Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_K06
(502 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 191 3e-49
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 177 4e-45
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 150 5e-37
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 137 5e-33
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 135 2e-32
08_01_0397 - 3509186-3510291,3510322-3512335 133 9e-32
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 132 2e-31
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 130 6e-31
03_05_0865 - 28365430-28367640 106 9e-24
06_03_1255 + 28780181-28781172,28782065-28782932 103 6e-23
02_01_0381 - 2764331-2764342,2768966-2769907 102 1e-22
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 94 5e-20
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 92 3e-19
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 91 3e-19
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 89 2e-18
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 86 2e-17
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 85 4e-17
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 83 9e-17
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 83 2e-16
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 74 7e-14
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 73 2e-13
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 72 2e-13
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 72 3e-13
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 71 4e-13
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 71 7e-13
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332... 69 2e-12
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 68 5e-12
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638... 67 9e-12
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 66 1e-11
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 66 2e-11
01_07_0333 - 42813789-42814073,42814229-42814315,42815083-428151... 65 3e-11
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 65 3e-11
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 63 1e-10
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954... 63 1e-10
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 62 2e-10
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 61 4e-10
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 61 4e-10
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 61 6e-10
02_05_1293 - 35520733-35520963,35521696-35521878,35522040-355222... 61 6e-10
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225... 59 2e-09
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 59 2e-09
03_06_0531 + 34552206-34552598,34552665-34552735,34553363-345533... 57 7e-09
03_02_0189 - 6253659-6255380 57 7e-09
02_05_0064 - 25529630-25531440,25531663-25531673,25533113-255331... 57 9e-09
01_06_0020 + 25630728-25631023,25631308-25631548,25631629-256317... 53 1e-07
06_03_1284 - 28988287-28988922,28989335-28989765,28989850-289899... 52 3e-07
03_05_0052 - 20293197-20293310,20293938-20294024,20294133-202942... 51 5e-07
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 50 1e-06
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 50 1e-06
03_01_0399 + 3097878-3098141,3098254-3098547,3098659-3098886,309... 49 2e-06
02_01_0355 + 2558792-2558862,2558993-2559099,2559185-2559615,256... 48 3e-06
09_03_0167 + 12965030-12965356,12966100-12966387,12966704-129668... 46 2e-05
02_01_0091 + 646299-649082 42 4e-04
02_05_1067 - 33858215-33858321,33858422-33858527,33859014-338592... 41 5e-04
01_05_0296 + 20567259-20567386,20568895-20569123,20569205-205694... 40 8e-04
01_05_0295 + 20537147-20537291,20539111-20539283,20539365-205395... 38 0.006
10_08_0429 + 17845303-17845431,17845508-17845684,17845782-178458... 36 0.018
11_08_0102 - 28354880-28355056,28355159-28355376,28355634-283557... 33 0.13
11_06_0691 - 26315738-26315848,26315939-26316163,26316249-263166... 32 0.23
03_02_0143 - 5888005-5888088,5888818-5888949,5889485-5889634,589... 30 1.2
01_06_1742 - 39585879-39585994,39586089-39586238,39586288-395863... 30 1.2
03_05_0589 + 25919965-25920331,25920461-25920780 29 1.6
09_02_0405 - 8597807-8598045,8599218-8599284,8599571-8599636,859... 29 2.1
04_01_0567 - 7263744-7263922,7264020-7264259,7264919-7264982,726... 29 2.1
03_05_0155 - 21307001-21307239,21308217-21308320,21308564-213087... 29 2.1
05_05_0174 - 22960732-22960815,22960907-22961419,22961576-229620... 29 2.8
01_07_0192 - 41888998-41890632 29 2.8
01_01_0103 - 773727-774737,774797-774813,774852-775078,777465-77... 29 2.8
01_05_0592 - 23483834-23484285,23484357-23484455,23484534-234847... 28 4.8
01_01_0118 - 871481-872606,872795-872950,873051-873817 28 4.8
01_01_0114 - 851249-852372,852577-852740,852838-853568 28 4.8
10_01_0003 + 46158-46428,46588-46706,46819-46928,48977-49415,495... 27 8.5
08_01_0117 + 941334-941339,941720-941906,942444-942565,942648-94... 27 8.5
05_04_0123 + 18210069-18213737 27 8.5
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 191 bits (465), Expect = 3e-49
Identities = 84/157 (53%), Positives = 114/157 (72%)
Frame = +2
Query: 32 PNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPD 211
P D SL PF K+FY +V S +V YR + ++TV G +VP P+ +F+EANFPD
Sbjct: 106 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 165
Query: 212 YVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPPIR 391
Y QAI G+ +PTPIQ+QGWP+A+ G++++G+AQTGSGKTL+Y+LP +VH+ QP +
Sbjct: 166 YCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLE 225
Query: 392 RGDGPIALVLAPTRELAQQIQQVASEFGHSSYVRNTC 502
+GDGPI L+LAPTRELA QIQQ + +FG S R+TC
Sbjct: 226 QGDGPIVLILAPTRELAVQIQQESGKFGSYSRTRSTC 262
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 177 bits (431), Expect = 4e-45
Identities = 80/141 (56%), Positives = 103/141 (73%)
Frame = +2
Query: 53 LQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIK 232
L F K+FY SV + EVE YR + E+TV G +VP P+ F + FP+YV Q I
Sbjct: 48 LPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEIT 107
Query: 233 SMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPPIRRGDGPIA 412
G+ +PTPIQ+QGWP+A+ G++L+G+A+TGSGKTLAY+LPAIVH+ QP + GDGPI
Sbjct: 108 KAGFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIV 167
Query: 413 LVLAPTRELAQQIQQVASEFG 475
LVLAPTRELA QIQQ A++FG
Sbjct: 168 LVLAPTRELAVQIQQEATKFG 188
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 150 bits (364), Expect = 5e-37
Identities = 69/143 (48%), Positives = 93/143 (65%)
Frame = +2
Query: 44 SLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQ 223
++ +PFNKDFY SV S EV DY + VSG +VP PI+ F + FP +
Sbjct: 173 TIEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMN 232
Query: 224 AIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPPIRRGDG 403
AI GY+ PT IQ Q PI +SG++++G+A+TGSGKT A++LP IVHI +QP + + +G
Sbjct: 233 AIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEG 292
Query: 404 PIALVLAPTRELAQQIQQVASEF 472
PI +V APTRELA QI A +F
Sbjct: 293 PIGVVCAPTRELAHQIYLEAKKF 315
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 137 bits (331), Expect = 5e-33
Identities = 63/145 (43%), Positives = 91/145 (62%)
Frame = +2
Query: 47 LSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQA 226
+ QPF K+ Y K + + EV YR E+ V G +VP PI+ + ++ +
Sbjct: 240 IEYQPFRKNLYIEVKDITMMTGEEVATYRKNLELKVHGKDVPKPIKTWVQSGLTSKLLDT 299
Query: 227 IKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPPIRRGDGP 406
IK +G++ P PIQAQ PI MSG++ +G+A+TGSGKTLA++LP + H+ +QPP+ GDGP
Sbjct: 300 IKKLGFEKPMPIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPPVVPGDGP 359
Query: 407 IALVLAPTRELAQQIQQVASEFGHS 481
I L++APTREL QI +F S
Sbjct: 360 IGLIMAPTRELVVQIHSDIKKFAKS 384
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 135 bits (326), Expect = 2e-32
Identities = 65/127 (51%), Positives = 84/127 (66%)
Frame = +2
Query: 122 EDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKN 301
E YR++HE+TV G VP PI FE FP + + I+ G+ PTPIQAQ WPIA+ ++
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQD 189
Query: 302 LVGVAQTGSGKTLAYILPAIVHITNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGHS 481
+V +A+TGSGKTL Y+LP +HI R GP LVLAPTRELA QI + A +FG S
Sbjct: 190 VVAIAKTGSGKTLGYLLPGFMHIKRLQNNPR-SGPTVLVLAPTRELATQILEEAVKFGRS 248
Query: 482 SYVRNTC 502
S + +TC
Sbjct: 249 SRISSTC 255
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 133 bits (321), Expect = 9e-32
Identities = 61/142 (42%), Positives = 90/142 (63%)
Frame = +2
Query: 47 LSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQA 226
+ QPF K+FY K + + EV YR + E+ V G +VP PI+ + ++ +
Sbjct: 379 IDYQPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSKLLDT 438
Query: 227 IKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPPIRRGDGP 406
IK +G++ P IQAQ PI MSG++ +G+A+TGSGKTLA++LP + H+ +QP + GDGP
Sbjct: 439 IKKLGFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPAVVPGDGP 498
Query: 407 IALVLAPTRELAQQIQQVASEF 472
I L++APTREL QI +F
Sbjct: 499 IGLIMAPTRELVVQIHSDIKKF 520
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 132 bits (318), Expect = 2e-31
Identities = 65/128 (50%), Positives = 82/128 (64%), Gaps = 3/128 (2%)
Frame = +2
Query: 128 YRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLV 307
YR HEVT G VP P FE FP + Q I + G+ +PTPIQAQ WP+A+ +++V
Sbjct: 586 YRQHHEVTAVGENVPPPFMTFEATGFPPEILQEIHAAGFLNPTPIQAQTWPVALQNRDIV 645
Query: 308 GVAQTGSGKTLAYILPAIVHI---TNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGH 478
+A+TGSGKTL Y++PA +H+ N P + GP LVLAPTRELA QIQ A +FG
Sbjct: 646 AIAKTGSGKTLGYLIPAFIHLRRYQNNPML----GPTVLVLAPTRELASQIQDEAVKFGR 701
Query: 479 SSYVRNTC 502
SS V TC
Sbjct: 702 SSRVSCTC 709
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 130 bits (314), Expect = 6e-31
Identities = 60/127 (47%), Positives = 81/127 (63%)
Frame = +2
Query: 122 EDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKN 301
E YR KHE+T+ G E P P F+ FP + + ++ G+ PTPIQAQ WPIA+ ++
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNRD 219
Query: 302 LVGVAQTGSGKTLAYILPAIVHITNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGHS 481
+V VA+TGSGKTL Y++P + + R DGP LVL+PTRELA QIQ A +FG S
Sbjct: 220 IVAVAKTGSGKTLGYLIPGFILLKRLQHNSR-DGPTVLVLSPTRELATQIQDEAKKFGRS 278
Query: 482 SYVRNTC 502
S + + C
Sbjct: 279 SRISSVC 285
>03_05_0865 - 28365430-28367640
Length = 736
Score = 106 bits (255), Expect = 9e-24
Identities = 48/131 (36%), Positives = 83/131 (63%), Gaps = 3/131 (2%)
Frame = +2
Query: 89 KSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQA 268
KS+ + + + +R ++ G +VP P+ + E+ + +A++ GYK+P+PIQ
Sbjct: 284 KSLDEMTERDWRIFREDFNISYKGSKVPRPMRKWSESKLGTELLRAVEKAGYKEPSPIQM 343
Query: 269 QGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPPI---RRGDGPIALVLAPTREL 439
P+ + ++++G+A+TGSGKT A++LP + +IT PPI +GP A+V+APTREL
Sbjct: 344 ASIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTREL 403
Query: 440 AQQIQQVASEF 472
AQQI++ +F
Sbjct: 404 AQQIEEETVKF 414
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 103 bits (248), Expect = 6e-23
Identities = 51/129 (39%), Positives = 77/129 (59%), Gaps = 4/129 (3%)
Frame = +2
Query: 98 LDRSPYEVED-YRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQG 274
L R P D R + V G +VP P F + P+ + +A++ G + PTPIQ QG
Sbjct: 144 LRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQVQG 203
Query: 275 WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHITNQP---PIRRGDGPIALVLAPTRELAQ 445
P+A+SG++++G+A TGSGKTL ++LP I+ + PI G+GP L++ P+RELA+
Sbjct: 204 LPVALSGRDMIGIAFTGSGKTLVFVLPLIMAALQEEILMPIVPGEGPFGLIVCPSRELAR 263
Query: 446 QIQQVASEF 472
Q +V F
Sbjct: 264 QTHEVIEMF 272
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 102 bits (245), Expect = 1e-22
Identities = 45/122 (36%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Frame = +2
