Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_K03
(632 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein. 171 2e-42
BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13 p... 171 2e-42
BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein. 171 2e-42
BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13 p... 171 2e-42
BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13 p... 171 2e-42
BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein. 171 2e-42
BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13 p... 171 2e-42
BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13 p... 171 2e-42
BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13 p... 171 2e-42
BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13 p... 171 2e-42
BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13 p... 171 2e-42
BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13 p... 171 2e-42
BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein. 171 2e-42
AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13 p... 171 2e-42
BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13 p... 168 2e-41
AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13 p... 42 0.002
AB033111-1|BAA86599.1| 785|Homo sapiens KIAA1285 protein protein. 31 3.4
BC005882-1|AAH05882.1| 285|Homo sapiens vacuolar protein sortin... 30 5.9
AK022812-1|BAB14255.1| 285|Homo sapiens protein ( Homo sapiens ... 30 5.9
>X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein.
Length = 211
Score = 171 bits (416), Expect = 2e-42
Identities = 90/163 (55%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
Frame = +1
Query: 145 FPKDWERFWEELV*ISQLVVHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVRYHTKVRA 324
F KDW+R + RRK R +RP+VRCPTVRYHTKVRA
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKA-RQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRA 72
Query: 325 GRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFP-KGK 501
GRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LILFP K
Sbjct: 73 GRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLILFPRKPS 132
Query: 502 KVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITDDEKN 630
KG+++ EE KLATQL GP+MPV+ K AR IT++EKN
Sbjct: 133 APKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKN 175
>BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 171 bits (416), Expect = 2e-42
Identities = 90/163 (55%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
Frame = +1
Query: 145 FPKDWERFWEELV*ISQLVVHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVRYHTKVRA 324
F KDW+R + RRK R +RP+VRCPTVRYHTKVRA
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKA-RQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRA 72
Query: 325 GRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFP-KGK 501
GRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LILFP K
Sbjct: 73 GRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPS 132
Query: 502 KVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITDDEKN 630
KG+++ EE KLATQL GP+MPV+ K AR IT++EKN
Sbjct: 133 APKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKN 175
>BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 171 bits (416), Expect = 2e-42
Identities = 90/163 (55%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
Frame = +1
Query: 145 FPKDWERFWEELV*ISQLVVHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVRYHTKVRA 324
F KDW+R + RRK R +RP+VRCPTVRYHTKVRA
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKA-RQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRA 72
Query: 325 GRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFP-KGK 501
GRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LILFP K
Sbjct: 73 GRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLILFPRKPS 132
Query: 502 KVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITDDEKN 630
KG+++ EE KLATQL GP+MPV+ K AR IT++EKN
Sbjct: 133 APKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKN 175
>BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 171 bits (416), Expect = 2e-42
Identities = 90/163 (55%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
Frame = +1
Query: 145 FPKDWERFWEELV*ISQLVVHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVRYHTKVRA 324
F KDW+R + RRK R +RP+VRCPTVRYHTKVRA
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKA-RQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRA 72
Query: 325 GRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFP-KGK 501
GRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LILFP K
Sbjct: 73 GRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPS 132
Query: 502 KVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITDDEKN 630
KG+++ EE KLATQL GP+MPV+ K AR IT++EKN
Sbjct: 133 APKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKN 175
>BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 171 bits (416), Expect = 2e-42
Identities = 90/163 (55%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
Frame = +1
Query: 145 FPKDWERFWEELV*ISQLVVHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVRYHTKVRA 324
F KDW+R + RRK R +RP+VRCPTVRYHTKVRA
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKA-RQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRA 72
Query: 325 GRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFP-KGK 501
GRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LILFP K
Sbjct: 73 GRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPS 132
Query: 502 KVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITDDEKN 630
KG+++ EE KLATQL GP+MPV+ K AR IT++EKN
Sbjct: 133 APKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKN 175
>BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 171 bits (416), Expect = 2e-42
Identities = 90/163 (55%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
Frame = +1
Query: 145 FPKDWERFWEELV*ISQLVVHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVRYHTKVRA 324
F KDW+R + RRK R +RP+VRCPTVRYHTKVRA
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKA-RQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRA 72
Query: 325 GRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFP-KGK 501
GRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LILFP K
Sbjct: 73 GRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPS 132
Query: 502 KVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITDDEKN 630
KG+++ EE KLATQL GP+MPV+ K AR IT++EKN
Sbjct: 133 APKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKN 175
>BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 171 bits (416), Expect = 2e-42
Identities = 90/163 (55%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
Frame = +1
Query: 145 FPKDWERFWEELV*ISQLVVHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVRYHTKVRA 324
F KDW+R + RRK R +RP+VRCPTVRYHTKVRA
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKA-RQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRA 72
Query: 325 GRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFP-KGK 501
GRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LILFP K
Sbjct: 73 GRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPS 132
Query: 502 KVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITDDEKN 630
KG+++ EE KLATQL GP+MPV+ K AR IT++EKN
Sbjct: 133 APKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKN 175
>BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 171 bits (416), Expect = 2e-42
Identities = 90/163 (55%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
Frame = +1
Query: 145 FPKDWERFWEELV*ISQLVVHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVRYHTKVRA 324
F KDW+R + RRK R +RP+VRCPTVRYHTKVRA
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKA-RQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRA 72
Query: 325 GRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFP-KGK 501
GRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LILFP K
Sbjct: 73 GRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPS 132
Query: 502 KVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITDDEKN 630
KG+++ EE KLATQL GP+MPV+ K AR IT++EKN
Sbjct: 133 APKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKN 175
>BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 171 bits (416), Expect = 2e-42
Identities = 90/163 (55%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
Frame = +1
Query: 145 FPKDWERFWEELV*ISQLVVHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVRYHTKVRA 324
F KDW+R + RRK R +RP+VRCPTVRYHTKVRA
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKA-RQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRA 72
Query: 325 GRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFP-KGK 501
GRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LILFP K
Sbjct: 73 GRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPS 132
Query: 502 KVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITDDEKN 630
KG+++ EE KLATQL GP+MPV+ K AR IT++EKN
Sbjct: 133 APKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKN 175
>BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 171 bits (416), Expect = 2e-42
Identities = 90/163 (55%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
Frame = +1
Query: 145 FPKDWERFWEELV*ISQLVVHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVRYHTKVRA 324
F KDW+R + RRK R +RP+VRCPTVRYHTKVRA
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKA-RQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRA 72
Query: 325 GRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFP-KGK 501
GRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LILFP K
Sbjct: 73 GRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPS 132
Query: 502 KVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITDDEKN 630
KG+++ EE KLATQL GP+MPV+ K AR IT++EKN
Sbjct: 133 APKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKN 175
>BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 171 bits (416), Expect = 2e-42
Identities = 90/163 (55%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
Frame = +1
Query: 145 FPKDWERFWEELV*ISQLVVHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVRYHTKVRA 324
F KDW+R + RRK R +RP+VRCPTVRYHTKVRA
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKA-RQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRA 72
Query: 325 GRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFP-KGK 501
GRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LILFP K
Sbjct: 73 GRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPS 132
Query: 502 KVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITDDEKN 630
KG+++ EE KLATQL GP+MPV+ K AR IT++EKN
Sbjct: 133 APKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKN 175
>BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 171 bits (416), Expect = 2e-42
Identities = 90/163 (55%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
Frame = +1
Query: 145 FPKDWERFWEELV*ISQLVVHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVRYHTKVRA 324
F KDW+R + RRK R +RP+VRCPTVRYHTKVRA
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKA-RQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRA 72
Query: 325 GRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFP-KGK 501
GRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LILFP K
Sbjct: 73 GRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPS 132
Query: 502 KVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITDDEKN 630
KG+++ EE KLATQL GP+MPV+ K AR IT++EKN
Sbjct: 133 APKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKN 175
>BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 171 bits (416), Expect = 2e-42
Identities = 90/163 (55%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
Frame = +1
Query: 145 FPKDWERFWEELV*ISQLVVHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVRYHTKVRA 324
F KDW+R + RRK R +RP+VRCPTVRYHTKVRA
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKA-RQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRA 72
Query: 325 GRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFP-KGK 501
GRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LILFP K
Sbjct: 73 GRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPS 132
Query: 502 KVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITDDEKN 630
KG+++ EE KLATQL GP+MPV+ K AR IT++EKN
Sbjct: 133 APKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKN 175
>AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 171 bits (416), Expect = 2e-42
Identities = 90/163 (55%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
Frame = +1
Query: 145 FPKDWERFWEELV*ISQLVVHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVRYHTKVRA 324
F KDW+R + RRK R +RP+VRCPTVRYHTKVRA
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKA-RQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRA 72
Query: 325 GRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFP-KGK 501
GRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LILFP K
Sbjct: 73 GRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPS 132
Query: 502 KVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITDDEKN 630
KG+++ EE KLATQL GP+MPV+ K AR IT++EKN
Sbjct: 133 APKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKN 175
>BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 168 bits (408), Expect = 2e-41
Identities = 89/163 (54%), Positives = 108/163 (66%), Gaps = 1/163 (0%)
Frame = +1
Query: 145 FPKDWERFWEELV*ISQLVVHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVRYHTKVRA 324
F KDW+R + RRK R +RP+VRC TVRYHTKVRA
Sbjct: 14 FHKDWQRRVATWFNQPARKIRRRKA-RQAKARRIAPRPASGPIRPIVRCTTVRYHTKVRA 72
Query: 325 GRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFP-KGK 501
GRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LILFP K
Sbjct: 73 GRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPS 132
Query: 502 KVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITDDEKN 630
KG+++ EE KLATQL GP+MPV+ K AR IT++EKN
Sbjct: 133 APKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKN 175
>AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13
protein.
Length = 65
Score = 41.5 bits (93), Expect = 0.002
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +1
Query: 538 KLATQLRGPLMPVQQTAPKSVARPITDDEKN 630
KLATQL GP+MPV+ K AR IT++EKN
Sbjct: 2 KLATQLTGPVMPVRNVYKKEKARVITEEEKN 32
>AB033111-1|BAA86599.1| 785|Homo sapiens KIAA1285 protein protein.
Length = 785
Score = 31.1 bits (67), Expect = 3.4
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -2
Query: 43 SLERPPPRWSSSF 5
S ERPPPRWSSSF
Sbjct: 770 SRERPPPRWSSSF 782
>BC005882-1|AAH05882.1| 285|Homo sapiens vacuolar protein sorting
37 homolog B (S. cerevisiae) protein.
Length = 285
Score = 30.3 bits (65), Expect = 5.9
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -2
Query: 136 GIHIIPLPI*KNLPTSQ*SPRAEFRSPGDPTSLERPPPR 20
G+ PLP LPT Q ++F SP P +RPPPR
Sbjct: 237 GLQCPPLPPRVGLPTQQ-GFSSQFVSPYPPPLPQRPPPR 274
>AK022812-1|BAB14255.1| 285|Homo sapiens protein ( Homo sapiens
cDNA FLJ12750 fis, clone NT2RP2001168, weakly similar to
VERPROLIN. ).
Length = 285
Score = 30.3 bits (65), Expect = 5.9
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -2
Query: 136 GIHIIPLPI*KNLPTSQ*SPRAEFRSPGDPTSLERPPPR 20
G+ PLP LPT Q ++F SP P +RPPPR
Sbjct: 237 GLQCPPLPPRVGLPTQQ-GFSSQFVSPYPPPLPQRPPPR 274
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,618,465
Number of Sequences: 237096
Number of extensions: 1921075
Number of successful extensions: 4332
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4317
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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