Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_K04
         (500 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3030|AAF57456.1|  105|Drosophila melanogaster CG18065-P...    75   5e-14
BT029406-1|ABK57063.1|  245|Drosophila melanogaster IP02356p pro...    29   4.7  

>AE013599-3030|AAF57456.1|  105|Drosophila melanogaster CG18065-PA,
           isoform A protein.
          Length = 105

 Score = 74.9 bits (176), Expect = 5e-14
 Identities = 35/89 (39%), Positives = 55/89 (61%)
 Frame = +2

Query: 86  KQRLAERVQVNMNNITSLGRHIQRGSKSNELLIKAAREMASTENQMESADENLKKMQLIS 265
           K+RL  RV  N NN+ S+ R + RGSKSNE++ +  +     +   + + +NL+KM LI 
Sbjct: 17  KKRLCVRVGENANNLGSVARQVVRGSKSNEIMHQTLKNFTQVDVVSDYSHQNLQKMTLIL 76

Query: 266 VHIGYQYENIHKSAQVLSEIKEQIMAMQK 352
            H+GYQY+ +  S   L  +KEQ+ AM++
Sbjct: 77  QHVGYQYDVMQDSVNHLDYLKEQVTAMER 105


>BT029406-1|ABK57063.1|  245|Drosophila melanogaster IP02356p
           protein.
          Length = 245

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -3

Query: 381 HYFFLNMIYHFCIAIICSLISDN 313
           H+F   +IY+FCI+ + +LI  N
Sbjct: 6   HFFKTKIIYYFCISALVNLIMSN 28


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,098,587
Number of Sequences: 53049
Number of extensions: 343470
Number of successful extensions: 804
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1784022528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)