Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_J04
         (304 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   1.4  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   2.5  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   2.5  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   3.3  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    21   3.3  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    21   3.3  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    21   3.3  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    21   3.3  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   3.3  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   4.4  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   4.4  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    20   5.8  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              20   7.7  
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    20   7.7  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    20   7.7  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 204 YNQLYLREVLTPEIFSTVLGAP 269
           YN  + R  +TPE++S  L  P
Sbjct: 242 YNTKFFRYRITPELYSEHLVVP 263


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 52  QL*HSPSFWQYLKLVPVYAVTSVILNKIQDV 144
           +L H    W +    P Y    VILNK  D+
Sbjct: 515 RLDHGRKTWTFCG-TPEYVAPEVILNKGHDI 544


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 5   EVRLYPSKIKHGKNNYS 55
           ++ LYPS+  HG + Y+
Sbjct: 791 DIALYPSQTTHGYDIYA 807


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 23  SKIKHGKNNYSYN 61
           +K  H  NNY YN
Sbjct: 87  NKTIHNNNNYKYN 99


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 23  SKIKHGKNNYSYN 61
           +K  H  NNY YN
Sbjct: 87  NKTIHNNNNYKYN 99


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 23  SKIKHGKNNYSYN 61
           +K  H  NNY YN
Sbjct: 87  NKTIHNNNNYKYN 99


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 23  SKIKHGKNNYSYN 61
           +K  H  NNY YN
Sbjct: 87  NKTIHNNNNYKYN 99


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 23  SKIKHGKNNYSYN 61
           +K  H  NNY YN
Sbjct: 87  NKTIHNNNNYKYN 99


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 23  SKIKHGKNNYSYN 61
           +K  H  NNY YN
Sbjct: 320 NKTIHNNNNYKYN 332


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 4.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 69  FLLAVFEIGTCLRCYQCNSQQDP 137
           F LA + + TC +C++  +  DP
Sbjct: 366 FRLAFWRL-TCRKCFKSRTNLDP 387


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 20.6 bits (41), Expect = 4.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 141 ILDLVENYTGNSVNRYQFQI 82
           ILDLV N+T +    +Q  I
Sbjct: 115 ILDLVPNHTSDQHKWFQMSI 134


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = +2

Query: 35  HGKNNYSYN 61
           H  NNY YN
Sbjct: 91  HNNNNYKYN 99


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 183 GTQDAINYNQLYLREVLTPEIF 248
           G  D  N+N++ +RE+   EIF
Sbjct: 72  GYDDGGNFNEVVIREI--AEIF 91


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 17  YPSKIKHGKNNYSYNTRL 70
           Y S I +  NN +YN +L
Sbjct: 89  YISNISNYNNNNNYNKKL 106


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 17  YPSKIKHGKNNYSYNTRL 70
           Y S I +  NN +YN +L
Sbjct: 327 YISNISNYNNNNNYNKKL 344


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,204
Number of Sequences: 438
Number of extensions: 2111
Number of successful extensions: 19
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6368931
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)