Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_K02
(607 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73098-10|CAA97336.2| 391|Caenorhabditis elegans Hypothetical p... 37 0.013
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 33 0.16
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 33 0.16
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 33 0.21
U40954-8|AAM69083.2| 471|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z82286-4|CAB05310.1| 468|Caenorhabditis elegans Hypothetical pr... 29 2.6
U97009-3|AAC69031.1| 619|Caenorhabditis elegans Hypothetical pr... 29 2.6
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 29 2.6
U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily ass... 29 3.4
U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily ass... 29 3.4
U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily ass... 29 3.4
U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily ass... 29 3.4
AF125463-1|AAD12861.2| 263|Caenorhabditis elegans Hypothetical ... 29 3.4
AF100305-4|AAC68916.2| 426|Caenorhabditis elegans Hypothetical ... 29 3.4
AF100305-3|AAL65795.1| 426|Caenorhabditis elegans Hypothetical ... 29 3.4
AF047660-1|AAC04431.1| 900|Caenorhabditis elegans Osm-9 and cap... 29 3.4
Z32683-10|CAA83625.1| 381|Caenorhabditis elegans Hypothetical p... 28 5.9
AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm rec... 28 5.9
AF038608-10|AAC25814.2| 327|Caenorhabditis elegans Serpentine r... 28 5.9
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 27 7.9
Z74032-2|CAA98466.2| 248|Caenorhabditis elegans Hypothetical pr... 27 7.9
AC024839-3|AAF60829.1| 308|Caenorhabditis elegans T box family ... 27 7.9
AC024839-2|AAF60830.1| 308|Caenorhabditis elegans Hypothetical ... 27 7.9
>Z73098-10|CAA97336.2| 391|Caenorhabditis elegans Hypothetical
protein T21C9.9 protein.
Length = 391
Score = 36.7 bits (81), Expect = 0.013
Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Frame = +1
Query: 289 TWVQPLSPNVSP---TIRY-QYMYSPYES-HKTYQLQAPQYSQPEVPIHQNMAPIPISIP 453
T+ + L+P P T Y QY P +S + YQL P+Y QP+ P Q ++ P P
Sbjct: 58 TFYRDLTPFRQPYYQTASYPQYQQGPAQSLQQMYQLPNPRYIQPQAPRPQYISR-PAPRP 116
Query: 454 AGASLTPVSLQHVQLVPCMCPVA--PEEAEKLQEQSGAGPYVAQT 582
A A P +Q V PVA E + +G G + +T
Sbjct: 117 APAPYQPPRVQERPYVQPAAPVAELAETRKNTLHDNGYGEEIERT 161
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 33.1 bits (72), Expect = 0.16
Identities = 34/115 (29%), Positives = 46/115 (40%)
Frame = +1
Query: 259 SDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPI 438
S S P+S P+SP+ SPT YSP + +Y +P YS P P + +
Sbjct: 1593 SPSYSPTSPAAGQSPVSPSYSPT---SPSYSP--TSPSYSPTSPSYS-PTSPSYSPTS-- 1644
Query: 439 PISIPAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQSGAGPYVAQTYSQASYT 603
P P S +P S + P P +P + S P TYS S T
Sbjct: 1645 PSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSP----TYSPTSPT 1695
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 33.1 bits (72), Expect = 0.16
Identities = 34/115 (29%), Positives = 46/115 (40%)
Frame = +1
Query: 259 SDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPI 438
S S P+S P+SP+ SPT YSP + +Y +P YS P P + +
Sbjct: 1600 SPSYSPTSPAAGQSPVSPSYSPT---SPSYSP--TSPSYSPTSPSYS-PTSPSYSPTS-- 1651
Query: 439 PISIPAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQSGAGPYVAQTYSQASYT 603
P P S +P S + P P +P + S P TYS S T
Sbjct: 1652 PSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSP----TYSPTSPT 1702
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 32.7 bits (71), Expect = 0.21
Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 3/89 (3%)
Frame = +1
Query: 268 APPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVP---IHQNMAPI 438
AP + VQP+ P V P Q + P E + Q+P QP VP I AP
Sbjct: 1472 APVAPVAQPVQPIQP-VQPVQSVQSLPQPAEIPRVVVPQSPGTPQPVVPQVSIVTPQAPQ 1530
Query: 439 PISIPAGASLTPVSLQHVQLVPCMCPVAP 525
P + AS P++ + P P
Sbjct: 1531 PTAAATSASTGPIAPEPTTAAPTTTETTP 1559
>U40954-8|AAM69083.2| 471|Caenorhabditis elegans Hypothetical
protein ZK813.5 protein.
Length = 471
Score = 30.3 bits (65), Expect = 1.1
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Frame = +1
Query: 259 SDSAPPSSQKTWV-----QPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQ 423
SD +P SS T V + SP+ + + ++P S +Y+ P E +
Sbjct: 345 SDVSPASSVMTVVGGENGPRIKSEASPSYQLRPNWNPSPSVTSYESDPPSSVTQETNLPI 404
Query: 424 NMAPIPISIPAGASLTP 474
P P+S+PA A+ TP
Sbjct: 405 TSIP-PVSVPASANCTP 420
>Z82286-4|CAB05310.1| 468|Caenorhabditis elegans Hypothetical
protein W02A2.7 protein.
Length = 468
Score = 29.1 bits (62), Expect = 2.6
Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 10/115 (8%)
Frame = +1
Query: 280 SQKTWVQPLSPNVS--PTI---RYQYMYS---PYESHKTYQLQ--APQYSQPEVPIHQNM 429
S T PL P S P I + QY ++ P + TY Q + Q P P +Q+
Sbjct: 16 SPTTTQPPLPPGQSSHPQIYDQQMQYYFAAAMPNQPMATYAAQNGSSQQYAPAAPYYQDA 75
Query: 430 APIPISIPAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQSGAGPYVAQTYSQA 594
+ +PA S+ P V P + P++ + QSG + S A
Sbjct: 76 NGQYVQVPANGSMAPQQHMMVSGQPYLYMAQPQQGAQQVMQSGQPQLIYYQQSMA 130
>U97009-3|AAC69031.1| 619|Caenorhabditis elegans Hypothetical
protein T19H12.6 protein.
Length = 619
Score = 29.1 bits (62), Expect = 2.6
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 7/60 (11%)
Frame = +1
Query: 193 MMSFLVILAIVASSDAFFLKWGSDSAPPS--SQKTW----VQPLSPNVSP-TIRYQYMYS 351
++ F+VILA+V AFFL S+ S S +T+ +Q +SP+ SP T R ++ S
Sbjct: 104 LVQFIVILALVLGLIAFFLTRSESSSTTSEYSTRTYQNFELQTISPSSSPLTFRRRFKTS 163
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 29.1 bits (62), Expect = 2.6
Identities = 25/87 (28%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Frame = +1
Query: 349 SPYESHKTYQLQAPQYSQPEVPIHQNMAP-IPISIPAGASLTPVSLQHVQLVPCMCPVAP 525
+P + + AP + E P A P S PA A TP + P P AP
Sbjct: 670 TPAPAPAAEETPAPAQAAEETPAPAPAAEETPASAPA-AEETPAPAPAAEEAPAPAPAAP 728
Query: 526 EEAEKLQEQSGA-GPYVAQTYSQASYT 603
E E + A P V+ Y A T
Sbjct: 729 ETPAPAAEGAAAPAPIVSSGYDAAQST 755
>U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform c protein.
Length = 484
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +1
Query: 262 DSAPPSSQKTWVQPLSPNVSP---TIRYQYMY-SPYESHKTYQLQAPQYSQPEVPIHQNM 429
D +P S T + + P+++P + + + P+ Q A Q+ P VP H+ +
Sbjct: 164 DLSPTSRDSTQFEQI-PSIAPEESAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQHKIV 222
Query: 430 APIPIS 447
P+PIS
Sbjct: 223 QPVPIS 228
>U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform d protein.
Length = 799
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +1
Query: 262 DSAPPSSQKTWVQPLSPNVSP---TIRYQYMY-SPYESHKTYQLQAPQYSQPEVPIHQNM 429
D +P S T + + P+++P + + + P+ Q A Q+ P VP H+ +
Sbjct: 164 DLSPTSRDSTQFEQI-PSIAPEESAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQHKIV 222
Query: 430 APIPIS 447
P+PIS
Sbjct: 223 QPVPIS 228
>U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform a protein.
Length = 1091
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +1
Query: 262 DSAPPSSQKTWVQPLSPNVSP---TIRYQYMY-SPYESHKTYQLQAPQYSQPEVPIHQNM 429
D +P S T + + P+++P + + + P+ Q A Q+ P VP H+ +
Sbjct: 164 DLSPTSRDSTQFEQI-PSIAPEESAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQHKIV 222
Query: 430 APIPIS 447
P+PIS
Sbjct: 223 QPVPIS 228
>U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform b protein.
Length = 1107
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +1
Query: 262 DSAPPSSQKTWVQPLSPNVSP---TIRYQYMY-SPYESHKTYQLQAPQYSQPEVPIHQNM 429
D +P S T + + P+++P + + + P+ Q A Q+ P VP H+ +
Sbjct: 164 DLSPTSRDSTQFEQI-PSIAPEESAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQHKIV 222
Query: 430 APIPIS 447
P+PIS
Sbjct: 223 QPVPIS 228
>AF125463-1|AAD12861.2| 263|Caenorhabditis elegans Hypothetical
protein Y49F6C.6 protein.
Length = 263
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +1
Query: 259 SDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQ---YSQPEVP 414
++S P S QKT Q +PT+ QY+YS + Y P+ QP+ P
Sbjct: 60 NNSKPISLQKTKTQFFLNYSNPTVLLQYLYSTTTVPRPYPTTNPKLISLQQPKTP 114
>AF100305-4|AAC68916.2| 426|Caenorhabditis elegans Hypothetical
protein W04B5.3a protein.
Length = 426
Score = 28.7 bits (61), Expect = 3.4
Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Frame = +1
Query: 274 PSSQKTWVQPLSPNVSPTIRY----QYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAP-I 438
PS T P S N +P I Q ++ Q P Y+ Q MA +
Sbjct: 295 PSVPYTVTYPQSANSTPGIPQPLPQQMSRQQAPIYQNQQQMPPGYNPYLQQQQQQMAATV 354
Query: 439 PISIPAGASLTPVSLQHVQLVPCMCPVAP 525
P+ P+GA+ PVS Q+V V P
Sbjct: 355 PMPYPSGAAAVPVSAMAPQVVQYPTTVVP 383
>AF100305-3|AAL65795.1| 426|Caenorhabditis elegans Hypothetical
protein W04B5.3b protein.
Length = 426
Score = 28.7 bits (61), Expect = 3.4
Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Frame = +1
Query: 274 PSSQKTWVQPLSPNVSPTIRY----QYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAP-I 438
PS T P S N +P I Q ++ Q P Y+ Q MA +
Sbjct: 295 PSVPYTVTYPQSANSTPGIPQPLPQQMSRQQAPIYQNQQQMPPGYNPYLQQQQQQMAATV 354
Query: 439 PISIPAGASLTPVSLQHVQLVPCMCPVAP 525
P+ P+GA+ PVS Q+V V P
Sbjct: 355 PMPYPSGAAAVPVSAMAPQVVQYPTTVVP 383
>AF047660-1|AAC04431.1| 900|Caenorhabditis elegans Osm-9 and
capsaicin receptor-relatedprotein 2 protein.
Length = 900
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 415 IHQNMAPIPISIPAGASLTPVSLQHVQLVPCMCPVAPEEA-EKLQEQSGAGPYVAQTYSQ 591
IH+NMA +++ GASL V+ Q + + +A +E +++ E G + S
Sbjct: 307 IHENMAMFKLALECGASLRTVNKQSLSPLTLAAKLAKKEMFDEILELEGDSVWAYGDASS 366
Query: 592 ASY 600
+Y
Sbjct: 367 TAY 369
>Z32683-10|CAA83625.1| 381|Caenorhabditis elegans Hypothetical
protein R07E5.3 protein.
Length = 381
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 361 SHKTYQLQAPQYSQPEVP-IHQNMAPIPISIPAGASLTPVSLQHVQLVPCMCPVA 522
S + Y+ S P + +A P + AG +T S H++ VPC CP+A
Sbjct: 94 SEEKYRAAGAAPSTPRTEGASRTVAKTPATGWAGQQVTSGS-HHLESVPCSCPIA 147
>AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm
receptor protein 82 protein.
Length = 362
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 428 WLLYLSVFLPERALPRYLCSTFNSYHVCVQ*LLKRQKNYR 547
+LLY + F+ + L + L TF S C+Q +L Q YR
Sbjct: 73 YLLYTTQFVEYQLLSQILIVTFCSIFACMQVVLSTQFIYR 112
>AF038608-10|AAC25814.2| 327|Caenorhabditis elegans Serpentine
receptor, class z protein78 protein.
Length = 327
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 407 KFRSTKIWLLYLSVFLPERALPRYLCSTFNS 499
K + IW LYL F+ E AL C+T ++
Sbjct: 152 KLMAKHIWYLYLVCFIKELALAIIFCTTIST 182
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 27.5 bits (58), Expect = 7.9
Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 11/119 (9%)
Frame = +1
Query: 268 APPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAP---QYSQPEVP---IHQNM 429
APP++Q+ V +P P + +P K QAP + P P Q+
Sbjct: 64 APPAAQQIPVVQQAPPAQPAQQKPVAQAPPAQAKPTVQQAPILVAQAPPNPPAPQAQQHQ 123
Query: 430 APIPIS---IPAGASLTPVSLQ-HVQLVP-CMCPVAPEEAEKLQEQSGAGPYVAQTYSQ 591
AP P + IP PV Q Q P + P +A+ + +Q+ A P V + +Q
Sbjct: 124 APAPPAARQIPVQQPPKPVVQQAPAQQAPKSVAQAPPAQAKPIVQQAQAQPVVQKAPTQ 182
>Z74032-2|CAA98466.2| 248|Caenorhabditis elegans Hypothetical
protein F35B12.3 protein.
Length = 248
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 384 STAILSARSSDPPKYGSYTYQYSCRSEPYP 473
S IL+A +YG+Y QYS +S+ YP
Sbjct: 10 SCGILAAAYPYSQQYGNYDQQYSQQSQYYP 39
>AC024839-3|AAF60829.1| 308|Caenorhabditis elegans T box family
protein 30 protein.
Length = 308
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +1
Query: 301 PLSPNVSPTIRYQY---MYSPYESHKTYQLQAPQYSQPEVPIHQNMAP 435
P SP S +YQY YSP++S Y YS P Q+ +P
Sbjct: 249 PSSPLYSSQNQYQYPFHPYSPFDSSIPYPYSPMDYSYYFNPTFQSFSP 296
>AC024839-2|AAF60830.1| 308|Caenorhabditis elegans Hypothetical
protein Y59E9AR.5 protein.
Length = 308
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +1
Query: 301 PLSPNVSPTIRYQY---MYSPYESHKTYQLQAPQYSQPEVPIHQNMAP 435
P SP S +YQY YSP++S Y YS P Q+ +P
Sbjct: 249 PSSPLYSSQNQYQYPFHPYSPFDSSIPYPYSPMDYSYYFNPTFQSFSP 296
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,854,541
Number of Sequences: 27780
Number of extensions: 327548
Number of successful extensions: 1017
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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