Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_J12
(592 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82274-1|CAB05226.1| 165|Caenorhabditis elegans Hypothetical pr... 182 2e-46
Z82274-14|CAJ76933.1| 50|Caenorhabditis elegans Hypothetical p... 66 1e-11
Z48230-4|CAO78721.1| 484|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z48230-3|CAA88263.1| 515|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z48006-7|CAO78729.1| 484|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z48006-6|CAA88051.1| 515|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z70034-12|CAA93859.1| 235|Caenorhabditis elegans Hypothetical p... 27 7.5
Z68318-9|CAA92698.1| 235|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z81486-10|CAB03993.3| 681|Caenorhabditis elegans Hypothetical p... 27 10.0
>Z82274-1|CAB05226.1| 165|Caenorhabditis elegans Hypothetical
protein JC8.3a protein.
Length = 165
Score = 182 bits (442), Expect = 2e-46
Identities = 81/125 (64%), Positives = 106/125 (84%)
Frame = +2
Query: 218 SPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKN 397
SPKK+G+DIAKAT DWKGLK+T +L +QNR A+I VVPSAA+LI++ LKEPPRDRKK KN
Sbjct: 38 SPKKIGEDIAKATQDWKGLKVTCKLTIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKN 97
Query: 398 IKHHGNITMEDVLGIAKIMRSRSMARYLSSSVKEILGTAQSVGCTVEGSGPHDIIDDINS 577
+KH+G++T++ ++ IA+IMR RSMA+ L +VKEILGTAQSVGCT++G PHDII+ I +
Sbjct: 98 VKHNGDLTVDTIIKIARIMRPRSMAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESIAN 157
Query: 578 GALTI 592
G + I
Sbjct: 158 GEIEI 162
>Z82274-14|CAJ76933.1| 50|Caenorhabditis elegans Hypothetical
protein JC8.3c protein.
Length = 50
Score = 66.5 bits (155), Expect = 1e-11
Identities = 30/47 (63%), Positives = 37/47 (78%)
Frame = +2
Query: 452 MRSRSMARYLSSSVKEILGTAQSVGCTVEGSGPHDIIDDINSGALTI 592
MR RSMA+ L +VKEILGTAQSVGCT++G PHDII+ I +G + I
Sbjct: 1 MRPRSMAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESIANGEIEI 47
>Z48230-4|CAO78721.1| 484|Caenorhabditis elegans Hypothetical
protein F19C6.4b protein.
Length = 484
Score = 28.7 bits (61), Expect = 3.3
Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 2/128 (1%)
Frame = +2
Query: 146 PANTSSDYLHNKFYHVINSNFASQSPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISV 325
PAN YL+N VI N +Q K + D I T + I ++ S
Sbjct: 295 PANDGFQYLNNNHITVITRNDLNQPEKAIADTIFVTTHE-----IMHRVYPYGNFLMNSN 349
Query: 326 VPSAAALIIRALKEPPRDRKKQKNIK--HHGNITMEDVLGIAKIMRSRSMARYLSSSVKE 499
V +AA R + D K I + ++ EDV+ I + MA S++ K+
Sbjct: 350 VTTAALQCARREVQMLGDTDAVKPISGWFNKDVAHEDVVNIMAMRMIMKMATIKSTNEKQ 409
Query: 500 ILGTAQSV 523
+ +++
Sbjct: 410 LKEALETI 417
>Z48230-3|CAA88263.1| 515|Caenorhabditis elegans Hypothetical
protein F19C6.4a protein.
Length = 515
Score = 28.7 bits (61), Expect = 3.3
Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 2/128 (1%)
Frame = +2
Query: 146 PANTSSDYLHNKFYHVINSNFASQSPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISV 325
PAN YL+N VI N +Q K + D I T + I ++ S
Sbjct: 295 PANDGFQYLNNNHITVITRNDLNQPEKAIADTIFVTTHE-----IMHRVYPYGNFLMNSN 349
Query: 326 VPSAAALIIRALKEPPRDRKKQKNIK--HHGNITMEDVLGIAKIMRSRSMARYLSSSVKE 499
V +AA R + D K I + ++ EDV+ I + MA S++ K+
Sbjct: 350 VTTAALQCARREVQMLGDTDAVKPISGWFNKDVAHEDVVNIMAMRMIMKMATIKSTNEKQ 409
Query: 500 ILGTAQSV 523
+ +++
Sbjct: 410 LKEALETI 417
>Z48006-7|CAO78729.1| 484|Caenorhabditis elegans Hypothetical
protein F19C6.4b protein.
Length = 484
Score = 28.7 bits (61), Expect = 3.3
Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 2/128 (1%)
Frame = +2
Query: 146 PANTSSDYLHNKFYHVINSNFASQSPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISV 325
PAN YL+N VI N +Q K + D I T + I ++ S
Sbjct: 295 PANDGFQYLNNNHITVITRNDLNQPEKAIADTIFVTTHE-----IMHRVYPYGNFLMNSN 349
Query: 326 VPSAAALIIRALKEPPRDRKKQKNIK--HHGNITMEDVLGIAKIMRSRSMARYLSSSVKE 499
V +AA R + D K I + ++ EDV+ I + MA S++ K+
Sbjct: 350 VTTAALQCARREVQMLGDTDAVKPISGWFNKDVAHEDVVNIMAMRMIMKMATIKSTNEKQ 409
Query: 500 ILGTAQSV 523
+ +++
Sbjct: 410 LKEALETI 417
>Z48006-6|CAA88051.1| 515|Caenorhabditis elegans Hypothetical
protein F19C6.4a protein.
Length = 515
Score = 28.7 bits (61), Expect = 3.3
Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 2/128 (1%)
Frame = +2
Query: 146 PANTSSDYLHNKFYHVINSNFASQSPKKVGDDIAKATSDWKGLKITVQLIVQNRQAQISV 325
PAN YL+N VI N +Q K + D I T + I ++ S
Sbjct: 295 PANDGFQYLNNNHITVITRNDLNQPEKAIADTIFVTTHE-----IMHRVYPYGNFLMNSN 349
Query: 326 VPSAAALIIRALKEPPRDRKKQKNIK--HHGNITMEDVLGIAKIMRSRSMARYLSSSVKE 499
V +AA R + D K I + ++ EDV+ I + MA S++ K+
Sbjct: 350 VTTAALQCARREVQMLGDTDAVKPISGWFNKDVAHEDVVNIMAMRMIMKMATIKSTNEKQ 409
Query: 500 ILGTAQSV 523
+ +++
Sbjct: 410 LKEALETI 417
>Z70034-12|CAA93859.1| 235|Caenorhabditis elegans Hypothetical
protein C18E9.10 protein.
Length = 235
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 6 RLPTRRXLPGGGWKEPATQDPMPVSLSRLLRML 104
+LP R GW P+TQD ++R R++
Sbjct: 65 QLPASRNRKSSGWFSPSTQDESMFGMTRTQRII 97
>Z68318-9|CAA92698.1| 235|Caenorhabditis elegans Hypothetical
protein C18E9.10 protein.
Length = 235
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 6 RLPTRRXLPGGGWKEPATQDPMPVSLSRLLRML 104
+LP R GW P+TQD ++R R++
Sbjct: 65 QLPASRNRKSSGWFSPSTQDESMFGMTRTQRII 97
>Z81486-10|CAB03993.3| 681|Caenorhabditis elegans Hypothetical
protein C53A5.13 protein.
Length = 681
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 423 MVIFPWCLMFFCFLRS 376
+VIF CL+ FCFLR+
Sbjct: 613 LVIFLMCLLVFCFLRN 628
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,352,483
Number of Sequences: 27780
Number of extensions: 258262
Number of successful extensions: 539
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 539
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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