Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_J22
(625 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061519-1|AAL29067.1| 250|Drosophila melanogaster LD47508p pro... 79 5e-15
AE014297-1684|AAF54945.2| 250|Drosophila melanogaster CG9796-PA... 79 5e-15
AY051550-1|AAK92974.1| 213|Drosophila melanogaster GH19763p pro... 71 1e-12
AE014297-988|AAF54414.1| 213|Drosophila melanogaster CG9427-PA ... 71 1e-12
AY095188-1|AAM12281.1| 207|Drosophila melanogaster LD22034p pro... 64 2e-10
AE014297-3350|AAF56157.1| 207|Drosophila melanogaster CG10157-P... 64 2e-10
AY071032-1|AAL48654.1| 216|Drosophila melanogaster RE11385p pro... 57 2e-08
AE014297-3349|AAF56156.1| 216|Drosophila melanogaster CG13822-P... 57 2e-08
AE014297-2581|AAF55595.1| 2404|Drosophila melanogaster CG14299-P... 29 3.9
X68309-2|CAA48386.1| 802|Drosophila melanogaster ERCC3 protein. 29 6.8
S50517-1|AAA12421.1| 802|Drosophila melanogaster ERCC3Dm protein. 29 6.8
L02965-1|AAA74931.1| 801|Drosophila melanogaster helicase protein. 29 6.8
BT025199-1|ABF17890.1| 798|Drosophila melanogaster FI01118p pro... 29 6.8
AY051975-1|AAK93399.1| 798|Drosophila melanogaster LD44022p pro... 29 6.8
AE014296-1828|AAF50150.1| 798|Drosophila melanogaster CG8019-PA... 29 6.8
AE014134-2863|AAF53626.1| 4010|Drosophila melanogaster CG5526-PA... 28 8.9
>AY061519-1|AAL29067.1| 250|Drosophila melanogaster LD47508p
protein.
Length = 250
Score = 79.0 bits (186), Expect = 5e-15
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = +3
Query: 378 KVKVRVYYEALCPDSKHFFIKHLEPVTE-KLSEFLSVTLVPYGKAKTKFHDGKYYFTCQH 554
KV + +YYE+LCPDS F + + P + +L + + +T VP+GK++ + FTC H
Sbjct: 24 KVPISIYYESLCPDSAKFITEQVYPAVKGELRDVVELTFVPFGKSQFVTQGSEVTFTCHH 83
Query: 555 GEVECYANKIHACSID 602
G ECY NK+HAC+I+
Sbjct: 84 GPNECYGNKVHACAIE 99
>AE014297-1684|AAF54945.2| 250|Drosophila melanogaster CG9796-PA
protein.
Length = 250
Score = 79.0 bits (186), Expect = 5e-15
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = +3
Query: 378 KVKVRVYYEALCPDSKHFFIKHLEPVTE-KLSEFLSVTLVPYGKAKTKFHDGKYYFTCQH 554
KV + +YYE+LCPDS F + + P + +L + + +T VP+GK++ + FTC H
Sbjct: 24 KVPISIYYESLCPDSAKFITEQVYPAVKGELRDVVELTFVPFGKSQFVTQGSEVTFTCHH 83
Query: 555 GEVECYANKIHACSID 602
G ECY NK+HAC+I+
Sbjct: 84 GPNECYGNKVHACAIE 99
>AY051550-1|AAK92974.1| 213|Drosophila melanogaster GH19763p
protein.
Length = 213
Score = 71.3 bits (167), Expect = 1e-12
Identities = 30/84 (35%), Positives = 55/84 (65%)
Frame = +3
Query: 363 KHKQDKVKVRVYYEALCPDSKHFFIKHLEPVTEKLSEFLSVTLVPYGKAKTKFHDGKYYF 542
K + +K+ + + YE+LCPDS++F + L PV E+ +++ + LVP+GK++++ + F
Sbjct: 29 KRQSNKLHITLLYESLCPDSRNF-MHQLGPVYEEFGDYIDILLVPFGKSQSERNGA--IF 85
Query: 543 TCQHGEVECYANKIHACSIDALNN 614
CQHG EC N++ +C I++ N
Sbjct: 86 HCQHGPAECKGNRLQSCVINSTAN 109
>AE014297-988|AAF54414.1| 213|Drosophila melanogaster CG9427-PA
protein.
Length = 213
Score = 71.3 bits (167), Expect = 1e-12
Identities = 30/84 (35%), Positives = 55/84 (65%)
Frame = +3
Query: 363 KHKQDKVKVRVYYEALCPDSKHFFIKHLEPVTEKLSEFLSVTLVPYGKAKTKFHDGKYYF 542
K + +K+ + + YE+LCPDS++F + L PV E+ +++ + LVP+GK++++ + F
Sbjct: 29 KRQSNKLHITLLYESLCPDSRNF-MHQLGPVYEEFGDYIDILLVPFGKSQSERNGA--IF 85
Query: 543 TCQHGEVECYANKIHACSIDALNN 614
CQHG EC N++ +C I++ N
Sbjct: 86 HCQHGPAECKGNRLQSCVINSTAN 109
>AY095188-1|AAM12281.1| 207|Drosophila melanogaster LD22034p
protein.
Length = 207
Score = 63.7 bits (148), Expect = 2e-10
Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +3
Query: 354 RFNKHKQDKVKVRVYYEALCPDSKHFFIKHLEP--VTEKLSEFLSVTLVPYGKAKTKFHD 527
R + D++ + +YYEALCP F L P V + F +TLVPYG A+T D
Sbjct: 21 RLRGPQADRLAITLYYEALCPYCMEFVTTQLNPSMVRQDRLPFTDLTLVPYGNARTN-DD 79
Query: 528 GKYYFTCQHGEVECYANKIHACSID 602
G CQHG +EC N HAC ++
Sbjct: 80 GN--VECQHGVMECELNAWHACILE 102
>AE014297-3350|AAF56157.1| 207|Drosophila melanogaster CG10157-PA
protein.
Length = 207
Score = 63.7 bits (148), Expect = 2e-10
Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +3
Query: 354 RFNKHKQDKVKVRVYYEALCPDSKHFFIKHLEP--VTEKLSEFLSVTLVPYGKAKTKFHD 527
R + D++ + +YYEALCP F L P V + F +TLVPYG A+T D
Sbjct: 21 RLRGPQADRLAITLYYEALCPYCMEFVTTQLNPSMVRQDRLPFTDLTLVPYGNARTN-DD 79
Query: 528 GKYYFTCQHGEVECYANKIHACSID 602
G CQHG +EC N HAC ++
Sbjct: 80 GN--VECQHGVMECELNAWHACILE 102
>AY071032-1|AAL48654.1| 216|Drosophila melanogaster RE11385p
protein.
Length = 216
Score = 56.8 bits (131), Expect = 2e-08
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Frame = +3
Query: 372 QDKVKVRVYYEALCPDSKHFFIKHLEPVTEKLSEFLSVT---LVPYGKAK--TKFHDGKY 536
+ ++ V ++YEALCPDS F + L + +++ SVT L P+GKA G+
Sbjct: 28 ESRLLVAIHYEALCPDSMSFIRRRLYDALQD-NDWWSVTDLKLYPFGKAGFYNNTSTGES 86
Query: 537 YFTCQHGEVECYANKIHACSIDALN 611
CQHG EC N +HAC I+ L+
Sbjct: 87 QVFCQHGVDECELNALHACIIETLD 111
>AE014297-3349|AAF56156.1| 216|Drosophila melanogaster CG13822-PA
protein.
Length = 216
Score = 56.8 bits (131), Expect = 2e-08
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Frame = +3
Query: 372 QDKVKVRVYYEALCPDSKHFFIKHLEPVTEKLSEFLSVT---LVPYGKAK--TKFHDGKY 536
+ ++ V ++YEALCPDS F + L + +++ SVT L P+GKA G+
Sbjct: 28 ESRLLVAIHYEALCPDSMSFIRRRLYDALQD-NDWWSVTDLKLYPFGKAGFYNNTSTGES 86
Query: 537 YFTCQHGEVECYANKIHACSIDALN 611
CQHG EC N +HAC I+ L+
Sbjct: 87 QVFCQHGVDECELNALHACIIETLD 111
>AE014297-2581|AAF55595.1| 2404|Drosophila melanogaster CG14299-PA,
isoform A protein.
Length = 2404
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 113 IMDTKFYDNILSLIKTQPVQIGTKKTYFLFCSLLFP 6
++DT+ + +L I QPV+ KKT L + FP
Sbjct: 1080 LVDTRIFPELLRQISAQPVEAALKKTISLSKTSAFP 1115
>X68309-2|CAA48386.1| 802|Drosophila melanogaster ERCC3 protein.
Length = 802
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 453 VTEKLSEFLSVTLVPYGKAKTKFHDGKYYFTCQHGEV 563
+ E + EF+ + + YGK K KY+ H EV
Sbjct: 158 IPEGILEFIRLCTLSYGKVKLVLKHNKYFIESPHPEV 194
>S50517-1|AAA12421.1| 802|Drosophila melanogaster ERCC3Dm protein.
Length = 802
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 453 VTEKLSEFLSVTLVPYGKAKTKFHDGKYYFTCQHGEV 563
+ E + EF+ + + YGK K KY+ H EV
Sbjct: 158 IPEGILEFIRLCTLSYGKVKLVLKHNKYFIESPHPEV 194
>L02965-1|AAA74931.1| 801|Drosophila melanogaster helicase protein.
Length = 801
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 453 VTEKLSEFLSVTLVPYGKAKTKFHDGKYYFTCQHGEV 563
+ E + EF+ + + YGK K KY+ H EV
Sbjct: 158 IPEGILEFIRLCTLSYGKVKLVLKHNKYFIESPHPEV 194
>BT025199-1|ABF17890.1| 798|Drosophila melanogaster FI01118p
protein.
Length = 798
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 453 VTEKLSEFLSVTLVPYGKAKTKFHDGKYYFTCQHGEV 563
+ E + EF+ + + YGK K KY+ H EV
Sbjct: 158 IPEGILEFIRLCTLSYGKVKLVLKHNKYFIESPHPEV 194
>AY051975-1|AAK93399.1| 798|Drosophila melanogaster LD44022p
protein.
Length = 798
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 453 VTEKLSEFLSVTLVPYGKAKTKFHDGKYYFTCQHGEV 563
+ E + EF+ + + YGK K KY+ H EV
Sbjct: 158 IPEGILEFIRLCTLSYGKVKLVLKHNKYFIESPHPEV 194
>AE014296-1828|AAF50150.1| 798|Drosophila melanogaster CG8019-PA
protein.
Length = 798
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 453 VTEKLSEFLSVTLVPYGKAKTKFHDGKYYFTCQHGEV 563
+ E + EF+ + + YGK K KY+ H EV
Sbjct: 158 IPEGILEFIRLCTLSYGKVKLVLKHNKYFIESPHPEV 194
>AE014134-2863|AAF53626.1| 4010|Drosophila melanogaster CG5526-PA
protein.
Length = 4010
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 316 QRLSLTYWNWKMIDLINTNKTKSK*GCIMKLCVLTLN 426
Q +SLTYW ++ + + + K ++ CVL +N
Sbjct: 1152 QSISLTYWTLEITECFESEEPKENLAKYLQKCVLQIN 1188
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,839,549
Number of Sequences: 53049
Number of extensions: 465989
Number of successful extensions: 950
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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