BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_J17
(528 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 28 0.068
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 27 0.12
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 27 0.12
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 27 0.12
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 27 0.12
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 27 0.12
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 27 0.12
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 27 0.12
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 27 0.12
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 27 0.12
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 27 0.12
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 27 0.12
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 27 0.12
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 27 0.12
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 27 0.12
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 27 0.12
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 26 0.21
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 26 0.21
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 26 0.21
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 26 0.21
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 26 0.21
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 26 0.21
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 26 0.21
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 26 0.21
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 25 0.48
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 25 0.63
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 25 0.63
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 24 1.1
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 24 1.1
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 24 1.1
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 24 1.1
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 23 1.9
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 23 1.9
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 5.9
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 5.9
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 21 7.8
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 7.8
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 27.9 bits (59), Expect = 0.068
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 140 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 271
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYEIRRIREI 72
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 27.1 bits (57), Expect = 0.12
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 140 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 271
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 27.1 bits (57), Expect = 0.12
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 140 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 271
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 27.1 bits (57), Expect = 0.12
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 140 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 271
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 27.1 bits (57), Expect = 0.12
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 140 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 271
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 27.1 bits (57), Expect = 0.12
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 140 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 271
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 27.1 bits (57), Expect = 0.12
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 140 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 271
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 27.1 bits (57), Expect = 0.12
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 140 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 271
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 27.1 bits (57), Expect = 0.12
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 140 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 271
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 27.1 bits (57), Expect = 0.12
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 140 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 271
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 27.1 bits (57), Expect = 0.12
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 140 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 271
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 27.1 bits (57), Expect = 0.12
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 140 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 271
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 27.1 bits (57), Expect = 0.12
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 140 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 271
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 27.1 bits (57), Expect = 0.12
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 140 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 271
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 27.1 bits (57), Expect = 0.12
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 140 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 271
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 27.1 bits (57), Expect = 0.12
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 140 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 271
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 26.2 bits (55), Expect = 0.21
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 140 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 271
TK ++LQ E +Q+E ++ +R +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREVWLIQQEREREHERLMKKMIL--EYELRRIREI 72
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 26.2 bits (55), Expect = 0.21
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 140 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 271
TK ++LQ E +Q+E ++ +R +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREVWLIQQEREREHERLMKKMIL--EYELRRIREI 72
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 26.2 bits (55), Expect = 0.21
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 140 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 271
TK ++LQ E +Q+E ++ +R +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREVWLIQQEREREHERLMKKMIL--EYELRRIREI 72
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 26.2 bits (55), Expect = 0.21
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 140 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 271
TK ++LQ E +Q+E ++ +R +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREVWLIQQEREREHERLMKKMIL--EYELRRIREI 72
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 26.2 bits (55), Expect = 0.21
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 140 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 271
TK ++LQ E +Q+E ++ +R +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREVWLIQQEREREHERLMKKMIL--EYELRRIREI 72
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 26.2 bits (55), Expect = 0.21
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 140 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 271
TK ++LQ E +Q+E ++ +R +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREVWLIQQEREREHERLMKKMIL--EYELRRIREI 72
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 26.2 bits (55), Expect = 0.21
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 140 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 271
TK ++LQ E +Q+E ++ +R +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREVWLIQQEREREHERLMKKMIL--EYELRRIREI 72
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 26.2 bits (55), Expect = 0.21
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 140 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 271
TK ++LQ E +Q+E ++ +R +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREVWLIQQEREREHERLMKKMIL--EYELRRIREI 72
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 25.0 bits (52), Expect = 0.48
Identities = 10/47 (21%), Positives = 26/47 (55%)
Frame = +2
Query: 155 LQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFL 295
L+ + + E + +K +RN+K + + E K +++ +++G F+
Sbjct: 421 LRELTQVTEEKPRVMKMGKRNIKAQVKRFRMETKAAKTLGIIVGGFI 467
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 24.6 bits (51), Expect = 0.63
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 137 YTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLH 238
+ +YKKLQ E+Q +K E N+ K Y +
Sbjct: 431 FLRYKKLQPQYSQSELQMPGVKFESVNIDKLYTY 464
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 24.6 bits (51), Expect = 0.63
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 137 YTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLH 238
+ +YKKLQ E+Q +K E N+ K Y +
Sbjct: 431 FLRYKKLQPQYSQSELQMPGVKFESVNIDKLYTY 464
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 125 SEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQE 247
S D +Y+K R E L +EE + E+R +K Y ++E
Sbjct: 5 SRDRNREYRKKDRQYEKLCNEEEKLL-EERTSRKRYSRSRE 44
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 125 SEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQE 247
S D +Y+K R E L +EE + E+R +K Y ++E
Sbjct: 5 SRDRNREYRKKDRQYEKLCNEEEKLL-EERTSRKRYSRSRE 44
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 125 SEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQE 247
S D +Y+K R E L +EE + E+R +K Y ++E
Sbjct: 5 SRDRNREYRKKDRQYEKLCNEEEKLL-EERTSRKRYSRSRE 44
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 125 SEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQE 247
S D +Y+K R E L +EE + E+R +K Y ++E
Sbjct: 5 SRDRNREYRKKDRQYEKLCNEEEKLL-EERTSRKRYSRSRE 44
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 23.0 bits (47), Expect = 1.9
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 321 LWAALQDLITMHAFYPQLIENS*NHQR 401
+WA + LI + FY +L+ + NH++
Sbjct: 226 IWAYVIPLIFIILFYSRLLSSIRNHEK 252
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 23.0 bits (47), Expect = 1.9
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 321 LWAALQDLITMHAFYPQLIENS*NHQR 401
+WA + LI + FY +L+ + NH++
Sbjct: 226 IWAYVIPLIFIILFYSRLLSSIRNHEK 252
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.4 bits (43), Expect = 5.9
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +2
Query: 194 YIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFL 295
Y ++ K+E A++E K +++ +V+G FL
Sbjct: 596 YKANKASKKKREKSSAKKERKATKTLAIVLGVFL 629
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.4 bits (43), Expect = 5.9
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 147 YFVYKSSDSNSSN 109
YF KS+ SNSSN
Sbjct: 142 YFYSKSNGSNSSN 154
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.0 bits (42), Expect = 7.8
Identities = 8/35 (22%), Positives = 17/35 (48%)
Frame = -1
Query: 522 PPISEYCTSGFSSACNIEMELSASGGRTSTSAFEC 418
PP+ ++ +S S+ C+ +GG + +C
Sbjct: 278 PPVKQHRSSSASTTCSGHTVRCFTGGPRKSHESQC 312
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.0 bits (42), Expect = 7.8
Identities = 9/28 (32%), Positives = 11/28 (39%)
Frame = -3
Query: 385 EFSINCG*NACIVIRSCSAAHNPCVLVN 302
E S N C+ +R C H P N
Sbjct: 94 ELSPNSTIAVCVCMRKCPRRHRPVCASN 121
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,840
Number of Sequences: 438
Number of extensions: 3996
Number of successful extensions: 38
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -