Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_K06
(502 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 160 6e-40
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 132 1e-31
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 129 1e-30
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 126 9e-30
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 103 1e-22
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 98 3e-21
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 98 3e-21
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 98 3e-21
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 96 1e-20
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 79 2e-15
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 75 3e-14
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 73 2e-13
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 73 2e-13
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 72 3e-13
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 72 3e-13
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 71 4e-13
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 71 4e-13
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 71 4e-13
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 68 4e-12
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 68 4e-12
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 68 4e-12
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 66 1e-11
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 64 5e-11
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 64 5e-11
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 64 7e-11
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 64 7e-11
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 64 7e-11
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 62 2e-10
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 61 4e-10
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 60 9e-10
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 60 9e-10
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 58 4e-09
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 58 4e-09
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 57 8e-09
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 56 1e-08
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 55 3e-08
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 54 8e-08
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 53 1e-07
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 51 4e-07
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 48 5e-06
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 48 5e-06
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 42 3e-04
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 38 0.005
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 33 0.088
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 33 0.12
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 33 0.12
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p... 32 0.20
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 32 0.27
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 31 0.36
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 31 0.36
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 31 0.62
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 31 0.62
Z66495-13|CAA91278.1| 722|Caenorhabditis elegans Hypothetical p... 30 0.82
Z35602-3|CAA84672.1| 722|Caenorhabditis elegans Hypothetical pr... 30 0.82
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 1.9
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 29 1.9
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 29 1.9
AC006790-13|AAF60737.2| 351|Caenorhabditis elegans Serpentine r... 29 1.9
Z92834-9|CAB07386.2| 192|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z81089-2|CAB03136.1| 259|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z74036-3|CAA98488.1| 517|Caenorhabditis elegans Hypothetical pr... 28 4.4
AL117195-3|CAB55009.1| 629|Caenorhabditis elegans Hypothetical ... 28 4.4
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ... 28 4.4
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 160 bits (388), Expect = 6e-40
Identities = 75/165 (45%), Positives = 114/165 (69%)
Frame = +2
Query: 8 AGGQNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEH 187
AGG+ +R +W + +L P KDFY+ + +V R YE++ + + ++VT+ G VP P+
Sbjct: 73 AGGR-LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFE 131
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
F EA P + + + ++ PT IQ+ WPIAMSG++++ +A+TGSGKTLA++LPA+VH
Sbjct: 132 FNEAPLPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVH 190
Query: 368 ITNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGHSSYVRNTC 502
IT Q +RG+GP LVL PTRELAQQ+Q+V+ +F HS ++ TC
Sbjct: 191 ITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTC 235
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 132 bits (320), Expect = 1e-31
Identities = 60/142 (42%), Positives = 93/142 (65%)
Frame = +2
Query: 47 LSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQA 226
+ Q FNK+FY H+ + +V +N + V G++ P P+ F +F + +A
Sbjct: 220 IQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEA 279
Query: 227 IKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPPIRRGDGP 406
I+ Y+ PTPIQA P A+SG++++G+A+TGSGKT AY+ PAIVHI +QP ++ G+GP
Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGP 339
Query: 407 IALVLAPTRELAQQIQQVASEF 472
+A+++ PTRELA Q+ Q A +F
Sbjct: 340 VAVIVVPTRELAIQVFQEAKKF 361
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 129 bits (312), Expect = 1e-30
Identities = 59/133 (44%), Positives = 91/133 (68%), Gaps = 4/133 (3%)
Frame = +2
Query: 89 KSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQA 268
K + + S + +R +++ G VP P+ ++EEA FPD V QA+K +GY +PTPIQ
Sbjct: 270 KELSEMSDRDWRIFREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQR 329
Query: 269 QGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPPIRRGD----GPIALVLAPTRE 436
Q PI + ++++GVA+TGSGKT A++LP +V IT+ P + R + GP A+++APTRE
Sbjct: 330 QAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRE 389
Query: 437 LAQQIQQVASEFG 475
LAQQI++ ++FG
Sbjct: 390 LAQQIEEETNKFG 402
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 126 bits (304), Expect = 9e-30
Identities = 61/164 (37%), Positives = 99/164 (60%), Gaps = 1/164 (0%)
Frame = +2
Query: 14 GQNMRRPNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHE-VTVSGVEVPNPIEHF 190
G+ + + + + + F K+FY + + + EV+ YR + + +TV G++ P PI+ +
Sbjct: 247 GRMLAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTW 306
Query: 191 EEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI 370
+ + +K Y PT IQAQ P MSG++++G+A+TGSGKTLA++LP HI
Sbjct: 307 AQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHI 366
Query: 371 TNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGHSSYVRNTC 502
+QP + GDGPIA++LAPTRELA Q + A++F ++ C
Sbjct: 367 LDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVAC 410
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 103 bits (246), Expect = 1e-22
Identities = 59/164 (35%), Positives = 98/164 (59%), Gaps = 14/164 (8%)
Frame = +2
Query: 53 LQPFNKDFYNPHKSVLDRSPYEVED-YRNKHEVTV------SGVEVPNPIEHFEEANFPD 211
++P +D Y + SP ++++ Y N + V S V++P P+ FE+A +
Sbjct: 33 MKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAFGSN 92
Query: 212 Y-VCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHITNQ-PP 385
+ I+ G++ P+PIQ+Q WP+ +SG++ +GV+QTGSGKTLA++LPA++HI Q
Sbjct: 93 ASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQ 152
Query: 386 IRRGD-----GPIALVLAPTRELAQQIQQVASEFGHSSYVRNTC 502
+ D P LVL+PTRELAQQI+ ++ ++ Y ++ C
Sbjct: 153 YEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGY-KSVC 195
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 98.3 bits (234), Expect = 3e-21
Identities = 56/126 (44%), Positives = 74/126 (58%), Gaps = 10/126 (7%)
Frame = +2
Query: 146 VTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTG 325
V VSG VP IEHF EA F V + + GY PTP+Q P ++ ++L+ AQTG
Sbjct: 127 VEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTG 186
Query: 326 SGKTLAYILPAIVHITN------QPPI----RRGDGPIALVLAPTRELAQQIQQVASEFG 475
SGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A++F
Sbjct: 187 SGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFS 246
Query: 476 HSSYVR 493
+ S ++
Sbjct: 247 YKSNIQ 252
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 98.3 bits (234), Expect = 3e-21
Identities = 56/126 (44%), Positives = 74/126 (58%), Gaps = 10/126 (7%)
Frame = +2
Query: 146 VTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTG 325
V VSG VP IEHF EA F V + + GY PTP+Q P ++ ++L+ AQTG
Sbjct: 111 VEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTG 170
Query: 326 SGKTLAYILPAIVHITN------QPPI----RRGDGPIALVLAPTRELAQQIQQVASEFG 475
SGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A++F
Sbjct: 171 SGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFS 230
Query: 476 HSSYVR 493
+ S ++
Sbjct: 231 YKSNIQ 236
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 98.3 bits (234), Expect = 3e-21
Identities = 56/126 (44%), Positives = 74/126 (58%), Gaps = 10/126 (7%)
Frame = +2
Query: 146 VTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTG 325
V VSG VP IEHF EA F V + + GY PTP+Q P ++ ++L+ AQTG
Sbjct: 108 VEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTG 167
Query: 326 SGKTLAYILPAIVHITN------QPPI----RRGDGPIALVLAPTRELAQQIQQVASEFG 475
SGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A++F
Sbjct: 168 SGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFS 227
Query: 476 HSSYVR 493
+ S ++
Sbjct: 228 YKSNIQ 233
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 95.9 bits (228), Expect = 1e-20
Identities = 47/129 (36%), Positives = 75/129 (58%), Gaps = 4/129 (3%)
Frame = +2
Query: 77 YNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAI-KSMGYKDP 253
+ P + +S + E R + ++ G +P PI F E FP + + + K G P
Sbjct: 154 WRPPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTP 213
Query: 254 TPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHITNQP---PIRRGDGPIALVLA 424
T IQ QG P+A+SG++++G+A TGSGKT+ ++LP ++ Q P R +GP L++
Sbjct: 214 TAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIV 273
Query: 425 PTRELAQQI 451
P+RELA+QI
Sbjct: 274 PSRELARQI 282
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 78.6 bits (185), Expect = 2e-15
Identities = 44/122 (36%), Positives = 67/122 (54%), Gaps = 11/122 (9%)
Frame = +2
Query: 146 VTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTG 325
V +G +VP PI F + + +++ + IK+ GY PTP+Q P G++L+ AQTG
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 326 SGKTLAYILPAIVHITNQPPI-----------RRGDGPIALVLAPTRELAQQIQQVASEF 472
SGKT A+++P + I P R+ P ALVL+PTREL+ QI + +F
Sbjct: 214 SGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKF 273
Query: 473 GH 478
+
Sbjct: 274 AY 275
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 74.9 bits (176), Expect = 3e-14
Identities = 38/91 (41%), Positives = 54/91 (59%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
FE+ N + +A GY DPTPIQ P+A++GK++ A TG+GKT A++LP +
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 368 ITNQPPIRRGDGPIALVLAPTRELAQQIQQV 460
+ +P + LVL PTRELA Q+ QV
Sbjct: 210 MIYRP--KGASCTRVLVLVPTRELAIQVFQV 238
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 72.5 bits (170), Expect = 2e-13
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Frame = +2
Query: 176 PIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 355
P + F +++ P + + ++ GY TPIQ P+ GK+++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 356 AIVHITNQPPIRRG-DG---PIALVLAPTRELAQQIQQVASEFGHSS 484
+ + + + G +G P ++L PTRELA QI +F + S
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQS 402
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 72.5 bits (170), Expect = 2e-13
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Frame = +2
Query: 176 PIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 355
P + F +++ P + + ++ GY TPIQ P+ GK+++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 356 AIVHITNQPPIRRG-DG---PIALVLAPTRELAQQIQQVASEFGHSS 484
+ + + + G +G P ++L PTRELA QI +F + S
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQS 402
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 71.7 bits (168), Expect = 3e-13
Identities = 38/96 (39%), Positives = 58/96 (60%)
Frame = +2
Query: 215 VCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPPIRR 394
V +AI+ G+ PTPIQ + P M GK++V +++TGSGKT A+++P + + R
Sbjct: 35 VYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKR----RD 90
Query: 395 GDGPIALVLAPTRELAQQIQQVASEFGHSSYVRNTC 502
G AL+++PTRELA Q +V E G + +R C
Sbjct: 91 TTGIRALMVSPTRELALQTFKVVKELGRFTGLRCAC 126
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 71.7 bits (168), Expect = 3e-13
Identities = 38/96 (39%), Positives = 58/96 (60%)
Frame = +2
Query: 215 VCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPPIRR 394
V +AI+ G+ PTPIQ + P M GK++V +++TGSGKT A+++P + + R
Sbjct: 35 VYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKR----RD 90
Query: 395 GDGPIALVLAPTRELAQQIQQVASEFGHSSYVRNTC 502
G AL+++PTRELA Q +V E G + +R C
Sbjct: 91 TTGIRALMVSPTRELALQTFKVVKELGRFTGLRCAC 126
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 71.3 bits (167), Expect = 4e-13
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Frame = +2
Query: 176 PIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 355
P + F EAN + + + + GY TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 356 AIVHITNQPPIR-RGDG---PIALVLAPTRELAQQIQQVASEFGHSS 484
+ + + + G+G P ++L PTRELA QI +F + +
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQT 445
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 71.3 bits (167), Expect = 4e-13
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Frame = +2
Query: 176 PIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 355
P + F EAN + + + + GY TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 356 AIVHITNQPPIR-RGDG---PIALVLAPTRELAQQIQQVASEFGHSS 484
+ + + + G+G P ++L PTRELA QI +F + +
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQT 445
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 71.3 bits (167), Expect = 4e-13
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Frame = +2
Query: 176 PIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 355
P + F EAN + + + + GY TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 356 AIVHITNQPPIR-RGDG---PIALVLAPTRELAQQIQQVASEFGHSS 484
+ + + + G+G P ++L PTRELA QI +F + +
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQT 445
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 67.7 bits (158), Expect = 4e-12
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
F EAN + + + + GY TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 368 ITNQPPIR-RGDG---PIALVLAPTRELAQQIQQVASEFGHSS 484
+ ++ + G+G P ++L PTREL QI +F + +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQT 656
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 67.7 bits (158), Expect = 4e-12
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
F EAN + + + + GY TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 368 ITNQPPIR-RGDG---PIALVLAPTRELAQQIQQVASEFGHSS 484
+ ++ + G+G P ++L PTREL QI +F + +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQT 656
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 67.7 bits (158), Expect = 4e-12
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
F EAN + + + + GY TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 368 ITNQPPIR-RGDG---PIALVLAPTRELAQQIQQVASEFGHSS 484
+ ++ + G+G P ++L PTREL QI +F + +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQT 656
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 66.5 bits (155), Expect = 1e-11
Identities = 36/96 (37%), Positives = 52/96 (54%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
F E +C A + +G+ P+ IQ P A+ GK+++G+A+TGSGKT A+ +P +
Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQS 105
Query: 368 ITNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFG 475
+ + P LVL PTRELA QI Q G
Sbjct: 106 LLDHP-----QAFFCLVLTPTRELAFQIGQQFEALG 136
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 64.1 bits (149), Expect = 5e-11
Identities = 34/99 (34%), Positives = 58/99 (58%)
Frame = +2
Query: 179 IEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 358
+E F++ + + + I G++ P+ IQ + +GK+++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 359 IVHITNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFG 475
+ I ++ P + ALV+APTRELAQQIQ+V S G
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALG 121
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 64.1 bits (149), Expect = 5e-11
Identities = 34/99 (34%), Positives = 58/99 (58%)
Frame = +2
Query: 179 IEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 358
+E F++ + + + I G++ P+ IQ + +GK+++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 359 IVHITNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFG 475
+ I ++ P + ALV+APTRELAQQIQ+V S G
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALG 121
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 63.7 bits (148), Expect = 7e-11
Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Frame = +2
Query: 206 PDYVCQAIKSMGYKDPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI---- 370
P+ V +AI+ MG+ +PT IQ+ P A+ + +++G A+TGSGKTLA+ +P + +
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESS 222
Query: 371 --TNQPPIRRGDGPIALVLAPTRELAQQIQQ 457
+ + GP AL++APTREL QI +
Sbjct: 223 DDSQETESTEVRGPRALIVAPTRELVIQIMK 253
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 63.7 bits (148), Expect = 7e-11
Identities = 34/96 (35%), Positives = 55/96 (57%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
F + ++ Q +++M K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 368 ITNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFG 475
++ P G AL+L PTRELA QI + + G
Sbjct: 151 LSVDP-----YGIYALILTPTRELAFQIAEQFTALG 181
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 63.7 bits (148), Expect = 7e-11
Identities = 34/96 (35%), Positives = 55/96 (57%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
F + ++ Q +++M K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 368 ITNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFG 475
++ P G AL+L PTRELA QI + + G
Sbjct: 151 LSVDP-----YGIYALILTPTRELAFQIAEQFTALG 181
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 62.5 bits (145), Expect = 2e-10
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 5/115 (4%)
Frame = +2
Query: 119 VEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGK 298
++D R + + G +PN I F +++ + + + P+PIQ Q P +
Sbjct: 105 LDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERR 164
Query: 299 NLVGVAQTGSGKTLAYILPA---IVHITNQPPIRRGDGP--IALVLAPTRELAQQ 448
N++ A TGSGKTLA+ LP I+ + + + +A+VL PTRELA Q
Sbjct: 165 NVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 61.3 bits (142), Expect = 4e-10
Identities = 31/83 (37%), Positives = 55/83 (66%)
Frame = +2
Query: 221 QAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPPIRRGD 400
+A++ +G+ T IQA+ + GK+++ A+TGSGKTLA++LPAI + ++ ++ +
Sbjct: 81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHN 139
Query: 401 GPIALVLAPTRELAQQIQQVASE 469
G ++++PTREL+ Q V SE
Sbjct: 140 GTGVIIVSPTRELSMQTYGVLSE 162
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 60.1 bits (139), Expect = 9e-10
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Frame = +2
Query: 215 VCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPP--- 385
+ + +K + Y + IQ P + G +++G A+T +GKT A+ LP I I
Sbjct: 392 ILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETR 451
Query: 386 --IRRGDGPIALVLAPTRELAQQIQQ 457
R+ DGP+AL+LAPTRELA QI +
Sbjct: 452 NKARQDDGPLALILAPTRELAAQIHE 477
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 60.1 bits (139), Expect = 9e-10
Identities = 28/92 (30%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
F + + + ++I +G++ +Q +A+ KN++G A+TGSGKT A+++P +
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 368 ITNQPPIRRGD-GPIALVLAPTRELAQQIQQV 460
+ + G GP A+++APT+EL QI ++
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQIYKL 182
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 58.0 bits (134), Expect = 4e-09
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Frame = +2
Query: 125 DYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNL 304
D+ K + VE+P+ P + +K M PTPIQ + M G ++
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 305 VGVAQTGSGKTLAYILPAIVHITNQPPIRRG-----DGPIALVLAPTRELAQQIQQVASE 469
V A TGSGKTLA+++P ++ + + R P L++APTREL Q A +
Sbjct: 777 VACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQ 836
Query: 470 FGHSS 484
+ +
Sbjct: 837 LTYET 841
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 58.0 bits (134), Expect = 4e-09
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Frame = +2
Query: 125 DYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNL 304
D+ K + VE+P+ P + +K M PTPIQ + M G ++
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 305 VGVAQTGSGKTLAYILPAIVHITNQPPIRRG-----DGPIALVLAPTRELAQQIQQVASE 469
V A TGSGKTLA+++P ++ + + R P L++APTREL Q A +
Sbjct: 777 VACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQ 836
Query: 470 FGHSS 484
+ +
Sbjct: 837 LTYET 841
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 56.8 bits (131), Expect = 8e-09
Identities = 32/104 (30%), Positives = 57/104 (54%)
Frame = +2
Query: 164 EVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLA 343
E N I F++ + + + I + G++ P+ IQ + P + ++++ AQ+G+GKT
Sbjct: 20 EEVNVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTAT 79
Query: 344 YILPAIVHITNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFG 475
+ + + + Q +R AL+L+PTRELA QIQ+V G
Sbjct: 80 FSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALG 118
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 56.0 bits (129), Expect = 1e-08
Identities = 33/94 (35%), Positives = 53/94 (56%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
FE+ + I G++ P+PIQ +A++G++++ A+ G+GKT AY +P I
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 368 ITNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 469
I QP ++ A+V+ PTRELA Q Q+ E
Sbjct: 105 I--QPALKAIQ---AMVIVPTRELALQTSQICVE 133
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 54.8 bits (126), Expect = 3e-08
Identities = 30/99 (30%), Positives = 55/99 (55%)
Frame = +2
Query: 179 IEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 358
I F++ + + + I + G++ P+ IQ + P + ++++ AQ+G+GKT + +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISV 84
Query: 359 IVHITNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFG 475
+ + Q +R AL+L+PTRELA QIQ+V G
Sbjct: 85 LQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALG 118
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 53.6 bits (123), Expect = 8e-08
Identities = 31/87 (35%), Positives = 48/87 (55%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
FE+ + +K Y PT IQ +++G ++VG A+TGSGKTLA ++P ++
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP-VLE 136
Query: 368 ITNQPPIRRGDGPIALVLAPTRELAQQ 448
+ G AL+++PTRELA Q
Sbjct: 137 ALWRAKWSPDYGLGALIISPTRELALQ 163
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 53.2 bits (122), Expect = 1e-07