Query: 116 EVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSG 295
+ ++ R K + V G +VP P F + P+ + + ++ G PTPIQ QG P+ +SG
Sbjct: 160 KADELRRKWHILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSG 219
Query: 296 KNLVGVAQTGSGKTLAYILPAIVHITNQP---PIRRGDGPIALVLAPTRELAQQIQQVAS 466
++++G+A TGSGKTL ++LP I+ + PI G+GP +++ P+RELA+Q V
Sbjct: 220 RDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIE 279
Query: 467 EF 472
+F
Sbjct: 280 QF 281
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 94.3 bits (224), Expect = 5e-20
Identities = 60/170 (35%), Positives = 89/170 (52%), Gaps = 9/170 (5%)
Frame = +2
Query: 11 GGQNMRRPNWDSLSLQP---FNKDFYNPHKSVLDRSPYEVE-DYRNKHEVTVSGVEVPNP 178
GG N R P WD +P N + + D + + D V SG +VP P
Sbjct: 177 GGWNSR-PGWDRRDREPNPFANSEAEEATEVDFDTANTGINFDAYEDIPVETSGHDVPPP 235
Query: 179 IEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 358
+ F E + D + + I+ Y PTP+Q PI+++G++L+ AQTGSGKT A+ P
Sbjct: 236 VNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPI 295
Query: 359 IVHITNQPPIRRGDG-----PIALVLAPTRELAQQIQQVASEFGHSSYVR 493
I I + P +R G P+AL+L+PTREL+ QI + A +F + + VR
Sbjct: 296 ISGIMSSRPPQRPRGSRTAYPLALILSPTRELSVQIHEEARKFAYQTGVR 345
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 91.9 bits (218), Expect = 3e-19
Identities = 45/122 (36%), Positives = 75/122 (61%), Gaps = 2/122 (1%)
Frame = +2
Query: 116 EVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSG 295
++ R+K ++ V G +VP+PI F + P+ + +++ GY PTP+Q Q P ++
Sbjct: 160 QIASLRSKLDICVKGEDVPDPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICN 219
Query: 296 KNLVGVAQTGSGKTLAYILPAIVHITNQPPIRRGD--GPIALVLAPTRELAQQIQQVASE 469
++L+ A TGSGKT ++++P I H ++ R D GP+A+VLAPTREL Q+++ A
Sbjct: 220 RSLLVSADTGSGKTASFLVPIIAHCSHVRSERCTDKQGPLAIVLAPTRELCLQVEEQAKV 279
Query: 470 FG 475
G
Sbjct: 280 LG 281
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 91.5 bits (217), Expect = 3e-19
Identities = 60/170 (35%), Positives = 88/170 (51%), Gaps = 9/170 (5%)
Frame = +2
Query: 11 GGQNMRRPNWDSLSLQPFNKDFYNPHKSVLD----RSPYEVEDYRNKHEVTVSGVEVPNP 178
G N R WD +P F N + +D + E Y + V SG +VP P
Sbjct: 265 GAWNSRPGGWDRRDREP--DPFANSEAAEVDFEGENTGINFEAYEDI-PVETSGHDVPPP 321
Query: 179 IEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 358
F E + D + + I+ Y PTP+Q PI+++G++L+ AQTGSGKT A+ P
Sbjct: 322 ANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPI 381
Query: 359 IVHI--TNQPPIRRGDG---PIALVLAPTRELAQQIQQVASEFGHSSYVR 493
I I + PP RG P+AL+L+PTREL+ QI + A +F + + V+
Sbjct: 382 ISGIMRSRPPPRSRGSRTAYPLALILSPTRELSVQIHEEARKFAYQTGVK 431
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 89.0 bits (211), Expect = 2e-18
Identities = 49/123 (39%), Positives = 70/123 (56%), Gaps = 7/123 (5%)
Frame = +2
Query: 146 VTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTG 325
V SG EVP P+ F E + + I+ Y PTP+Q PI+++G++L+ AQTG
Sbjct: 143 VETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLMACAQTG 202
Query: 326 SGKTLAYILPAIVHITNQPPIRRGDG-------PIALVLAPTRELAQQIQQVASEFGHSS 484
SGKT A+ P I I PP +R P+AL+L+PTREL+ QI + A +F + +
Sbjct: 203 SGKTAAFCFPIISGIMRGPPAQRPQRGGMRTACPLALILSPTRELSMQIHEEARKFSYQT 262
Query: 485 YVR 493
VR
Sbjct: 263 GVR 265
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 85.8 bits (203), Expect = 2e-17
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 3/112 (2%)
Frame = +2
Query: 176 PIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 355
P+ F P V K G++ P+PIQA WP + G++ +G+A TGSGKT+A+ +P
Sbjct: 92 PLSSFAATALPPQVLDCCK--GFERPSPIQAYAWPYLLDGRDFIGIAATGSGKTIAFGVP 149
Query: 356 AIVHI---TNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGHSSYVRNTC 502
A++H+ + ++G P LVL+PTRELAQQI V E G + + C
Sbjct: 150 ALMHVRRKMGEKSAKKG-VPRVLVLSPTRELAQQIADVLCEAGAPCGISSVC 200
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 84.6 bits (200), Expect = 4e-17
Identities = 47/127 (37%), Positives = 73/127 (57%), Gaps = 6/127 (4%)
Frame = +2
Query: 131 RNKHEVTVSGVEVPNPIEHFEEA----NFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGK 298
R K ++ +SG VP P+E+FEE Y+ + +G+++PTPIQ Q PI +SG+
Sbjct: 125 RKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGR 184
Query: 299 NLVGVAQTGSGKTLAYILPAIVHITNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF-- 472
A TGSGKTLA++ P ++ I +P + +G A++L PTRELA Q + +
Sbjct: 185 ECFACAPTGSGKTLAFLFPILMKI--KPGSK--EGVKAVILCPTRELAAQTTRECKKLAK 240
Query: 473 GHSSYVR 493
G Y++
Sbjct: 241 GRKFYIK 247
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 83.4 bits (197), Expect = 9e-17
Identities = 42/83 (50%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Frame = +2
Query: 236 MGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI--TNQPPIRRGDGPI 409
MG++ PT IQAQ P+AMSG++++ A TG+GKTLAY+ P IVH+ +P + R DG
Sbjct: 42 MGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAP-IVHLLQMREPRVERTDGTF 100
Query: 410 ALVLAPTRELAQQIQQVASEFGH 478
ALVL PTREL Q+ +A + H
Sbjct: 101 ALVLVPTRELCLQVYGIAQQLVH 123
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 82.6 bits (195), Expect = 2e-16
Identities = 49/112 (43%), Positives = 62/112 (55%), Gaps = 11/112 (9%)
Frame = +2
Query: 146 VTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTG 325
V VSG +VP P + FE A + V + + GY+ PTP+Q PIA++G++L+ AQTG
Sbjct: 72 VEVSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGRDLMACAQTG 131
Query: 326 SGKTLAYILP-----------AIVHITNQPPIRRGDGPIALVLAPTRELAQQ 448
SGKT A+ LP I H R P ALVLAPTRELA Q
Sbjct: 132 SGKTAAFCLPVVSGLVAAGGSGIGHRERSSFNRAAAKPRALVLAPTRELAAQ 183
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 73.7 bits (173), Expect = 7e-14
Identities = 38/102 (37%), Positives = 61/102 (59%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
F E N + +A +++GY+ PTPIQA P+A++G+++ G A TGSGKT A+ LP +
Sbjct: 196 FLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVLER 255
Query: 368 ITNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGHSSYVR 493
+ +P +R L+L PTRELA Q+ + + + +R
Sbjct: 256 LLFRP--KRVPAIRVLILTPTRELAAQVHSMIEKLAQFTDIR 295
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 72.5 bits (170), Expect = 2e-13
Identities = 46/125 (36%), Positives = 67/125 (53%), Gaps = 5/125 (4%)
Frame = +2
Query: 116 EVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSG 295
E E+ ++ E+T SG E P + + + +KS G K PIQA + + + G
Sbjct: 82 EEEEDDDEGELTASGDEDPADPNALANFRISESLREKLKSKGIKALFPIQATTFDLVLDG 141
Query: 296 KNLVGVAQTGSGKTLAYILPAIVHITN--QPPIRR---GDGPIALVLAPTRELAQQIQQV 460
+LVG A+TG GKTLA++LP + + N RR G P LVL PTRELA+Q+
Sbjct: 142 HDLVGRARTGQGKTLAFVLPILESLVNGTHKASRRTDYGRPPTVLVLLPTRELAKQVHTD 201
Query: 461 ASEFG 475
+ +G
Sbjct: 202 FAFYG 206
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 72.1 bits (169), Expect = 2e-13
Identities = 35/96 (36%), Positives = 57/96 (59%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
FE + V + ++ GY+ PTPIQ + P+ ++G ++ +A+TGSGKT A+++P I
Sbjct: 28 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQR 87
Query: 368 ITNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFG 475
+ G G AL+L+PTR+LA Q + A + G
Sbjct: 88 LRRHD---AGAGIRALILSPTRDLATQTLKFAQQLG 120
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 71.7 bits (168), Expect = 3e-13
Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI-- 361
F E + +AI+ M Y T IQA+ P ++GK+++G A+TGSGKTLA+++PAI
Sbjct: 98 FSELGVSEPTARAIREMNYTYLTQIQARSIPHLLNGKDVMGAAKTGSGKTLAFLIPAIEM 157
Query: 362 VHITNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 469
+H + P R G G +V+ PTRELA Q VA E
Sbjct: 158 LHHAHFMP-RNGTG--VVVVCPTRELAIQTHNVAKE 190
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 71.3 bits (167), Expect = 4e-13
Identities = 41/96 (42%), Positives = 55/96 (57%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
F E + A +MG+K+PT IQA+ P A+ G++L+G+ QTGSGKT A+ LP I
Sbjct: 43 FAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALPIIQA 102
Query: 368 ITNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFG 475
+ Q + A VL+PTRELA QI Q G
Sbjct: 103 LLKQD---KPQALFACVLSPTRELAFQIGQQFEALG 135
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 70.5 bits (165), Expect = 7e-13
Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP---A 358
F+E + + +A++ G TPIQ + P+ + GK++V A+TGSGKT AY+LP
Sbjct: 85 FDELGLDEQLKRALRKKGLDKATPIQREAIPLILEGKDVVAKAKTGSGKTFAYLLPMLHE 144
Query: 359 IVHITNQPPIRRGDGPIALVLAPTRELAQQIQQVAS 466
++ ++ + IR+ P +L PTREL QQ+ AS
Sbjct: 145 LLKLSAEGRIRK-SAPNVFILVPTRELCQQVHNEAS 179
>01_01_0447 -
3327727-3328144,3328438-3328688,3328820-3328909,
3329061-3329159,3329240-3329353,3329450-3329555,
3329661-3329740,3329913-3330173,3330271-3330507,
3330635-3330922
Length = 647
Score = 68.9 bits (161), Expect = 2e-12
Identities = 32/86 (37%), Positives = 54/86 (62%)
Frame = +2
Query: 215 VCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPPIRR 394
V +A+K G++ TP+QA P+ +S K++ A TGSGKTLA+++P + + +P +
Sbjct: 34 VVKALKGGGFRRCTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPVVEILRRRPSPPK 93
Query: 395 GDGPIALVLAPTRELAQQIQQVASEF 472
+ ++++PTREL+ QI VA F
Sbjct: 94 PHEVLGIIISPTRELSSQIYNVAQPF 119
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 67.7 bits (158), Expect = 5e-12
Identities = 36/90 (40%), Positives = 54/90 (60%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
F E ++ S+G + PT +Q + P A+ G++++G+A+TGSGKT A+ LP I+H
Sbjct: 79 FAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALP-ILH 137
Query: 368 ITNQPPIRRGDGPIALVLAPTRELAQQIQQ 457
+ P G AL LAPTRELA Q+ +
Sbjct: 138 RLGEDPY----GVAALALAPTRELAAQLAE 163
>12_02_1076 -
25862671-25863159,25863290-25863451,25863614-25863838,
25863939-25864037,25864584-25864992,25865094-25865221,
25865955-25866329
Length = 628
Score = 66.9 bits (156), Expect = 9e-12
Identities = 49/127 (38%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Frame = +2
Query: 134 NKHEVTVSGVEVPNPIEHFEEANF---PDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNL 304
+K GV E E A P V Q + S G PIQ AM GK++
Sbjct: 80 DKRGAKAGGVAAGGAEEGLEVAKLGISPKIVSQ-LASRGITKLFPIQRAVLEPAMQGKDM 138
Query: 305 VGVAQTGSGKTLAYILPAI-VHITNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGHS 481
VG A+TG+GKTLA+ +P + I + G P+A+VLAPTRELA+Q+++ EF S
Sbjct: 139 VGRAKTGTGKTLAFGIPILDAIIRHNEKNSPGKFPLAIVLAPTRELAKQVER---EFSDS 195
Query: 482 SYVRNTC 502
S V C
Sbjct: 196 SNVETIC 202
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 66.5 bits (155), Expect = 1e-11
Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
F + D AI+ M Y T IQA+ P M G +++ A+TGSGKTLA+++PAI
Sbjct: 88 FSDLPISDLTANAIRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAIEL 147
Query: 368 ITN-QPPIRRGDGPIALVLAPTRELAQQIQQVASE 469
+ + R G G +VL PTRELA Q VA E
Sbjct: 148 LCRLRFSPRNGTG--VIVLCPTRELAIQTHNVAKE 180
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 65.7 bits (153), Expect = 2e-11
Identities = 46/132 (34%), Positives = 66/132 (50%), Gaps = 25/132 (18%)
Frame = +2
Query: 179 IEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 358
++ FEE + V A+ MG PT IQ G P ++G ++V + TGSGKTLAY+LP
Sbjct: 109 VDSFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPL 168
Query: 359 I-VHI--------------TNQPPIRRGDG----------PIALVLAPTRELAQQIQQVA 463
+ + I NQ +RR + P A+VL PTREL +Q+ +VA
Sbjct: 169 VQIEIENTYRLLPINNGVPANQKLLRRDEAMLGMSMKPRRPRAVVLCPTRELTEQVFRVA 228
Query: 464 SEFGHSSYVRNT 499
H + R+T
Sbjct: 229 KSISHHARFRST 240
>01_07_0333 -
42813789-42814073,42814229-42814315,42815083-42815172,
42815555-42815623,42815859-42815888,42816060-42816164,
42816454-42816549,42816647-42816760,42816862-42816955,
42817027-42817190
Length = 377
Score = 65.3 bits (152), Expect = 3e-11
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +2
Query: 206 PDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPP 385
P++V Q + +GY PT +Q Q P+ +SG++ + AQTGSGKTLAY+L
Sbjct: 49 PEHVLQRAEEVGYVVPTEVQEQSLPVLLSGQDCILHAQTGSGKTLAYLLSVF------SA 102
Query: 386 IRRGDGPI-ALVLAPTRELAQQIQQVA 463
I G + ALV+ PTREL Q+ +VA
Sbjct: 103 IDFGRSSVQALVVVPTRELGMQVTKVA 129
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 64.9 bits (151), Expect = 3e-11
Identities = 39/82 (47%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = +2
Query: 236 MGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPPIRRGDGP--I 409
MG+K PT IQA+ P A+ G++++GV QTGSGKT A+ LP I Q + P
Sbjct: 1 MGWKAPTRIQAEVIPFALQGRDVIGVGQTGSGKTAAFALPII-----QALLEHEHRPCFF 55
Query: 410 ALVLAPTRELAQQIQQVASEFG 475
A VLAPTRELA QI + G
Sbjct: 56 ACVLAPTRELAIQIAKQFEALG 77
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 62.9 bits (146), Expect = 1e-10
Identities = 33/88 (37%), Positives = 52/88 (59%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
F++ +AIK GY+ T +Q PI + G++++ A+TG+GKT+A++LPAI
Sbjct: 76 FDQCPVSPLSLKAIKDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLLPAIEL 135
Query: 368 ITNQPPIRRGDGPIALVLAPTRELAQQI 451
++ P R LV+ PTRELA Q+
Sbjct: 136 LSTLP---RSPSINLLVICPTRELANQV 160
>01_05_0721 +
24594815-24594834,24595207-24595313,24595417-24595472,
24595562-24595810,24595871-24596077,24596157-24596243,
24596331-24596426,24596500-24596715,24596908-24597090,
24597222-24597449
Length = 482
Score = 62.9 bits (146), Expect = 1e-10
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
F++ +A+K GY+ T +Q P+ + GK+++ A+TG+GKT+A++LPAI
Sbjct: 8 FDQCTISPLSLKAVKDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFLLPAIEV 67
Query: 368 ITNQPPIRRGD---GPIALVLAPTRELAQQI 451
++ P RR LV+ PTRELA Q+
Sbjct: 68 LSALPNSRRDQLRPSINLLVMCPTRELAIQV 98
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 62.1 bits (144), Expect = 2e-10
Identities = 33/96 (34%), Positives = 53/96 (55%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
FE+ + I G++ P+PIQ + PIA++G +++ A+ G+GKT A+ +PA+
Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 195
Query: 368 ITNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFG 475
I + + ++L PTRELA Q QV E G
Sbjct: 196 IDQEK-----NAIQVVILVPTRELALQTSQVCKELG 226
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 61.3 bits (142), Expect = 4e-10
Identities = 33/96 (34%), Positives = 53/96 (55%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
FE+ + I G++ P+PIQ + PIA++G +++ A+ G+GKT A+ +PA+
Sbjct: 149 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
Query: 368 ITNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFG 475
I + + ++L PTRELA Q QV E G
Sbjct: 209 IDPEK-----NAIQVVILVPTRELALQTSQVCKELG 239
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 61.3 bits (142), Expect = 4e-10
Identities = 33/96 (34%), Positives = 52/96 (54%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
FE+ + I G++ P+PIQ + PIA++G +++ A+ G+GKT A+ +PA+
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 185
Query: 368 ITNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFG 475
I + ++L PTRELA Q QV E G
Sbjct: 186 IDQDK-----NAIQVVILVPTRELALQTSQVCKELG 216
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 60.9 bits (141), Expect = 6e-10
Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 16/92 (17%)
Frame = +2
Query: 224 AIKSMGYKDPTPIQAQGWPIAM-SGKNLVGVAQTGSGKTLAYILPAIVHITNQPP----I 388
A++ +G+K+PTPIQ +P A GK+++G A+TGSGKTLA+ LP + + + +
Sbjct: 156 AVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEQEKAMRL 215
Query: 389 RRGD----------GPI-ALVLAPTRELAQQI 451
R D P+ AL+L PTRELA+Q+
Sbjct: 216 SREDESTQDENSRESPLRALILTPTRELAKQV 247
>02_05_1293 -
35520733-35520963,35521696-35521878,35522040-35522255,
35522936-35523022,35523125-35523331,35523426-35523650,
35523743-35523798,35524009-35524115,35524443-35525470
Length = 779
Score = 60.9 bits (141), Expect = 6e-10
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Frame = +2
Query: 182 EHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 361
+ FEE +A+ GY T +Q P+ + GK+++ A+TG+GK+ A++LPAI
Sbjct: 342 KRFEECGISPLTVKALTDAGYVQTTVVQETALPMCLEGKDVLVKAKTGTGKSAAFLLPAI 401
Query: 362 VHITN--QPPIRRGDGPI-ALVLAPTRELAQQIQQVAS 466
+ N + PI +L+L PTRELA Q+ A+
Sbjct: 402 ESVLNAMKSHTNHRVSPIFSLILCPTRELAIQLTAEAN 439
>07_01_0322 -
2258067-2258519,2258620-2258781,2258896-2259159,
2259196-2259294,2259723-2260131,2260223-2260350,
2261115-2261181,2262766-2262838,2262911-2263130
Length = 624
Score = 59.3 bits (137), Expect = 2e-09
Identities = 32/75 (42%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Frame = +2
Query: 284 AMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPPIRRGDG--PIALVLAPTRELAQQIQQ 457
AM GK+++G A+TG+GKTLA+ +P + I + G G P+A++LAPTRELA+Q+++
Sbjct: 127 AMQGKDMIGRARTGTGKTLAFGIPIMDRILRHNE-KNGSGRNPLAIILAPTRELARQVEK 185
Query: 458 VASEFGHSSYVRNTC 502
EF S+ + + C
Sbjct: 186 ---EFKESAPLDSLC 197
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 58.8 bits (136), Expect = 2e-09
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
F+E D + A++S G+ P+ IQA + + GK+ + Q+GSGKTLAY+ P + +
Sbjct: 242 FKEIGCSDEILGALRSFGFPRPSHIQAMAYRPVLEGKSCIIGDQSGSGKTLAYLCPVVQN 301
Query: 368 ITNQ--PPIRRGD--GPIALVLAPTRELAQQI 451
+ + + R P +VL PT ELA Q+
Sbjct: 302 LRKEEVEGLHRSSPRNPRVVVLTPTAELASQV 333
>03_06_0531 +
34552206-34552598,34552665-34552735,34553363-34553369,
34553603-34553736,34553834-34554245,34554655-34554753,
34555059-34555283,34555652-34556029,34556412-34556555,
34556832-34556927,34557228-34557547,34557965-34558040
Length = 784
Score = 57.2 bits (132), Expect = 7e-09
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Frame = +2
Query: 284 AMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPP---IRRGDGPIALVLAPTRELAQQIQ 454
A+ G++L+ A+TG+GKTLA+ +P I + + +RRG P LVLAPTRELA+Q++
Sbjct: 164 ALDGRDLIARAKTGTGKTLAFGIPMIKQLMEEDDGRSVRRGRIPRVLVLAPTRELAKQVE 223
Query: 455 QVASE 469
+ E
Sbjct: 224 KEIKE 228
>03_02_0189 - 6253659-6255380
Length = 573
Score = 57.2 bits (132), Expect = 7e-09
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
FEE P + + G PT +Q+ PI + V + TGSGKTLAY+LP +
Sbjct: 133 FEELGLPPLLIDRLNKEGLSTPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPILSE 192
Query: 368 I------TNQPPIRRGDGPIALVLAPTRELAQQI 451
I T Q + G A+++AP+REL QI
Sbjct: 193 IGPLKRPTEQDGSDKRSGVEAVIVAPSRELGMQI 226
>02_05_0064 -
25529630-25531440,25531663-25531673,25533113-25533198,
25533412-25534259,25535385-25535736
Length = 1035
Score = 56.8 bits (131), Expect = 9e-09
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
FEE P + + G PT +Q+ PI + V + TGSGKTLAY+LP +
Sbjct: 595 FEELGLPPLLIDRLNKEGLTAPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPILSE 654
Query: 368 I------TNQPPIRRGDGPIALVLAPTRELAQQI 451
I T Q + G A+++AP+REL QI
Sbjct: 655 IGPLKRPTEQDSSDKRSGVEAVIVAPSRELGMQI 688
>01_06_0020 +
25630728-25631023,25631308-25631548,25631629-25631709,
25632109-25632216,25632329-25632448,25632806-25632943,
25633064-25633150,25633802-25633915
Length = 394
Score = 52.8 bits (121), Expect = 1e-07
Identities = 40/124 (32%), Positives = 67/124 (54%)
Frame = +2
Query: 104 RSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPI 283
R P ++D E T GVEV I F++ D + + I + G++ P+ IQ +
Sbjct: 9 RGPGAMDDENLTFE-TSPGVEV---ISSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLP 64
Query: 284 AMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPPIRRGDGPIALVLAPTRELAQQIQQVA 463
+SG++++ AQ+G+GKT + I ++ I + +R AL+L+PTRELA Q ++V
Sbjct: 65 IISGRDVIAQAQSGTGKT-SMISLSVCQIVD-TAVREVQ---ALILSPTRELAAQTERVM 119
Query: 464 SEFG 475
G
Sbjct: 120 LAIG 123
>06_03_1284 -
28988287-28988922,28989335-28989765,28989850-28989956,
28990066-28990136
Length = 414
Score = 51.6 bits (118), Expect = 3e-07
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Frame = +2
Query: 83 PHKSVLDRSPYE--VEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPT 256
P S D Y+ +++ N+ E E F++ + + + I + G++ P+
Sbjct: 6 PEGSQFDAKHYDSKMQELLNQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFEKPS 65
Query: 257 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPPIRRGDGPIALVLAPTRE 436
IQ +G G +++ AQ+G+GKT A I+ + + ALVLAPTRE
Sbjct: 66 AIQQRGIVPFCKGLDVIQQAQSGTGKT-ATFCSGILQQLDYAVVECQ----ALVLAPTRE 120
Query: 437 LAQQIQQVASEFG 475
LAQQI++V G
Sbjct: 121 LAQQIEKVMRALG 133
>03_05_0052 -
20293197-20293310,20293938-20294024,20294133-20294270,
20295009-20295128,20295236-20295343,20296053-20296133,
20296216-20296456,20297010-20297305
Length = 394
Score = 51.2 bits (117), Expect = 5e-07
Identities = 39/124 (31%), Positives = 67/124 (54%)
Frame = +2
Query: 104 RSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPI 283
R P ++D E T GVEV I F++ + + + I + G++ P+ IQ +
Sbjct: 9 RGPGAMDDENLTFE-TSPGVEV---ISSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVLP 64
Query: 284 AMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPPIRRGDGPIALVLAPTRELAQQIQQVA 463
+SG++++ AQ+G+GKT + I ++ I + +R AL+L+PTRELA Q ++V
Sbjct: 65 IISGRDVIAQAQSGTGKT-SMISLSVCQIVD-TAVREVQ---ALILSPTRELAAQTERVM 119
Query: 464 SEFG 475
G
Sbjct: 120 LAIG 123
>07_03_0601 -
19872780-19873099,19873148-19873151,19874196-19874357,
19874429-19874617,19874687-19875010,19875103-19875378,
19875436-19875478,19876110-19876188,19876473-19876555,
19876708-19876782,19877324-19877490,19877960-19878370
Length = 710
Score = 49.6 bits (113), Expect = 1e-06
Identities = 20/59 (33%), Positives = 37/59 (62%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 364
F+E + ++ GY + + IQ P A+ G++++G A+TGSGKTLA+++P ++
Sbjct: 82 FDELPLSNKTKDGLRKAGYTEMSEIQRAALPHALCGRDVLGAAKTGSGKTLAFVIPVLM 140
>06_03_0287 -
19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 49.6 bits (113), Expect = 1e-06
Identities = 27/62 (43%), Positives = 43/62 (69%), Gaps = 3/62 (4%)
Frame = +2
Query: 293 GKNLVGVAQTGSGKTLAYILPAIVHITNQPPI--RRGDGPIA-LVLAPTRELAQQIQQVA 463
GK+++ A+TG+GKT+A++LPAI ++ PPI + PI+ +V+ PTRELA Q A
Sbjct: 492 GKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPIDCDKKRPPISVVVVCPTRELADQAAAEA 551
Query: 464 SE 469
++
Sbjct: 552 NK 553
>03_01_0399 +
3097878-3098141,3098254-3098547,3098659-3098886,
3099148-3099224,3099501-3099540,3099737-3099802,
3100305-3100706,3100777-3100888,3101445-3101530,
3101607-3101672
Length = 544
Score = 49.2 bits (112), Expect = 2e-06
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Frame = +2
Query: 101 DRSPYEVEDY-RNKHEVTVSGVEVPNPIEHFEEANF-PDYVCQAIKSMGYKDPTPIQAQG 274
D+ P ++D ++ + SG V FE+ P+ + MG+ P+ IQA
Sbjct: 72 DQGPPLLDDSDESQIQAVTSGGTVYESAAAFEDLKLTPELLKGLHDEMGFSRPSKIQAVT 131
Query: 275 WPIAMSG--KNLVGVAQTGSGKTLAYILPAIVHITNQPPIRRGDGPIALVLAPTRELAQQ 448
P+ ++ K+L+ A GSGKT ++L + + + + A+ + PTRELAQQ
Sbjct: 132 LPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQ-----AICICPTRELAQQ 186
Query: 449 IQQVASEFGHSSYVRNTC 502
+ V G + + C
Sbjct: 187 NKSVLMRMGKFTGITCAC 204
>02_01_0355 +
2558792-2558862,2558993-2559099,2559185-2559615,
2560100-2560735
Length = 414
Score = 48.4 bits (110), Expect = 3e-06
Identities = 32/98 (32%), Positives = 53/98 (54%)
Frame = +2
Query: 182 EHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 361
E F++ + + + I + G++ P+ IQ +G G +++ AQ+G+GKT A I
Sbjct: 41 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKT-ATFCSGI 99
Query: 362 VHITNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFG 475
+ + + +LVLAPTRELAQQI++V G
Sbjct: 100 LQQLDYGLVECQ----SLVLAPTRELAQQIEKVMRALG 133
>09_03_0167 +
12965030-12965356,12966100-12966387,12966704-12966826,
12967229-12967611,12967863-12968190,12968324-12968353,
12968837-12968989,12969510-12969815
Length = 645
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
+E D + A+ G P+ +QA P ++ +++ A+TGSGKT Y++P I
Sbjct: 84 WESLGVSDRLASALHGAGLARPSLVQAACIPHVLTTNDVIVAAETGSGKTHGYLVPLIEK 143
Query: 368 IT---------NQPPIRRGDGPIALVLAPTRELAQQIQQVAS 466
+ N + G IALVL P L +Q+ ++A+
Sbjct: 144 LCSKSISAEDGNSQDVTSGSPNIALVLCPNVMLCEQVVRMAN 185
>02_01_0091 + 646299-649082
Length = 927
Score = 41.5 bits (93), Expect = 4e-04
