Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_J13
(491 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 31 0.12
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 27 1.2
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 27 1.2
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 27 1.5
SPBC31F10.14c |hip3|hir3|HIRA interacting protein Hip3|Schizosac... 27 2.0
SPAC1F7.08 |fio1||iron transport multicopper oxidase Fio1|Schizo... 26 2.7
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 26 2.7
SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyce... 26 3.5
SPCC1753.03c |rec7||meiotic recombination protein Rec7 |Schizosa... 26 3.5
SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase Nak1|Schizosacch... 26 3.5
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 26 3.5
SPCC622.16c |epe1||Jmjc domain chromatin associated protein Epe1... 25 4.7
SPBC530.05 |||transcription factor |Schizosaccharomyces pombe|ch... 25 6.2
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 6.2
SPBC776.13 |cnd1||condensin subunit Cnd1|Schizosaccharomyces pom... 25 6.2
SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr 1|||M... 25 6.2
SPAC24H6.02c |||TIM23 translocase complex subunit Tim15|Schizosa... 25 6.2
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 25 8.2
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 25 8.2
SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|... 25 8.2
SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription fact... 25 8.2
SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux transporte... 25 8.2
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 30.7 bits (66), Expect = 0.12
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = -3
Query: 255 PTNIYDNKVTTSLT-NNSVQYVHNHSTIKSSTPI-GRALYVETDYAPYIVHVQRIESTSN 82
PT Y N +LT N+S + H +T++S + GR + V + + P+I R S S
Sbjct: 94 PTMSYTNHSPANLTRNSSFNHQHYSTTLRSPPSMRGRGIDVNSSHYPHISR-PRTSSDSQ 152
Query: 81 DGTTLHPVTFGKFLKSNGIHNITNAS 4
T PV + ++ +NI S
Sbjct: 153 KMYTRAPVDYYYIQENPYFNNIDQDS 178
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 27.5 bits (58), Expect = 1.2
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = -3
Query: 390 RIHLQKMCKSCNKRKR--NNSSLHENKCTDCECMDSEIITNDINISQPTNIYDNKVTTSL 217
R HL+ MC + +RK +NSS + + + + + + ++ N N +N T +
Sbjct: 492 RRHLEAMCGATVERKEGGSNSSSNISNVANFDSAEDDNDNDNDNDRDSNNNNNNNNTNTD 551
Query: 216 TNNSVQYVHNHSTIK 172
++ + Y+ H +K
Sbjct: 552 DDDKLAYLELHEALK 566
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase
Tlh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1919
Score = 27.5 bits (58), Expect = 1.2
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = -3
Query: 390 RIHLQKMCKSCNKRKR--NNSSLHENKCTDCECMDSEIITNDINISQPTNIYDNKVTTSL 217
R HL+ MC + +RK +NSS + + + + + + ++ N N +N T +
Sbjct: 492 RRHLEAMCGATVERKEGGSNSSSNISNVANFDSAEDDNDNDNDNDRDSNNNNNNNNTNTD 551
Query: 216 TNNSVQYVHNHSTIK 172
++ + Y+ H +K
Sbjct: 552 DDDKLAYLELHEALK 566
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 27.1 bits (57), Expect = 1.5
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = -3
Query: 273 DINISQPTNIYDNKVTTSLTNNSVQYVHNHSTIKSSTPIGRALYVETDYAP 121
D ++ + IYD+ T+++ ++S Y + + S++ V T Y P
Sbjct: 500 DTSVQTSSAIYDSSSTSNIQSSSSVYASSTGALSSNSLSSSTSSVSTSYIP 550
>SPBC31F10.14c |hip3|hir3|HIRA interacting protein
Hip3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1630
Score = 26.6 bits (56), Expect = 2.0
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -3
Query: 414 WSQSRPKKRIHLQKMCKSCNKRKRNNSSLHENKCTDCECMDSEI 283
W R ++ L+ +CK NN+ ++ NKC E ++ +I
Sbjct: 985 WVMPRSDQKNALEIICKVIRFPGENNADVYFNKCAIKEFLERDI 1028
>SPAC1F7.08 |fio1||iron transport multicopper oxidase
Fio1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 622
Score = 26.2 bits (55), Expect = 2.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 234 KVTTSLTNNSVQYVHNHSTIKSSTP 160
K+T SL NN +H+H + TP
Sbjct: 71 KMTNSLANNRTTSLHSHGLFQKFTP 95
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 26.2 bits (55), Expect = 2.7
Identities = 15/67 (22%), Positives = 33/67 (49%)
Frame = -3
Query: 231 VTTSLTNNSVQYVHNHSTIKSSTPIGRALYVETDYAPYIVHVQRIESTSNDGTTLHPVTF 52
++ S+++ S+Q V N+ +STP+ + + P + S+S+ + HP +
Sbjct: 239 LSNSVSSPSIQ-VSNNQNANNSTPLSFHAPIPPLHVPAVPLTSASHSSSDGKSRKHPSPY 297
Query: 51 GKFLKSN 31
+L S+
Sbjct: 298 KPYLNSS 304
>SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1131
Score = 25.8 bits (54), Expect = 3.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 366 KSCNKRKRNNSSLHENKCTDCECMDSEIITNDINIS 259
K N R RN SSL EN + D+ +T+D I+
Sbjct: 750 KKENNRIRNASSLMENPRVSTKTFDNFTLTHDSTIN 785
>SPCC1753.03c |rec7||meiotic recombination protein Rec7
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 339
Score = 25.8 bits (54), Expect = 3.5
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = -3
Query: 375 KMCKSCNKRKR-NNSSLHENKCTDCECMDSEIITNDIN----ISQPTNIYDNKVTTSLTN 211
K KS +++K+ NNS N + M++ + + QP+ I + T+ N
Sbjct: 119 KDAKSSSEKKQFNNSQSQSNNSQELSLMNNAYNKSSAQQPNLLLQPSYIPMTQTATTAVN 178
Query: 210 NSVQYVH 190
NS YV+
Sbjct: 179 NSTNYVN 185
>SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase
Nak1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 25.8 bits (54), Expect = 3.5
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 387 CVSLVLTETMMHLNLYKNHLILHQSVYSCDYL 482
C+SL+L ET+ L + I+H+ + + + L
Sbjct: 109 CISLILRETLQALKFIHHAGIIHRDIKAANIL 140
>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1576
Score = 25.8 bits (54), Expect = 3.5
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Frame = -3
Query: 357 NKRKRNNSSLHENKCTD------CECMDSEIITNDINISQPTNIYDNKVTTSLTNNSVQY 196
N+RKRN S L + D + +D+ D+ + ++ D K N++
Sbjct: 1426 NERKRNESMLQSKRILDSAQQDVAKFVDTSQSNLDVQLISLKDVNDRKYKWKHKQNAMNK 1485
Query: 195 VHN--HSTIKSSTPIGRALYVETD 130
V++ S I+ S+ AL V+ D
Sbjct: 1486 VYDLVQSAIRESSEDAIALAVDCD 1509
>SPCC622.16c |epe1||Jmjc domain chromatin associated protein
Epe1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 948
Score = 25.4 bits (53), Expect = 4.7
Identities = 13/52 (25%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = -3
Query: 465 IPIDVKSDDSCIDSDASWSQSRPKKRIHLQKM---CKSCNKRKRNNSSLHEN 319
+ +D + D+ + S++Q +R + K C S N+R++ + +LH+N
Sbjct: 86 VSVDTEFQDTYLLDAPSFAQPHFSERQSVDKTRSRCLSRNRRRKRHPNLHKN 137
>SPBC530.05 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 25.0 bits (52), Expect = 6.2
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = -3
Query: 270 INISQPTNIYDNKVTTSLTNNSVQYVHNHSTIKSST 163
+ + P++I+DN + NNS+ +H + S+T
Sbjct: 644 VKSNSPSSIFDNSGYLNSLNNSILQMHQNLQNSSNT 679
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.0 bits (52), Expect = 6.2
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -3
Query: 90 TSNDGTTLHPVTFGKFLKSNGIHNITNAS 4
T+ D TT+ P TF S+G ++N +
Sbjct: 951 TTGDLTTIDPTTFTSTYLSSGFQTVSNTT 979
>SPBC776.13 |cnd1||condensin subunit Cnd1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1158
Score = 25.0 bits (52), Expect = 6.2
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -3
Query: 363 SCNKRKRNNSSLHENKCTDCECMDSEIITNDINISQP-TNIYDNKVTTSLTNNSVQYVHN 187
S + R + L N ++ ++ I N + + P TN+ + LT NS+ +
Sbjct: 71 SSSVRNKVYDLLTSNISSESAILEDMISANATDFTVPQTNLETTGIAFQLTVNSLSSSNQ 130
Query: 186 HSTIKSST 163
S I+SST
Sbjct: 131 LSVIRSST 138
>SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1115
Score = 25.0 bits (52), Expect = 6.2
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 13/82 (15%)
Frame = -3
Query: 453 VKSDDSCIDSDASWSQSRPKKRIHL----QKMC-----KSCNKRKRNNSS----LHENKC 313
+ D CID A + QSR + + QK+ + + K N S + N+
Sbjct: 120 ISRDSDCIDYRAMFYQSRNNPEVVIGGYHQKLTVVNAERGISIHKDKNVSDIFIMRRNRL 179
Query: 312 TDCECMDSEIITNDINISQPTN 247
C + EII D N QP N
Sbjct: 180 LCCGSTNGEIILRDPNSFQPVN 201
>SPAC24H6.02c |||TIM23 translocase complex subunit
Tim15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 175
Score = 25.0 bits (52), Expect = 6.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 456 DVKSDDSCIDSDASWSQSRPKKRIHLQKMCKSCNKRKRNNSS 331
D+ S + SDA Q +PK ++ C CN R +N S
Sbjct: 55 DLASGVPSVKSDAD--QLQPKPTYNVSFTCTVCNTRSNHNFS 94
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 24.6 bits (51), Expect = 8.2
Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -3
Query: 399 PKKRIHLQKM-CKSCNKRKRNNSSLHENKCTDCECMDSEIITNDINISQPTNIYDNKV 229
P +R+ L ++ CK C + + LHE+ + M + + ++ + S +YD V
Sbjct: 2058 PSRRLSLDQIPCKQCGVHQDFDLCLHEHLWPTRDDMGTLVFSDGWSCSSCNLVYDRWV 2115
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 24.6 bits (51), Expect = 8.2
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -3
Query: 294 DSEIITNDINISQPTNIYDNKVTTSLTNNSVQYVHNHSTIKSSTPIGRALYVET 133
D ++ + N + P YDN T NN Y N + K+ P+ +++ +T
Sbjct: 381 DRRNVSRNSNNNSPEG-YDNNRTNPTVNNLPSYPTNLARPKAIKPMPTSIHGQT 433
>SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|chr
3|||Manual
Length = 828
Score = 24.6 bits (51), Expect = 8.2
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +3
Query: 369 TSFVSVCVSLVLTETMMHLNLYKNHLILHQSVYSC 473
+S ++C+ ++ E ++ +L K +L+ S+Y C
Sbjct: 187 SSIRNICIKILDGEEVVPSSLQKKAAVLYASLYRC 221
>SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription factor
Grt1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 648
Score = 24.6 bits (51), Expect = 8.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3
Query: 396 KKRIHLQKMCKSCNKRKRNNSSLHENKCTDCE 301
K+ + + K C++C KRK S + C +C+
Sbjct: 5 KRPVRISKACENCRKRKVKCSG--GDVCFECQ 34
>SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 531
Score = 24.6 bits (51), Expect = 8.2
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 289 RVHTFTISAFIFMQ*TIISFSFITTLAH 372
R I+ F FM I+SF+ +T+ H
Sbjct: 356 RYRNLVIAGFFFMLMGIVSFAVLTSFGH 383
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,887,895
Number of Sequences: 5004
Number of extensions: 36764
Number of successful extensions: 161
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 192109570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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