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Frame = +2
Query: 179 IEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 352
I F E V +A+ +M ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 353 PAIVHITNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFG 475
+ I P + LAPT ELA+QI +V + G
Sbjct: 268 TMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 303
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 53.2 bits (122), Expect = 1e-07
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Frame = +2
Query: 179 IEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 352
I F E V +A+ +M ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 353 PAIVHITNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFG 475
+ I P + LAPT ELA+QI +V + G
Sbjct: 293 TMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 328
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 53.2 bits (122), Expect = 1e-07
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Frame = +2
Query: 179 IEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 352
I F E V +A+ +M ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 353 PAIVHITNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFG 475
+ I P + LAPT ELA+QI +V + G
Sbjct: 677 TMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 712
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 51.2 bits (117), Expect = 4e-07
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 7/79 (8%)
Frame = +2
Query: 242 YKDPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI------TNQPPIRRGD 400
+ +PT IQ+ P A+ + +++G A+TGSGKTLA+ +P + + + +
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 401 GPIALVLAPTRELAQQIQQ 457
GP AL++APTREL QI +
Sbjct: 68 GPRALIVAPTRELVIQIMK 86
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 47.6 bits (108), Expect = 5e-06
Identities = 23/90 (25%), Positives = 52/90 (57%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
FE + +K+ + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 368 ITNQPPIRRGDGPIALVLAPTRELAQQIQQ 457
+ + R +++ PTRE++ QI++
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQIKE 108
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 47.6 bits (108), Expect = 5e-06
Identities = 23/90 (25%), Positives = 52/90 (57%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 367
FE + +K+ + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 368 ITNQPPIRRGDGPIALVLAPTRELAQQIQQ 457
+ + R +++ PTRE++ QI++
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQIKE 108
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 46.0 bits (104), Expect = 2e-05
Identities = 35/101 (34%), Positives = 51/101 (50%)
Frame = +2
Query: 170 PNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYI 349
P ++ F E P+ + KS YK T +Q ++ ++V + TGSGKTLA++
Sbjct: 7 PVALKTFREKLGPELLEVFDKS--YKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFV 64
Query: 350 LPAIVHITNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 472
LP + I N G AL+L+P+REL QI V F
Sbjct: 65 LPMMRMIQNAKLQPADIG--ALILSPSRELCSQIVSVIQPF 103
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +2
Query: 188 FEEANFPDYVCQAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 355
FEE + A+ S+ + PT +Q++ P + G + + A+TGSGKT A+ LP
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLP 59
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 37.5 bits (83), Expect = 0.005
Identities = 24/94 (25%), Positives = 44/94 (46%)
Frame = +2
Query: 221 QAIKSMGYKDPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPPIRRGD 400
+ I G++ P+ IQ +GK++ +Q GSGKT+ ++ + I + +
Sbjct: 9 RGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQ-- 66
Query: 401 GPIALVLAPTRELAQQIQQVASEFGHSSYVRNTC 502
++LAP R +AQ+ + G + V TC
Sbjct: 67 ---VILLAPQRGMAQRAHEQLKSLGRNLNVNATC 97
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 33.5 bits (73), Expect = 0.088
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +2
Query: 284 AMSGKNLVGVAQTGSGKTLAYILPAIVHI 370
A+ GKN V VA TGSGKT I A+ HI
Sbjct: 382 ALEGKNCVIVAPTGSGKTEVAIYAALKHI 410
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +2
Query: 278 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPPIRRGDGPIALVLAPTRELAQQI 451
P + +++ A TGSGKT+ Y+LP + + ++P A++L P + L QI
Sbjct: 151 PPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQI 204
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 33.1 bits (72), Expect = 0.12
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +2
Query: 296 KNLVGVAQTGSGKTLAYILPAIVHITNQPP----IRRGDGPIALVLAPTRELAQQI 451
+ L+ A TG GKT A+++PAI + P I P L+LA T L +Q+
Sbjct: 130 RGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
protein C52B9.8 protein.
Length = 1336
Score = 32.3 bits (70), Expect = 0.20
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 4/117 (3%)
Frame = +2
Query: 89 KSVLDRSPYEVEDYRNKHEVTVSG--VEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPI 262
KS+LD++ + ++Y NK ++ + E +E +F + S+ K P I
Sbjct: 315 KSILDKARNDDDEYENKTKMNIEDYYTTAHGVREEIKEQHF--MMGGGNPSLKLK-PYQI 371
Query: 263 QAQGWPIAMSGKNLVGVA--QTGSGKTLAYILPAIVHITNQPPIRRGDGPIALVLAP 427
+ W +++ NL G+ + G GKT + I IT I++ GP LV+ P
Sbjct: 372 KGLEWMVSLFNNNLNGILADEMGLGKT----IQTIAFITYLMEIKKTSGPF-LVIVP 423
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 31.9 bits (69), Expect = 0.27
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 239 GYKDPTPIQAQGW-PIAMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPPIRRGDGPIAL 415
G+K PIQ Q + + S +N++ A GSGKT L + H N P + A+
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENTPEAK------AV 1371
Query: 416 VLAPTRELAQQI 451
+ P ++A ++
Sbjct: 1372 YITPMEDMATKV 1383
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 31.5 bits (68), Expect = 0.36
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 260 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 361
+Q + G+ LV A TG GKT A+++PAI
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAI 52
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 31.5 bits (68), Expect = 0.36
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 260 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 361
+Q + G+ LV A TG GKT A+++PAI
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAI 152
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 30.7 bits (66), Expect = 0.62
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 257 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 364
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 89 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 124
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 30.7 bits (66), Expect = 0.62
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 257 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 364
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 112 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 147
>Z66495-13|CAA91278.1| 722|Caenorhabditis elegans Hypothetical
protein R13G10.4 protein.
Length = 722
Score = 30.3 bits (65), Expect = 0.82
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = +3
Query: 114 MK*RTIETNTKSLLVELKYLILLNILKRQTFQIMCVKQ*KVWVTKILPLYRLKD 275
+K RT++ K + +E+ +LLN +K F CV + + +K++ + ++D
Sbjct: 409 LKDRTVKFAVKYVNIEMNAHLLLNRMKTGDFHFACVVEYSAYDSKVVGIITIED 462
>Z35602-3|CAA84672.1| 722|Caenorhabditis elegans Hypothetical
protein R13G10.4 protein.
Length = 722
Score = 30.3 bits (65), Expect = 0.82
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = +3
Query: 114 MK*RTIETNTKSLLVELKYLILLNILKRQTFQIMCVKQ*KVWVTKILPLYRLKD 275
+K RT++ K + +E+ +LLN +K F CV + + +K++ + ++D
Sbjct: 409 LKDRTVKFAVKYVNIEMNAHLLLNRMKTGDFHFACVVEYSAYDSKVVGIITIED 462
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 320 TGSGKTLAYILPAIVH 367
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 29.1 bits (62), Expect = 1.9
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 281 IAMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPPIRRGDGPIALVLAP-TRELAQQIQQ 457
+A+ GKN + A TGSGKT+ I I+ + G AL + P + L QQ
Sbjct: 303 VALQGKNTIVTAPTGSGKTV--IAANIIKEHFESRSSEGKRFKALFMTPNSMILNQQAAS 360
Query: 458 VASEFGH 478
++S H
Sbjct: 361 ISSYLDH 367
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 29.1 bits (62), Expect = 1.9
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 281 IAMSGKNLVGVAQTGSGKTLAYILPAIVHITNQPPIRRGDGPIALVLAP-TRELAQQIQQ 457
+A+ GKN + A TGSGKT+ I I+ + G AL + P + L QQ
Sbjct: 303 VALQGKNTIVTAPTGSGKTV--IAANIIKEHFESRSSEGKRFKALFMTPNSMILNQQAAS 360
Query: 458 VASEFGH 478
++S H
Sbjct: 361 ISSYLDH 367
>AC006790-13|AAF60737.2| 351|Caenorhabditis elegans Serpentine
receptor, class z protein5 protein.
Length = 351
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 238 HTFYCLTHIIWKVCLFKMFNRIRYFNSTNSDFVFVSIVLYFI 113
H C+ +I +CLF+MF + N D V YFI
Sbjct: 64 HRLICVMLVILLLCLFEMFYGFKIMNMLELDLFDVLYHYYFI 105
>Z92834-9|CAB07386.2| 192|Caenorhabditis elegans Hypothetical
protein F39B2.5 protein.
Length = 192
Score = 28.3 bits (60), Expect = 3.3
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Frame = +2
Query: 50 SLQPF-NKDFYNPHKSV---LDRS---PYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFP 208
S QP+ ++D++N + + L++S E+ YR HE + V + P+ E
Sbjct: 76 SRQPYVSRDYWNLVEIIERSLEQSLTGQQEMLHYRRGHEAEAARVNLTRPLTKRELLPSL 135
Query: 209 DYVCQ-AIKSMGYKDPTP 259
Y+C+ +K+ K PTP
Sbjct: 136 QYLCRFTLKTSQQKPPTP 153
>Z81089-2|CAB03136.1| 259|Caenorhabditis elegans Hypothetical
protein F53H4.3 protein.
Length = 259
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 56 QPFNKDFYNPHKSVLDRSPYE-VEDYRNKHEVTVSGVEVPNPIEHFEEANFP 208
QP N+D Y + +L+ Y+ D N+++ G +VPNP E P
Sbjct: 200 QPNNRDTYL-NNLLLEIEEYDDFLDQVNQYKTRYPGAQVPNPYRSLPEGKLP 250
>Z74036-3|CAA98488.1| 517|Caenorhabditis elegans Hypothetical
protein F55C10.4 protein.
Length = 517
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 277 PSLSLYRGRIFVTHTFYCLTHIIWKVCL 194
P L Y + F+ TF+C+T K+CL
Sbjct: 3 PRLPRYFLKYFIIFTFFCVTFCFLKLCL 30
>AL117195-3|CAB55009.1| 629|Caenorhabditis elegans Hypothetical
protein Y57A10A.4 protein.
Length = 629
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 83 PHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEH-FEEANFPDY 214
PH +L+ P+E +D K+ V G P PIE F++ N D+
Sbjct: 416 PHVPILN-PPFESDDEEVKYIGAVKGQPKPGPIESVFDQINNRDH 459
>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
protein Y46G5A.6 protein.
Length = 1002
Score = 27.9 bits (59), Expect = 4.4
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +2
Query: 239 GYKDPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHITNQPPIRRGDGPIAL 415
GYK IQ++ A+ K +L+ A TG+GKT +L + I N DG + L
Sbjct: 273 GYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVGLLTMLQEIGNH---LAEDGSVKL 329
Query: 416 ------VLAPTRELAQQI 451
+APT+ L Q++
Sbjct: 330 EEFKIVYIAPTKSLVQEM 347
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,150,854
Number of Sequences: 27780
Number of extensions: 254199
Number of successful extensions: 814
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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