Identities = 26/74 (35%), Positives = 40/74 (54%)
Frame = +2
Query: 224 AIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPPIRRGDG 403
A++S+G QAQ A+SG+++V T SGK+L Y +P + I+ +
Sbjct: 179 ALRSIGVTKLYAHQAQAVQSAVSGEHVVVSTSTSSGKSLCYNIPVLESIS------QSSA 232
Query: 404 PIALVLAPTRELAQ 445
P AL + PT+ LAQ
Sbjct: 233 PCALYIFPTKALAQ 246
>02_05_1067 -
33858215-33858321,33858422-33858527,33859014-33859218,
33859463-33859650,33859780-33859957,33860201-33860298,
33860619-33860873,33861002-33861236,33861846-33861973
Length = 499
Score = 41.1 bits (92), Expect = 5e-04
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Frame = +2
Query: 176 PIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGW-----PIAMSGKNLVGVAQTGSGKTL 340
P+ H + P V + ++ MG + P+Q W P A +++ + TGSGKTL
Sbjct: 33 PVAHLPRLD-PRLV-KPLQRMGIESFFPVQVAAWLETIGPGAFE-RDICINSPTGSGKTL 89
Query: 341 AYILPAIVHITNQPPIRRGDGPIALVLAPTRELAQQIQQV 460
AY LP + + R+ ALV+ PTR+LA Q+++V
Sbjct: 90 AYALPIVQMLAT----RKVRCLRALVVLPTRDLALQVKEV 125
>01_05_0296 +
20567259-20567386,20568895-20569123,20569205-20569436,
20569583-20569701,20570321-20570377,20570455-20570639,
20571416-20571560,20571630-20571713,20571798-20571861,
20571889-20571932
Length = 428
Score = 40.3 bits (90), Expect = 8e-04
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = +2
Query: 254 TPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPPIRRGDGPIALVLAPTR 433
TP+Q + P A+ G +++ A++G GKT ++L ++ I P+ G ALVL TR
Sbjct: 60 TPVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQI---DPVAGQVG--ALVLCHTR 114
Query: 434 ELAQQI 451
ELA QI
Sbjct: 115 ELAYQI 120
>01_05_0295 +
20537147-20537291,20539111-20539283,20539365-20539596,
20539743-20539861,20540480-20540536,20540615-20540799,
20542252-20542396,20542463-20542546,20542634-20542697,
20542799-20542809
Length = 404
Score = 37.5 bits (83), Expect = 0.006
Identities = 25/67 (37%), Positives = 38/67 (56%)
Frame = +2
Query: 251 PTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPPIRRGDGPIALVLAPT 430
P +Q + P A+ G +++ A++G GKT ++L ++ I P+ G ALVL T
Sbjct: 46 PPKVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQID---PVAGQVG--ALVLCHT 100
Query: 431 RELAQQI 451
RELA QI
Sbjct: 101 RELAYQI 107
>10_08_0429 +
17845303-17845431,17845508-17845684,17845782-17845895,
17846386-17846520,17847659-17847790,17847919-17848071,
17848574-17848709,17849338-17849443,17849538-17849730,
17849803-17849963,17850227-17850442,17850732-17850997,
17851505-17851779,17851871-17852327,17853973-17854055,
17854260-17854469,17854897-17855373,17855462-17855743,
17855910-17856236,17856418-17856507,17856788-17856899,
17857004-17857104,17857524-17857568
Length = 1458
Score = 35.9 bits (79), Expect = 0.018
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 299 NLVGVAQTGSGKTLAYILPAIVHITNQPPIRRGDGP--IALVLAPTRELAQQIQQVASEF 472
N + V TGSGKT+ ++ A H +R G+ P I + LAPT L Q +V E+
Sbjct: 54 NTIAVLDTGSGKTMVAVMLAREHARR---VRAGEAPRRIVVFLAPTVHLVHQQFEVIREY 110
>11_08_0102 -
28354880-28355056,28355159-28355376,28355634-28355712,
28356451-28356519,28356602-28356681,28356818-28356925,
28357103-28357169,28357894-28357959,28358042-28358119,
28358198-28358250,28359542-28359575,28359851-28359865,
28360082-28360109,28360628-28360716,28361688-28361810,
28362192-28362296,28362381-28362485,28362924-28363139,
28364656-28364845,28365193-28365418,28366096-28366162
Length = 730
Score = 33.1 bits (72), Expect = 0.13
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +2
Query: 287 MSGKNLVGVAQTGSGKTLAYILPAIVHITNQPPIRRGDGPIALVLAPTRELAQQIQQVAS 466
MSG++++ + G GK+L Y LPA++H DG I LV++P L Q +
Sbjct: 118 MSGRDVLVIMAAGGGKSLCYQLPAVLH----------DG-ITLVVSPLLSLIQDQVMGLA 166
Query: 467 EFGHSSYV 490
G +Y+
Sbjct: 167 ALGIQAYM 174
>11_06_0691 -
26315738-26315848,26315939-26316163,26316249-26316602,
26316681-26316795,26316882-26316925,26317026-26317122,
26317243-26317406,26317499-26317726,26317903-26318222,
26320028-26320136
Length = 588
Score = 32.3 bits (70), Expect = 0.23
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +2
Query: 239 GYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
G K P+Q + A+S + + TG GK+L Y LPA +H
Sbjct: 183 GNKSFRPLQYEACRAAVSNMDTFVLMPTGGGKSLCYQLPATLH 225
>03_02_0143 - 5888005-5888088,5888818-5888949,5889485-5889634,
5890540-5890710,5890840-5891007,5891139-5891234,
5891777-5891839,5891949-5892114,5892207-5892274,
5892646-5892789,5893111-5893176,5893329-5893520,
5894567-5894657,5895241-5895329,5895521-5895583,
5895698-5895823,5895902-5895991,5896059-5896181,
5896503-5896619,5896704-5896904,5897643-5897723,
5897897-5897977,5898083-5898184,5898264-5898488,
5898571-5898726,5898798-5899010,5899306-5899455,
5900082-5900204,5900299-5900364,5900555-5900620,
5900686-5900817,5900891-5900965,5901355-5901438,
5901516-5901668,5901741-5901806,5902044-5902205,
5902272-5902388,5902495-5902566,5902702-5902761,
5902869-5902985,5904131-5904430,5904518-5904622,
5905710-5905775,5905853-5906297,5906399-5906567,
5906684-5906736,5906819-5906925
Length = 1981
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 257 PIQAQGWPIAM-SGKNLVGVAQTGSGKTLAYILPAIVHITNQPP 385
PIQ Q + + S N++ A TGSGKT++ L A++H+ N P
Sbjct: 1284 PIQTQAFHVLYHSDNNVLLGAPTGSGKTISAEL-AMLHLFNTQP 1326
>01_06_1742 -
39585879-39585994,39586089-39586238,39586288-39586375,
39586479-39586640,39586753-39586877,39586992-39587030,
39587290-39587476,39587643-39587713,39589371-39589564,
39589656-39589767,39589899-39590082,39590177-39590503,
39590780-39591061,39591148-39591621,39591730-39591813,
39591850-39591939,39592024-39592247,39592503-39592600,
39592679-39593169,39593249-39593520,39594266-39594522,
39594672-39594890,39595007-39595167,39595249-39595441,
39595528-39595633,39595947-39596121,39596404-39596556,
39596663-39596794,39597120-39597184,39597754-39597819,
39598433-39598511,39598587-39598767,39598864-39598976
Length = 1889
Score = 29.9 bits (64), Expect = 1.2
