEEE 277
           D R  N++ E L++  Q+LK+ RA            R +LF  G+K+L  + N EE
Sbjct: 233 DQRDENRAYEYLKLKEQQLKQQRAEREAIAADEKRKRDVLFAVGQKILDAKDNREE 288


>AE014298-708|AAF46009.2|  581|Drosophila melanogaster CG5062-PA
           protein.
          Length = 581

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 12/56 (21%)
 Frame = -2

Query: 408 DPRRRNKSVESLQINVQRLKEYRA------------RLILFPKGKKVLKGEANEEE 277
           D R  N++ E L++  Q+LK+ RA            R +LF  G+K+L  + N EE
Sbjct: 357 DQRDENRAYEYLKLKEQQLKQQRAEREAIAADEKRKRDVLFAVGQKILDAKDNREE 412


>U39303-1|AAB34134.1|  439|Drosophila melanogaster P26s4 protein.
          Length = 439

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -2

Query: 369 INVQRLKEYRARLILFPKGKKVLK--GEANEEERKLATQLRGPLMPV 235
           + ++R+K+Y      F + ++ LK   E NEEER     LRG  M V
Sbjct: 62  LKLERIKDYLMMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSV 108


>AY121640-1|AAM51967.1|  949|Drosophila melanogaster LD04710p
           protein.
          Length = 949

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -2

Query: 180 FKAYQYLRGARSIAKL--VGIRAKRLKDAAENPDDVTKAPTAVKETKP 43
           + +Y YL    S+A L  VG+    +    +N +DVT+ P    ET P
Sbjct: 172 YASYLYLMAPISLAILNPVGLVLMEISKIIKNKEDVTRNPPLCPETCP 219


>AY118588-1|AAM49957.1|  343|Drosophila melanogaster LD44987p
           protein.
          Length = 343

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
 Frame = -2

Query: 417 IAVDPRRRNKSVESLQINVQRLKEYRARLILFPKGKKVLKGEANEEER---KLATQLRGP 247
           I +D  R  K+ E+L    +R+K+ R +L +FP+G +   G  +  ++    +A   + P
Sbjct: 144 IFIDRVRGEKARETLNDVNRRIKKQRIKLWVFPEGTRRNTGALHPFKKGAFHMAIDQQIP 203

Query: 246 LMPV 235
           ++PV
Sbjct: 204 ILPV 207


>AY058759-1|AAL13988.1|  439|Drosophila melanogaster SD02658p
           protein.
          Length = 439

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -2

Query: 369 INVQRLKEYRARLILFPKGKKVLK--GEANEEERKLATQLRGPLMPV 235
           + ++R+K+Y      F + ++ LK   E NEEER     LRG  M V
Sbjct: 62  LKLERIKDYLMMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSV 108


>AY058722-1|AAL13951.1|  376|Drosophila melanogaster LD46483p
           protein.
          Length = 376

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -2

Query: 159 RGARSIAKLVGIRAKRLKDAAENPDDVTKAPTAVKETKP 43
           +G  ++ K    +AK +K  +E+PDDV  A     +T P
Sbjct: 174 KGESALGKAKKTKAKPVKRQSEDPDDVPLAKVKRAQTPP 212


>AE014298-1811|AAN09316.1|  343|Drosophila melanogaster CG3812-PB,
           isoform B protein.
          Length = 343

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
 Frame = -2

Query: 417 IAVDPRRRNKSVESLQINVQRLKEYRARLILFPKGKKVLKGEANEEER---KLATQLRGP 247
           I +D  R  K+ E+L    +R+K+ R +L +FP+G +   G  +  ++    +A   + P
Sbjct: 144 IFIDRVRGEKARETLNDVNRRIKKQRIKLWVFPEGTRRNTGALHPFKKGAFHMAIDQQIP 203

Query: 246 LMPV 235
           ++PV
Sbjct: 204 ILPV 207


>AE014298-1810|AAF48201.1|  343|Drosophila melanogaster CG3812-PA,
           isoform A protein.
          Length = 343

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
 Frame = -2

Query: 417 IAVDPRRRNKSVESLQINVQRLKEYRARLILFPKGKKVLKGEANEEER---KLATQLRGP 247
           I +D  R  K+ E+L    +R+K+ R +L +FP+G +   G  +  ++    +A   + P
Sbjct: 144 IFIDRVRGEKARETLNDVNRRIKKQRIKLWVFPEGTRRNTGALHPFKKGAFHMAIDQQIP 203

Query: 246 LMPV 235
           ++PV
Sbjct: 204 ILPV 207


>AE014297-3409|AAF56205.1|  439|Drosophila melanogaster CG5289-PA
           protein.
          Length = 439

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -2

Query: 369 INVQRLKEYRARLILFPKGKKVLK--GEANEEERKLATQLRGPLMPV 235
           + ++R+K+Y      F + ++ LK   E NEEER     LRG  M V
Sbjct: 62  LKLERIKDYLMMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSV 108


>AE014296-2938|AAF49321.2|  949|Drosophila melanogaster CG7510-PA
           protein.
          Length = 949

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -2

Query: 180 FKAYQYLRGARSIAKL--VGIRAKRLKDAAENPDDVTKAPTAVKETKP 43
           + +Y YL    S+A L  VG+    +    +N +DVT+ P    ET P
Sbjct: 172 YASYLYLMAPISLAILNPVGLVLMEISKIIKNKEDVTRNPPLCPETCP 219


>AE013599-3141|AAF46682.1|  376|Drosophila melanogaster CG9418-PA
           protein.
          Length = 376

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -2

Query: 159 RGARSIAKLVGIRAKRLKDAAENPDDVTKAPTAVKETKP 43
           +G  ++ K    +AK +K  +E+PDDV  A     +T P
Sbjct: 174 KGESALGKAKKTKAKPVKRQSEDPDDVPLAKVKRAQTPP 212


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,539,123
Number of Sequences: 53049
Number of extensions: 339538
Number of successful extensions: 1023
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1438687674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -