Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_J24
(534 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D26598-1|BAA05645.1| 205|Homo sapiens proteasome subunit HsC10-... 232 5e-61
BC013008-1|AAH13008.1| 205|Homo sapiens proteasome (prosome, ma... 232 5e-61
BC002570-1|AAH02570.1| 205|Homo sapiens proteasome (prosome, ma... 232 5e-61
DQ120692-1|ABB92464.1| 204|Homo sapiens rcPSMB3 protein. 194 1e-49
D00761-1|BAA00658.1| 241|Homo sapiens proteasome subunit C5 pro... 78 2e-14
BT019720-1|AAV38525.1| 241|Homo sapiens proteasome (prosome, ma... 78 2e-14
BC020807-1|AAH20807.1| 241|Homo sapiens proteasome (prosome, ma... 78 2e-14
BC000508-1|AAH00508.1| 241|Homo sapiens proteasome (prosome, ma... 78 2e-14
AL031259-8|CAA20287.1| 241|Homo sapiens proteasome (prosome, ma... 78 2e-14
AL008628-2|CAI19555.1| 241|Homo sapiens proteasome (prosome, ma... 78 2e-14
AK223193-1|BAD96913.1| 241|Homo sapiens proteasome beta 1 subun... 78 2e-14
AB209078-1|BAD92315.1| 196|Homo sapiens proteasome beta 1 subun... 78 2e-14
D26599-1|BAA05646.1| 201|Homo sapiens proteasome subunit HsC7-I... 36 0.068
CR456862-1|CAG33143.1| 201|Homo sapiens PSMB2 protein. 36 0.068
BT007137-1|AAP35801.1| 201|Homo sapiens proteasome (prosome, ma... 36 0.068
BC107901-1|AAI07902.1| 201|Homo sapiens proteasome (prosome, ma... 36 0.068
BC105126-1|AAI05127.1| 201|Homo sapiens proteasome (prosome, ma... 36 0.068
BC101836-1|AAI01837.1| 201|Homo sapiens proteasome (prosome, ma... 36 0.068
AL357035-1|CAI22074.1| 201|Homo sapiens proteasome (prosome, ma... 36 0.068
AL354864-3|CAC36031.2| 201|Homo sapiens proteasome (prosome, ma... 36 0.068
AL157951-2|CAI23521.1| 201|Homo sapiens proteasome (prosome, ma... 36 0.068
AB209470-1|BAD92707.1| 249|Homo sapiens proteasome beta 2 subun... 36 0.068
>D26598-1|BAA05645.1| 205|Homo sapiens proteasome subunit HsC10-II
protein.
Length = 205
Score = 232 bits (568), Expect = 5e-61
Identities = 104/149 (69%), Positives = 127/149 (85%)
Frame = +1
Query: 88 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 267
MSI++YNGGAV+AMKG++CVAIA D+RFGIQAQ V+T+F K+F MG LY+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQLVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 268 QTVLQRLKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPY 447
QTV QRLKFR+NLYELKE R +KP T +M++NLLYEKRFGPY+ EPVIAGLDP P+
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 448 VCNMDLIGCPNEPEDFVVSGTCSEQLYGM 534
+C++DLIGCP +DFVVSGTC+EQ+YGM
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGM 149
>BC013008-1|AAH13008.1| 205|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 3 protein.
Length = 205
Score = 232 bits (568), Expect = 5e-61
Identities = 104/149 (69%), Positives = 127/149 (85%)
Frame = +1
Query: 88 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 267
MSI++YNGGAV+AMKG++CVAIA D+RFGIQAQ V+T+F K+F MG LY+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 268 QTVLQRLKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPY 447
QTV QRLKFR+NLYELKE R +KP T +M++NLLYEKRFGPY+ EPVIAGLDP P+
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 448 VCNMDLIGCPNEPEDFVVSGTCSEQLYGM 534
+C++DLIGCP +DFVVSGTC+EQ+YGM
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGM 149
>BC002570-1|AAH02570.1| 205|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 3 protein.
Length = 205
Score = 232 bits (568), Expect = 5e-61
Identities = 104/149 (69%), Positives = 127/149 (85%)
Frame = +1
Query: 88 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 267
MSI++YNGGAV+AMKG++CVAIA D+RFGIQAQ V+T+F K+F MG LY+GL GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 268 QTVLQRLKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPY 447
QTV QRLKFR+NLYELKE R +KP T +M++NLLYEKRFGPY+ EPVIAGLDP P+
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 448 VCNMDLIGCPNEPEDFVVSGTCSEQLYGM 534
+C++DLIGCP +DFVVSGTC+EQ+YGM
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGM 149
>DQ120692-1|ABB92464.1| 204|Homo sapiens rcPSMB3 protein.
Length = 204
Score = 194 bits (474), Expect = 1e-49
Identities = 89/149 (59%), Positives = 119/149 (79%)
Frame = +1
Query: 88 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 267
MSI++YNGGA++AMKG++ VAIA D+ FGIQAQ V+T+F ++F MG LY+GL GLATD
Sbjct: 1 MSIMSYNGGAIMAMKGKNRVAIAADRHFGIQAQMVTTDFQEIFPMGGWLYIGLAGLATDV 60
Query: 268 QTVLQRLKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPY 447
Q V Q LKF++NLYELKE + +KP TF++M++N LYEK FGPY+ +PVIAGLD P+
Sbjct: 61 QRVAQCLKFQLNLYELKEGQQIKPYTFTSMVANFLYEKHFGPYYTDPVIAGLDLKTFKPF 120
Query: 448 VCNMDLIGCPNEPEDFVVSGTCSEQLYGM 534
C++DLIG P +DFVV+G+ +EQ+YGM
Sbjct: 121 SCSLDLIGFPMVTDDFVVNGSYAEQMYGM 149
>D00761-1|BAA00658.1| 241|Homo sapiens proteasome subunit C5
protein.
Length = 241
Score = 77.8 bits (183), Expect = 2e-14
Identities = 41/147 (27%), Positives = 75/147 (51%)
Frame = +1
Query: 85 KMSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATD 264
+ S +NGG ++A+ G+D +A+D R + + PK +++ +G G D
Sbjct: 29 RFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGD 88
Query: 265 TQTVLQRLKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTP 444
T+ + ++ R+ +Y+ N+ M +AMLS +LY +RF PY++ +I GLD +
Sbjct: 89 CLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE-EGKG 147
Query: 445 YVCNMDLIGCPNEPEDFVVSGTCSEQL 525
V + D +G + + F G+ S L
Sbjct: 148 AVYSFDPVG-SYQRDSFKAGGSASAML 173
>BT019720-1|AAV38525.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 77.8 bits (183), Expect = 2e-14
Identities = 41/147 (27%), Positives = 75/147 (51%)
Frame = +1
Query: 85 KMSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATD 264
+ S +NGG ++A+ G+D +A+D R + + PK +++ +G G D
Sbjct: 29 RFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGD 88
Query: 265 TQTVLQRLKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTP 444
T+ + ++ R+ +Y+ N+ M +AMLS +LY +RF PY++ +I GLD +
Sbjct: 89 CLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE-EGKG 147
Query: 445 YVCNMDLIGCPNEPEDFVVSGTCSEQL 525
V + D +G + + F G+ S L
Sbjct: 148 AVYSFDPVG-SYQRDSFKAGGSASAML 173
>BC020807-1|AAH20807.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 77.8 bits (183), Expect = 2e-14
Identities = 41/147 (27%), Positives = 75/147 (51%)
Frame = +1
Query: 85 KMSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATD 264
+ S +NGG ++A+ G+D +A+D R + + PK +++ +G G D
Sbjct: 29 RFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGD 88
Query: 265 TQTVLQRLKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTP 444
T+ + ++ R+ +Y+ N+ M +AMLS +LY +RF PY++ +I GLD +
Sbjct: 89 CLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE-EGKG 147
Query: 445 YVCNMDLIGCPNEPEDFVVSGTCSEQL 525
V + D +G + + F G+ S L
Sbjct: 148 AVYSFDPVG-SYQRDSFKAGGSASAML 173
>BC000508-1|AAH00508.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 77.8 bits (183), Expect = 2e-14
Identities = 41/147 (27%), Positives = 75/147 (51%)
Frame = +1
Query: 85 KMSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATD 264
+ S +NGG ++A+ G+D +A+D R + + PK +++ +G G D
Sbjct: 29 RFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGD 88
Query: 265 TQTVLQRLKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTP 444
T+ + ++ R+ +Y+ N+ M +AMLS +LY +RF PY++ +I GLD +
Sbjct: 89 CLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE-EGKG 147
Query: 445 YVCNMDLIGCPNEPEDFVVSGTCSEQL 525
V + D +G + + F G+ S L
Sbjct: 148 AVYSFDPVG-SYQRDSFKAGGSASAML 173
>AL031259-8|CAA20287.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 77.8 bits (183), Expect = 2e-14
Identities = 41/147 (27%), Positives = 75/147 (51%)
Frame = +1
Query: 85 KMSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATD 264
+ S +NGG ++A+ G+D +A+D R + + PK +++ +G G D
Sbjct: 29 RFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGD 88
Query: 265 TQTVLQRLKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTP 444
T+ + ++ R+ +Y+ N+ M +AMLS +LY +RF PY++ +I GLD +
Sbjct: 89 CLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE-EGKG 147
Query: 445 YVCNMDLIGCPNEPEDFVVSGTCSEQL 525
V + D +G + + F G+ S L
Sbjct: 148 AVYSFDPVG-SYQRDSFKAGGSASAML 173
>AL008628-2|CAI19555.1| 241|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 1 protein.
Length = 241
Score = 77.8 bits (183), Expect = 2e-14
Identities = 41/147 (27%), Positives = 75/147 (51%)
Frame = +1
Query: 85 KMSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATD 264
+ S +NGG ++A+ G+D +A+D R + + PK +++ +G G D
Sbjct: 29 RFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGD 88
Query: 265 TQTVLQRLKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTP 444
T+ + ++ R+ +Y+ N+ M +AMLS +LY +RF PY++ +I GLD +
Sbjct: 89 CLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE-EGKG 147
Query: 445 YVCNMDLIGCPNEPEDFVVSGTCSEQL 525
V + D +G + + F G+ S L
Sbjct: 148 AVYSFDPVG-SYQRDSFKAGGSASAML 173
>AK223193-1|BAD96913.1| 241|Homo sapiens proteasome beta 1 subunit
variant protein.
Length = 241
Score = 77.8 bits (183), Expect = 2e-14
Identities = 41/147 (27%), Positives = 75/147 (51%)
Frame = +1
Query: 85 KMSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATD 264
+ S +NGG ++A+ G+D +A+D R + + PK +++ +G G D
Sbjct: 29 RFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYRLTDKTVIGCSGFHGD 88
Query: 265 TQTVLQRLKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTP 444
T+ + ++ R+ +Y+ N+ M +AMLS +LY +RF PY++ +I GLD +
Sbjct: 89 CLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE-EGKG 147
Query: 445 YVCNMDLIGCPNEPEDFVVSGTCSEQL 525
V + D +G + + F G+ S L
Sbjct: 148 AVYSFDPVG-SYQRDSFKAGGSASAML 173
>AB209078-1|BAD92315.1| 196|Homo sapiens proteasome beta 1 subunit
variant protein.
Length = 196
Score = 77.8 bits (183), Expect = 2e-14
Identities = 41/147 (27%), Positives = 75/147 (51%)
Frame = +1
Query: 85 KMSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATD 264
+ S +NGG ++A+ G+D +A+D R + + PK +++ +G G D
Sbjct: 34 RFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGD 93
Query: 265 TQTVLQRLKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTP 444
T+ + ++ R+ +Y+ N+ M +AMLS +LY +RF PY++ +I GLD +
Sbjct: 94 CLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE-EGKG 152
Query: 445 YVCNMDLIGCPNEPEDFVVSGTCSEQL 525
V + D +G + + F G+ S L
Sbjct: 153 AVYSFDPVG-SYQRDSFKAGGSASAML 178
>D26599-1|BAA05646.1| 201|Homo sapiens proteasome subunit HsC7-I
protein.
Length = 201
Score = 36.3 bits (80), Expect = 0.068
Identities = 24/119 (20%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +1
Query: 118 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVLQRLKFR 297
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 298 MNLYELKENRIMKPKTFSAMLSNLLYE--KRFGPYFIEPVIAGLDPYDNTPYVCNMDLI 468
+ LY+++ + P + L + + PY + ++AG D ++ P + MD +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEG-PALYYMDYL 121
>CR456862-1|CAG33143.1| 201|Homo sapiens PSMB2 protein.
Length = 201
Score = 36.3 bits (80), Expect = 0.068
Identities = 24/119 (20%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +1
Query: 118 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVLQRLKFR 297
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 298 MNLYELKENRIMKPKTFSAMLSNLLYE--KRFGPYFIEPVIAGLDPYDNTPYVCNMDLI 468
+ LY+++ + P + L + + PY + ++AG D ++ P + MD +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEG-PALYYMDYL 121
>BT007137-1|AAP35801.1| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 36.3 bits (80), Expect = 0.068
Identities = 24/119 (20%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +1
Query: 118 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVLQRLKFR 297
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 298 MNLYELKENRIMKPKTFSAMLSNLLYE--KRFGPYFIEPVIAGLDPYDNTPYVCNMDLI 468
+ LY+++ + P + L + + PY + ++AG D ++ P + MD +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEG-PALYYMDYL 121
>BC107901-1|AAI07902.1| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 36.3 bits (80), Expect = 0.068
Identities = 24/119 (20%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +1
Query: 118 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVLQRLKFR 297
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 298 MNLYELKENRIMKPKTFSAMLSNLLYE--KRFGPYFIEPVIAGLDPYDNTPYVCNMDLI 468
+ LY+++ + P + L + + PY + ++AG D ++ P + MD +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEG-PALYYMDYL 121
>BC105126-1|AAI05127.1| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 36.3 bits (80), Expect = 0.068
Identities = 24/119 (20%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +1
Query: 118 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVLQRLKFR 297
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 298 MNLYELKENRIMKPKTFSAMLSNLLYE--KRFGPYFIEPVIAGLDPYDNTPYVCNMDLI 468
+ LY+++ + P + L + + PY + ++AG D ++ P + MD +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEG-PALYYMDYL 121
>BC101836-1|AAI01837.1| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 36.3 bits (80), Expect = 0.068
Identities = 24/119 (20%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +1
Query: 118 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVLQRLKFR 297
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 298 MNLYELKENRIMKPKTFSAMLSNLLYE--KRFGPYFIEPVIAGLDPYDNTPYVCNMDLI 468
+ LY+++ + P + L + + PY + ++AG D ++ P + MD +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEG-PALYYMDYL 121
>AL357035-1|CAI22074.1| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 36.3 bits (80), Expect = 0.068
Identities = 24/119 (20%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +1
Query: 118 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVLQRLKFR 297
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 298 MNLYELKENRIMKPKTFSAMLSNLLYE--KRFGPYFIEPVIAGLDPYDNTPYVCNMDLI 468
+ LY+++ + P + L + + PY + ++AG D ++ P + MD +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEG-PALYYMDYL 121
>AL354864-3|CAC36031.2| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 36.3 bits (80), Expect = 0.068
Identities = 24/119 (20%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +1
Query: 118 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVLQRLKFR 297
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 298 MNLYELKENRIMKPKTFSAMLSNLLYE--KRFGPYFIEPVIAGLDPYDNTPYVCNMDLI 468
+ LY+++ + P + L + + PY + ++AG D ++ P + MD +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEG-PALYYMDYL 121
>AL157951-2|CAI23521.1| 201|Homo sapiens proteasome (prosome,
macropain) subunit, beta type, 2 protein.
Length = 201
Score = 36.3 bits (80), Expect = 0.068
Identities = 24/119 (20%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +1
Query: 118 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVLQRLKFR 297
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 298 MNLYELKENRIMKPKTFSAMLSNLLYE--KRFGPYFIEPVIAGLDPYDNTPYVCNMDLI 468
+ LY+++ + P + L + + PY + ++AG D ++ P + MD +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEG-PALYYMDYL 121
>AB209470-1|BAD92707.1| 249|Homo sapiens proteasome beta 2 subunit
variant protein.
Length = 249
Score = 36.3 bits (80), Expect = 0.068
Identities = 24/119 (20%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +1
Query: 118 VVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVLQRLKFR 297
++ ++G D V +A+D+ + + K+F+M + + G A DT + ++
Sbjct: 36 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 95
Query: 298 MNLYELKENRIMKPKTFSAMLSNLLYE--KRFGPYFIEPVIAGLDPYDNTPYVCNMDLI 468
+ LY+++ + P + L + + PY + ++AG D ++ P + MD +
Sbjct: 96 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEG-PALYYMDYL 153
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,551,113
Number of Sequences: 237096
Number of extensions: 1873008
Number of successful extensions: 3273
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3273
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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