Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_J05
         (367 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   2.0  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   2.0  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    21   6.0  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    21   6.0  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   6.0  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   6.0  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    20   8.0  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 300 CLYSNALNLTVSTE 259
           CL+ N +NLT  TE
Sbjct: 532 CLFGNTVNLTSRTE 545


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 300 CLYSNALNLTVSTE 259
           CL+ N +NLT  TE
Sbjct: 532 CLFGNTVNLTSRTE 545


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 214 GGLSWETSDKELRD 255
           GG+ WE  +KE+ D
Sbjct: 100 GGIFWEGLEKEVGD 113


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 217 GLSWETSDKELRDHF 261
           G+S ET  K + DHF
Sbjct: 155 GMSKETQQKLIDDHF 169


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 217 GLSWETSDKELRDHF 261
           G+S ET  K + DHF
Sbjct: 171 GMSKETQQKLIDDHF 185


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 81  SHDLYYLNT 55
           SH LYY+NT
Sbjct: 270 SHGLYYVNT 278


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 229 ETSDKELRDHFSAYGEIESITVKTDP 306
           E+ DKE   H    G ++ +  +TDP
Sbjct: 694 ESDDKEGYLHSVVSGALDRLHYETDP 719


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,231
Number of Sequences: 438
Number of extensions: 2192
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)