Identities = 23/96 (23%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Frame = +2
Query: 173 NPIEHFEEANFPDYVC--QAIKSMGYKDPTP--IQAQGWPIAMSGKNLVGVAQTGSGKTL 340
NP++ E++ ++ Q ++ +D TP Q + +AM +N + + TG+GKT+
Sbjct: 6 NPLKRSLESSSQEHEAGKQKLQKRECQDFTPRRYQLDVYEVAMR-RNTIAMLDTGAGKTM 64
Query: 341 AYILPAIVHITNQPPIRRGDGPIALVLAPTRELAQQ 448
++ ++ + + G + + LAPT +L Q
Sbjct: 65 IAVM--LIKEFGKINRTKNAGKVIIFLAPTVQLVTQ 98
>03_05_0589 + 25919965-25920331,25920461-25920780
Length = 228
Score = 29.5 bits (63), Expect = 1.6
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 353 PAIVHITNQPPIRRGDGPIALVLAPTRELAQQIQQVAS---EFGHSSYVRNT 499
PA + PP+ D P A V AP + QVAS E HS+ VRN+
Sbjct: 156 PAEPEASEAPPVPADDSPAATVTAPGDAGSSAGSQVASKLPELLHSAGVRNS 207
>09_02_0405 -
8597807-8598045,8599218-8599284,8599571-8599636,
8599731-8599795,8600514-8600872,8601118-8601125,
8601567-8601656,8601770-8601962,8603518-8603608,
8603948-8604080,8605340-8605480,8605601-8605662,
8605743-8605830,8606107-8606536,8606651-8606757
Length = 712
Score = 29.1 bits (62), Expect = 2.1
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +2
Query: 299 NLVGVAQTGSGKTL--AYILPAIVHITNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 469
N + +TGSGKTL +L A H +P RR A+ L PT L Q +V +
Sbjct: 49 NTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRR----FAVFLVPTVVLVGQQARVVEQ 103
>04_01_0567 - 7263744-7263922,7264020-7264259,7264919-7264982,
7265088-7265393,7265652-7265866,7266195-7266489,
7266596-7266655,7267091-7267717,7268510-7268596,
7269292-7269612,7270051-7270224,7272806-7275022
Length = 1594
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +2
Query: 182 EHFEEANFPDYVCQAIKSMG--YKDPTPIQAQGWPIAMSGKNLVG-VAQTGSGKT 337
+H N+P + I + Y+ TP+ +G +++SG +G V +TGSGK+
Sbjct: 1313 DHLPSPNWPTHGDIDIDDLKVRYRPNTPLILKGITVSISGGEKIGVVGRTGSGKS 1367
>03_05_0155 -
21307001-21307239,21308217-21308320,21308564-21308772,
21308773-21308838,21308933-21308997,21309716-21309942,
21310156-21310269,21310515-21310522,21310964-21311053,
21311167-21311359,21312934-21313024,21313364-21313496,
21314756-21314896,21315017-21315078,21315159-21315246,
21315523-21315952,21316067-21316173
Length = 788
Score = 29.1 bits (62), Expect = 2.1
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +2
Query: 299 NLVGVAQTGSGKTL--AYILPAIVHITNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 469
N + +TGSGKTL +L A H +P RR A+ L PT L Q +V +
Sbjct: 49 NTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRR----FAVFLVPTVVLVGQQARVVEQ 103
>05_05_0174 -
22960732-22960815,22960907-22961419,22961576-22962058,
22964191-22964673
Length = 520
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -2
Query: 471 NSEATCCIC*ASSLVGARTNAIGPS-PRRM 385
+S C + SSL+G RT IGP+ PRR+
Sbjct: 371 HSSPVCSLSGLSSLLGFRTRGIGPTEPRRL 400
>01_07_0192 - 41888998-41890632
Length = 544
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 155 SGVEVPNP--IEHFEEANFPDYVCQAIKSMGYKD 250
SGV NP ++HF A+FP+YV A ++ ++D
Sbjct: 84 SGVATANPAVVDHFLRASFPNYVKGARFAVPFED 117
>01_01_0103 -
773727-774737,774797-774813,774852-775078,777465-778237
Length = 675
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +1
Query: 217 VSSNKKYGLQRSYPYTGSRMANRYVREKLGWCGPNRFRQNFGL 345
VS +GL + YP S +++R +R +G+ P ++FG+
Sbjct: 485 VSKVADFGLAKLYPREKSFVSDRALRGTVGYMAPEMVSRSFGV 527
>01_05_0592 -
23483834-23484285,23484357-23484455,23484534-23484702,
23485049-23485363,23485561-23485767,23485852-23486106,
23486575-23486736
Length = 552
Score = 27.9 bits (59), Expect = 4.8
Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 8/110 (7%)
Frame = +2
Query: 140 HEVTVSGVEVPNPIEHF---EEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVG 310
HE+ G++ HF + A + A + G DP + + + +
Sbjct: 53 HELKEQGLQGEQITRHFIKSQLAPIKERSRTAFEFDGKNDPNREDPESLEFKIMKERMYK 112
Query: 311 VAQTGSGKTLAYILPAIVHITNQPP-----IRRGDGPIALVLAPTRELAQ 445
+ TG + +Y+LP + + PP + + D PIA +P ++ Q
Sbjct: 113 IFSTGIVVSYSYLLPVVPYNAFNPPPPEFSLMKSDPPIAQRRSPRQQAGQ 162
>01_01_0118 - 871481-872606,872795-872950,873051-873817
Length = 682
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +1
Query: 235 YGLQRSYPYTGSRMANRYVREKLGWCGPNRFRQNFGL 345
+GL + YP S +++R +R +G+ P ++FG+
Sbjct: 502 FGLAKLYPRDKSFVSDRALRGTVGYMAPEMVSRSFGI 538
>01_01_0114 - 851249-852372,852577-852740,852838-853568
Length = 672
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +1
Query: 235 YGLQRSYPYTGSRMANRYVREKLGWCGPNRFRQNFGL 345
+GL + YP S +++R +R +G+ P ++FG+
Sbjct: 496 FGLAKLYPRNKSFVSDRALRGTVGYIAPEMVSRSFGV 532
>10_01_0003 +
46158-46428,46588-46706,46819-46928,48977-49415,
49511-49633,49805-50106,50143-50350,50729-51448
Length = 763
Score = 27.1 bits (57), Expect = 8.5
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 80 NPHKSVLDRS--PYEVEDYRNKHEVTVSGVEVPNPIEHFEEAN 202
N +S+LD YE + +++E+T+S PN E +AN
Sbjct: 234 NNAESILDEGYISYEAQTPADRYEITISDNGQPNDYESLVDAN 276
>08_01_0117 +
941334-941339,941720-941906,942444-942565,942648-942656,
942965-943067,943204-943247,943487-943516,943615-943737,
943816-943841,943934-944015,944137-944178,944259-944292,
944424-944451,944779-945022,945023-945124,945318-945443,
945533-945715,945803-945961
Length = 549
Score = 27.1 bits (57), Expect = 8.5
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +2
Query: 284 AMSGKN--LVGVAQTGSGKTLAYILPAIVHITNQ 379
A+SG N ++ QTG+GKT + P+I+H Q
Sbjct: 144 AISGINGTIITYGQTGAGKTYSMEGPSILHCNKQ 177
>05_04_0123 + 18210069-18213737
Length = 1222
Score = 27.1 bits (57), Expect = 8.5
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 171 LILLNILK-RQTFQIMCVKQ*KVWVTKILPLYRLKDGQSL 287
+ L NI+K + T I C+K VW L + RLKD + L
Sbjct: 778 ITLRNIVKLKVTDSINCMKLPSVWKLPFLEVLRLKDMKKL 817
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,221,517
Number of Sequences: 37544
Number of extensions: 293581
Number of successful extensions: 812
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1059318940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -