Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_J02
(592 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 54 6e-08
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 54 6e-08
L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin pro... 45 5e-05
AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin (... 45 5e-05
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z50756-4|CAA90639.1| 482|Caenorhabditis elegans Hypothetical pr... 31 0.61
Z50741-5|CAA90612.1| 482|Caenorhabditis elegans Hypothetical pr... 31 0.61
U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z74032-1|CAA98465.3| 342|Caenorhabditis elegans Hypothetical pr... 29 2.5
U58739-1|AAB00607.1| 392|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81540-11|CAB04397.2| 191|Caenorhabditis elegans Hypothetical p... 28 4.3
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 28 4.3
U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crum... 28 4.3
Z81540-10|CAB04398.1| 354|Caenorhabditis elegans Hypothetical p... 28 5.7
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z81069-1|CAB02990.1| 359|Caenorhabditis elegans Hypothetical pr... 27 7.5
AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlec... 27 7.5
Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical pr... 27 10.0
U55854-5|AAA98014.1| 103|Caenorhabditis elegans Hypothetical pr... 27 10.0
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 27 10.0
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 27 10.0
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 27 10.0
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 27 10.0
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 54.4 bits (125), Expect = 6e-08
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Frame = +3
Query: 39 CDRMTCYFGAHCLIR--SG--LATCECSASECP----PTDTLPVCGSDSRTYVSTCHLRA 194
C+ + C G C++ +G LA C C ++CP ++ PVC S Y S+CHLR
Sbjct: 218 CEDLRCGPGEDCVVNQINGILLAKCVCP-TQCPNYGDSVESSPVCSSHGVDYQSSCHLRH 276
Query: 195 HACRAQADVVVQAFGPC 245
HAC ++ ++ V+ FG C
Sbjct: 277 HACESKTNITVKFFGRC 293
Score = 52.0 bits (119), Expect = 3e-07
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +3
Query: 30 ATNCDRMTCYFGAHCLIRSGLATCECSASECPPTDTLPVCGSDSRTYVSTCHLRAHACRA 209
A C++ C FG+ C +++G+ CEC A TD VCGSD +Y S CHL +C
Sbjct: 142 AAICEQSLCPFGSKCGLKTGV--CECKARCRVVTDV--VCGSDHVSYSSFCHLSVRSCVL 197
Query: 210 QADVV---VQAFGPCSNETP 260
+ V V GPC P
Sbjct: 198 AKNGVRLRVATKGPCKKRNP 217
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = +3
Query: 102 ECSASECPPTDTLPVCGSDSRTYVSTCHLRAHACRAQADVVVQAFGPC 245
EC SE ++ VCG+D +TY++ C L+ AC+ Q D++V G C
Sbjct: 316 ECKCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNC 363
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = +3
Query: 54 CYFGAHCLIRSGLATCECSASECPPTDTLPVCGSDSRTYVSTCHLRAHACRAQADVVV 227
CYFGA C C+ C + P+CGSD Y + CHL +CR Q ++ V
Sbjct: 670 CYFGATC------HNWACTCPTCNLSSNYPICGSDGIVYNNQCHLNTISCRDQREIHV 721
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +3
Query: 39 CDRMTCYFGAHCLIRSG-LATCECSASECPPTDTLPVCGSDSRTYVSTCHLRAHACRAQA 215
C++M C F C+++ A CEC + C PVC ++ T+ + C ++ +C ++
Sbjct: 370 CEKMECGFWGSCVVKPDRTAECECP-NRCEDV-MRPVCATNGETFDNECEMKKKSCETKS 427
Query: 216 DVVVQAFGPC 245
+ V+ G C
Sbjct: 428 MIKVKHQGTC 437
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +3
Query: 54 CYFGAHCLI-RSGLATCECSASECPPTDT---LPVCGSDSRTYVSTCHLRAHACRAQADV 221
C F + C++ + A C+C +CP + VCG+D TY S CH++ AC Q+
Sbjct: 518 CDFYSACVVGENEKAECKCP-DDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACH-QSKF 575
Query: 222 VVQAFGPCSNETPHV 266
V+ AF +E HV
Sbjct: 576 VMTAFEGKCDECLHV 590
Score = 40.7 bits (91), Expect = 8e-04
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 72 CLIRSGLATCECSASECPPTDTLP-VCGSDSRTYVSTCHLRAHACRAQADVVVQAFGPC 245
C++ G C C + C TD VCGSD +TY + C L+ AC AQ ++ V+ C
Sbjct: 454 CVVVDGKPKCVCPS--C--TDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSAC 508
Score = 40.7 bits (91), Expect = 8e-04
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +3
Query: 39 CDRMTCYFGAHCLIRSGLATCECSASECPPTDTLPVCGSDSRTYVSTCHLRAHACRAQAD 218
C + C +G C RSG+ C + PP +CG + Y S CHL+ +C+ A
Sbjct: 587 CLHVQCRYGEEC--RSGVCVCSYNCPANPPLSAR-ICGENGVLYPSLCHLQLASCQKGAP 643
Query: 219 V 221
+
Sbjct: 644 I 644
Score = 38.3 bits (85), Expect = 0.004
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +3
Query: 36 NCDRMTCYFGAHCLIR-SGLATC----ECSASECPPTDTLPVCGSDSRTYVSTCHLRAHA 200
+C + C+ GA C+ S C C+ + + VCGSD TY + C L+ A
Sbjct: 839 DCHSLRCFHGAKCVPSPSSFPDCICPQSCNMNHLGIVANMTVCGSDGTTYSNLCELKMFA 898
Query: 201 C 203
C
Sbjct: 899 C 899
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 54.4 bits (125), Expect = 6e-08
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Frame = +3
Query: 39 CDRMTCYFGAHCLIR--SG--LATCECSASECP----PTDTLPVCGSDSRTYVSTCHLRA 194
C+ + C G C++ +G LA C C ++CP ++ PVC S Y S+CHLR
Sbjct: 226 CEDLRCGPGEDCVVNQINGILLAKCVCP-TQCPNYGDSVESSPVCSSHGVDYQSSCHLRH 284
Query: 195 HACRAQADVVVQAFGPC 245
HAC ++ ++ V+ FG C
Sbjct: 285 HACESKTNITVKFFGRC 301
Score = 51.6 bits (118), Expect = 4e-07
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +3
Query: 39 CDRMTCYFGAHCLIRSGLATCECSASECPPTDTLPVCGSDSRTYVSTCHLRAHACRAQAD 218
C++ C FG+ C +++G+ CEC A TD VCGSD +Y S CHL +C +
Sbjct: 153 CEQSLCPFGSKCGLKTGV--CECKARCRVVTDV--VCGSDHVSYSSFCHLSVRSCVLAKN 208
Query: 219 VV---VQAFGPCSNETP 260
V V GPC P
Sbjct: 209 GVRLRVATKGPCKKRNP 225
Score = 51.6 bits (118), Expect = 4e-07
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +3
Query: 36 NCDRMTCYFGAHCLIR-SGLATC----ECSASECPPTDTLPVCGSDSRTYVSTCHLRAHA 200
+C + C+ GA C+ S C C+ + + VCGSD TY + C L+ A
Sbjct: 778 DCHSLRCFHGAKCVPSPSSFPDCICPQSCNMNHLGIVANMTVCGSDGTTYSNLCELKMFA 837
Query: 201 CRAQADVVVQAFGPCSNE 254
C+ Q DVV + G C +E
Sbjct: 838 CKHQIDVVPVSMGICDDE 855
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = +3
Query: 102 ECSASECPPTDTLPVCGSDSRTYVSTCHLRAHACRAQADVVVQAFGPC 245
EC SE ++ VCG+D +TY++ C L+ AC+ Q D++V G C
Sbjct: 324 ECKCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNC 371
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +3
Query: 39 CDRMTCYFGAHCLIRSG-LATCECSASECPPTDTLPVCGSDSRTYVSTCHLRAHACRAQA 215
C++M C F C+++ A CEC + C PVC ++ T+ + C ++ +C ++
Sbjct: 378 CEKMECGFWGSCVVKPDRTAECECP-NRCEDV-MRPVCATNGETFDNECEMKKKSCETKS 435
Query: 216 DVVVQAFGPC 245
+ V+ G C
Sbjct: 436 MIKVKHQGTC 445
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +3
Query: 54 CYFGAHCLI-RSGLATCECSASECPPTDT---LPVCGSDSRTYVSTCHLRAHACRAQADV 221
C F + C++ + A C+C +CP + VCG+D TY S CH++ AC Q+
Sbjct: 526 CDFYSACVVGENEKAECKCP-DDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACH-QSKF 583
Query: 222 VVQAFGPCSNETPHV 266
V+ AF +E HV
Sbjct: 584 VMTAFEGKCDECLHV 598
Score = 40.7 bits (91), Expect = 8e-04
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 72 CLIRSGLATCECSASECPPTDTLP-VCGSDSRTYVSTCHLRAHACRAQADVVVQAFGPC 245
C++ G C C + C TD VCGSD +TY + C L+ AC AQ ++ V+ C
Sbjct: 462 CVVVDGKPKCVCPS--C--TDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSAC 516
Score = 40.7 bits (91), Expect = 8e-04
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +3
Query: 39 CDRMTCYFGAHCLIRSGLATCECSASECPPTDTLPVCGSDSRTYVSTCHLRAHACRAQAD 218
C + C +G C RSG+ C + PP +CG + Y S CHL+ +C+ A
Sbjct: 595 CLHVQCRYGEEC--RSGVCVCSYNCPANPPLSAR-ICGENGVLYPSLCHLQLASCQKGAP 651
Query: 219 V 221
+
Sbjct: 652 I 652
>L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin
protein.
Length = 264
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Frame = +3
Query: 27 PATN-CDRMTCYFGAHCLI-RSGLATCECSASECPPTDTLP---VCGSDSRTYVSTCHLR 191
PA N C+ C +G C++ + G TCEC S+CP D P VC ++++T+ S C L
Sbjct: 48 PAKNPCEDHQCGWGKECVVGKKGEPTCEC-ISKCPELDGDPMDKVCANNNQTFTSLCDLY 106
Query: 192 AHAC 203
C
Sbjct: 107 RERC 110
>AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin
(sparc) related protein1 protein.
Length = 264
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Frame = +3
Query: 27 PATN-CDRMTCYFGAHCLI-RSGLATCECSASECPPTDTLP---VCGSDSRTYVSTCHLR 191
PA N C+ C +G C++ + G TCEC S+CP D P VC ++++T+ S C L
Sbjct: 48 PAKNPCEDHQCGWGKECVVGKKGEPTCEC-ISKCPELDGDPMDKVCANNNQTFTSLCDLY 106
Query: 192 AHAC 203
C
Sbjct: 107 RERC 110
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical protein
F29G6.1 protein.
Length = 1170
Score = 33.1 bits (72), Expect = 0.15
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 105 CSASECPPTDTLPVCGSDSRTYVSTCHLRAHAC 203
C+ + CP T PVC S RT+ S CH C
Sbjct: 1068 CALASCPKTGQ-PVCDSRGRTHDSLCHFHNSKC 1099
Score = 30.7 bits (66), Expect = 0.81
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 105 CSASECPPTDTLPVCGSDSRTYVSTCHLRAHACRAQ 212
C + CP +D PVC S T+ + CH C A+
Sbjct: 813 CCDTNCP-SDFSPVCDSKGSTHQNICHFGVKRCIAE 847
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 117 ECPPTDTLPVCGSDSRTYVSTCHLRAHACRAQADVVVQAFGPCSNE 254
+CP PVCG+D+ TY + C LR R D++ G C ++
Sbjct: 20 DCPSV-IRPVCGTDNVTYNNLCFLRC-VQRTNEDLLFFYNGTCCDK 63
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 96 TCECSASECPPTDTLPVCGSDSRTYVSTCHLRAHAC 203
TC C EC T P+C + T+++ CH C
Sbjct: 59 TC-CDKKECEKVGT-PICDNFGETHINDCHFAQFQC 92
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 105 CSASECPPTDTLPVCGSDSRTYVSTCHLRAHACR 206
CS EC + PVC + +RT+ + C + AC+
Sbjct: 252 CSIKECDKSWD-PVCDTRNRTHKNVCQFKFFACK 284
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 96 TCECSASECPPTDTLPVCGSDSRTYVSTCHLRAHACR-AQADVVVQAFGPC 245
T CS EC + P+CG++ T+ + C L+ C A + + V G C
Sbjct: 765 TFNCSM-ECDNSYD-PLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMC 813
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Frame = +3
Query: 120 CPPT---DTLPVCGSDSRTYVSTCHLRAHAC 203
CP T D PVC + T+ + CH + + C
Sbjct: 371 CPRTCSRDVKPVCDEANNTHQNLCHFQQYNC 401
>Z50756-4|CAA90639.1| 482|Caenorhabditis elegans Hypothetical
protein T08D10.1 protein.
Length = 482
Score = 31.1 bits (67), Expect = 0.61
Identities = 34/143 (23%), Positives = 51/143 (35%), Gaps = 8/143 (5%)
Frame = +3
Query: 27 PATNCDRMTCYFGAHCLIRSGLATCECSASECPPTDTLP---VCGSDSRTYVSTCHLRAH 197
PAT+ + ++RS T + S S+ PT T P S S H +H
Sbjct: 69 PATSSPNVQTQCHQPPVVRS--QTHQASVSQTTPTQTTPSQYTPASVSTARAPQFHRSSH 126
Query: 198 ACRAQADVVVQAFGPC--SNETPHVXXXXXXXXXXXXXXXKNSQAHAPNKTLKDFEHIKY 371
+Q + QAFGP S P + ++PN++ F H
Sbjct: 127 VTPSQQQRIEQAFGPAPVSQSQPQNGSYIQYNEPSTSVASTTTSFYSPNESEPVFTHAIS 186
Query: 372 LSSN---SLQYTDASVDTSDSGK 431
N + Q ++ DSGK
Sbjct: 187 FKPNEPENGQKAREQLELLDSGK 209
>Z50741-5|CAA90612.1| 482|Caenorhabditis elegans Hypothetical
protein T08D10.1 protein.
Length = 482
Score = 31.1 bits (67), Expect = 0.61
Identities = 34/143 (23%), Positives = 51/143 (35%), Gaps = 8/143 (5%)
Frame = +3
Query: 27 PATNCDRMTCYFGAHCLIRSGLATCECSASECPPTDTLP---VCGSDSRTYVSTCHLRAH 197
PAT+ + ++RS T + S S+ PT T P S S H +H
Sbjct: 69 PATSSPNVQTQCHQPPVVRS--QTHQASVSQTTPTQTTPSQYTPASVSTARAPQFHRSSH 126
Query: 198 ACRAQADVVVQAFGPC--SNETPHVXXXXXXXXXXXXXXXKNSQAHAPNKTLKDFEHIKY 371
+Q + QAFGP S P + ++PN++ F H
Sbjct: 127 VTPSQQQRIEQAFGPAPVSQSQPQNGSYIQYNEPSTSVASTTTSFYSPNESEPVFTHAIS 186
Query: 372 LSSN---SLQYTDASVDTSDSGK 431
N + Q ++ DSGK
Sbjct: 187 FKPNEPENGQKAREQLELLDSGK 209
>U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical
protein F47E1.4 protein.
Length = 728
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/51 (29%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = +3
Query: 96 TCECSAS-ECPPTDTLPVCGSDSRTYVSTCHLRAHACRAQADVVVQAFGPC 245
T EC++ C PVC +D Y S CH V F C
Sbjct: 521 TNECNSQCSCENAHLYPVCSADGTAYFSPCHAGCREATQFGSDPVIGFASC 571
>Z74032-1|CAA98465.3| 342|Caenorhabditis elegans Hypothetical
protein F35B12.2 protein.
Length = 342
Score = 29.1 bits (62), Expect = 2.5
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +1
Query: 181 AIFVHTPAGLRPMWWFKHLVHAVTRR 258
AIFV+ P L P WW +++ ++ ++
Sbjct: 302 AIFVYVPLSLLPTWWADYVIRSLGKQ 327
>U58739-1|AAB00607.1| 392|Caenorhabditis elegans Hypothetical
protein F28C10.3 protein.
Length = 392
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 312 KNSQAHAPNKTLKDFEHIKYLSSNS 386
+N + HAP T++DFE +K++ S +
Sbjct: 15 ENGENHAPAATIEDFEILKHIGSGA 39
>Z81540-11|CAB04397.2| 191|Caenorhabditis elegans Hypothetical
protein F46B3.14 protein.
Length = 191
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +3
Query: 24 LPATNCDRMTCYFGAHCLIRSGLATCECSASECPPTDTLPVCGSDSRTYVSTCHL 188
L + C + C G HC + +G C S C P + V SD + V C L
Sbjct: 65 LDSNPCASIKCGRGYHCAVENGQGGCVPSNIPCSPAIKMFV--SDVPSEVDLCSL 117
>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 1 protein.
Length = 2153
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 78 IRSGLATCECSASECPPTDTLPVCGSDSRTYVST 179
I GL+ C CS + C + LP G+ + VST
Sbjct: 2033 IDGGLSGCCCSTNNCVGPNVLPSAGTTQPSTVST 2066
>U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crumbs
homolog protein 1 protein.
Length = 1722
Score = 28.3 bits (60), Expect = 4.3
Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Frame = +3
Query: 21 QLPATNCDRMTCYFGAHCL-IRSGLATCECSAS----EC-PPTDTLPVCGSDSR 164
+L A CDR C G HC+ L TC C S C P D L V GSD +
Sbjct: 280 ELQARPCDREPCLNGGHCVDDGQNLFTCFCLPSFTGIYCGEPVDCL-VNGSDCK 332
>Z81540-10|CAB04398.1| 354|Caenorhabditis elegans Hypothetical
protein F46B3.9 protein.
Length = 354
Score = 27.9 bits (59), Expect = 5.7
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 27 PATNCDRMTCYFGAHCLIRSGLATC 101
P CD +TC G C++ +G + C
Sbjct: 272 PIDACDSITCETGFTCVVENGASVC 296
Score = 27.1 bits (57), Expect = 10.0
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3
Query: 39 CDRMTCYFGAHCLIRSGLATC 101
C+ C G HC ++ G+A+C
Sbjct: 59 CNLRKCPLGYHCSVKDGVASC 79
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +3
Query: 60 FGAHCLIRSGLATCECSASECPPTDTLPVCGSDSRTYVSTCHLRAHAC 203
F H + S C C+A CP T+ PVC +T+ + C C
Sbjct: 106 FKNHISMDSSQEKCSCTAP-CP-TEWNPVCDKKGQTHANFCTFLNSKC 151
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +3
Query: 15 STQLPATNCDRMTCYFGAHCLIRSGL-ATCECSASECPPTDTL 140
STQ P C TC C+ R+ TCEC PT +L
Sbjct: 3133 STQEPNNICANSTCGMNGQCVPRNMTHYTCECKLYYDGPTCSL 3175
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +3
Query: 15 STQLPATNCDRMTCYFGAHCLIRSGL-ATCECSASECPPTDTL 140
STQ P C TC C+ R+ TCEC PT +L
Sbjct: 3133 STQEPNNICANSTCGMNGQCVPRNMTHYTCECKLYYDGPTCSL 3175
>Z81069-1|CAB02990.1| 359|Caenorhabditis elegans Hypothetical
protein F25H9.1 protein.
Length = 359
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 330 APNKTLKDFEHIKYLSSNSLQYTDASVDTSDSGK 431
A NK ++IKY S S ++TD +V+ DSG+
Sbjct: 121 ACNKCKWTIDYIKYDGSLSDKFTDETVNCGDSGE 154
>AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlecan
protein.
Length = 925
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +3
Query: 15 STQLPATNCDRMTCYFGAHCLIRSGL-ATCECSASECPPTDTL 140
STQ P C TC C+ R+ TCEC PT +L
Sbjct: 683 STQEPNNICANSTCGMNGQCVPRNMTHYTCECKLYYDGPTCSL 725
>Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical
protein F56H6.11 protein.
Length = 663
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 232 HLVHAVTRRHTFVEVVAPVDRQAQSPVKIHR 324
+++ A+ R H V +AP+ + PVKI +
Sbjct: 554 YILDAIPRNHNIVSKIAPMLKSGVDPVKIDK 584
>U55854-5|AAA98014.1| 103|Caenorhabditis elegans Hypothetical
protein C04G6.6 protein.
Length = 103
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 312 KNSQAHAPNKTLKDFEHIKYLSSNSLQYTDASVDTSDSGKPDSPEPELTCIDILPPI 482
K + + P K LK+ + + + + ++ + SDSGK E E++ D PP+
Sbjct: 24 KKTASKGPKKELKNPKKKPKKNLKNKKSRNSESEMSDSGKTTDCEMEISDADDYPPV 80
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 39 CDRMTCYFGAHCLIRSGLATCECSASECPPTDTLPVCGS 155
C + C G C +G+A C ECPP T +C S
Sbjct: 261 CSSVPCQNGGVCRSNNGIAYC-----ECPPAFTGLLCES 294
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 39 CDRMTCYFGAHCLIRSGLATCECSASECPPTDTLPVCGS 155
C + C G C +G+A C ECPP T +C S
Sbjct: 261 CSSVPCQNGGVCRSNNGIAYC-----ECPPAFTGLLCES 294
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 39 CDRMTCYFGAHCLIRSGLATCECSASECPPTDTLPVCGS 155
C + C G C +G+A C ECPP T +C S
Sbjct: 261 CSSVPCQNGGVCRSNNGIAYC-----ECPPAFTGLLCES 294
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 39 CDRMTCYFGAHCLIRSGLATCECSASECPPTDTLPVCGS 155
C + C G C +G+A C ECPP T +C S
Sbjct: 261 CSSVPCQNGGVCRSNNGIAYC-----ECPPAFTGLLCES 294
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,254,797
Number of Sequences: 27780
Number of extensions: 279469
Number of successful extensions: 917
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -