Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_I18
(531 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY314006-1|AAP79899.1| 1817|Homo sapiens DEC-205/DCL-1 fusion pr... 32 1.4
AY184222-1|AAN85434.1| 1873|Homo sapiens DEC-205/DCL-1 fusion pr... 32 1.4
AF064827-1|AAC62622.1| 1722|Homo sapiens gp200-MR6 protein. 32 1.4
AF011333-1|AAC17636.1| 1722|Homo sapiens DEC-205 protein. 32 1.4
AC093873-1|AAY24189.1| 806|Homo sapiens unknown protein. 32 1.4
U50929-1|AAC50668.1| 406|Homo sapiens betaine:homocysteine meth... 30 5.8
BC020665-1|AAH20665.1| 363|Homo sapiens betaine-homocysteine me... 30 5.8
BC012616-1|AAH12616.1| 406|Homo sapiens betaine-homocysteine me... 30 5.8
AK000008-1|BAA90880.1| 303|Homo sapiens protein ( Homo sapiens ... 30 5.8
AF257473-1|AAG41356.1| 363|Homo sapiens betaine-homocysteine me... 30 5.8
AF118378-1|AAD22043.1| 406|Homo sapiens betaine-homocysteine me... 30 5.8
>AY314006-1|AAP79899.1| 1817|Homo sapiens DEC-205/DCL-1 fusion
protein variant V33-2 protein.
Length = 1817
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 8 AQDPIPLIVYPNSGEKYNPQIGWIDRDKCEPVEVFIQDWL 127
A DP IV+ N+G+ P GWI D C+ E + W+
Sbjct: 32 ANDPFT-IVHGNTGKCIKPVYGWIVADDCDETEDKLWKWV 70
>AY184222-1|AAN85434.1| 1873|Homo sapiens DEC-205/DCL-1 fusion
protein variant V34-2 protein.
Length = 1873
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 8 AQDPIPLIVYPNSGEKYNPQIGWIDRDKCEPVEVFIQDWL 127
A DP IV+ N+G+ P GWI D C+ E + W+
Sbjct: 32 ANDPFT-IVHGNTGKCIKPVYGWIVADDCDETEDKLWKWV 70
>AF064827-1|AAC62622.1| 1722|Homo sapiens gp200-MR6 protein.
Length = 1722
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 8 AQDPIPLIVYPNSGEKYNPQIGWIDRDKCEPVEVFIQDWL 127
A DP IV+ N+G+ P GWI D C+ E + W+
Sbjct: 32 ANDPFT-IVHGNTGKCIKPVYGWIVADDCDETEDKLWKWV 70
>AF011333-1|AAC17636.1| 1722|Homo sapiens DEC-205 protein.
Length = 1722
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 8 AQDPIPLIVYPNSGEKYNPQIGWIDRDKCEPVEVFIQDWL 127
A DP IV+ N+G+ P GWI D C+ E + W+
Sbjct: 32 ANDPFT-IVHGNTGKCIKPVYGWIVADDCDETEDKLWKWV 70
>AC093873-1|AAY24189.1| 806|Homo sapiens unknown protein.
Length = 806
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 8 AQDPIPLIVYPNSGEKYNPQIGWIDRDKCEPVEVFIQDWL 127
A DP IV+ N+G+ P GWI D C+ E + W+
Sbjct: 32 ANDPFT-IVHGNTGKCIKPVYGWIVADDCDETEDKLWKWV 70
>U50929-1|AAC50668.1| 406|Homo sapiens betaine:homocysteine
methyltransferase protein.
Length = 406
Score = 29.9 bits (64), Expect = 5.8
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +2
Query: 101 VEVFIQDWLDLGVRYVGGCC 160
++ + ++ +LGVRY+GGCC
Sbjct: 281 IQKYAREAYNLGVRYIGGCC 300
>BC020665-1|AAH20665.1| 363|Homo sapiens betaine-homocysteine
methyltransferase 2 protein.
Length = 363
Score = 29.9 bits (64), Expect = 5.8
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +2
Query: 101 VEVFIQDWLDLGVRYVGGCC 160
++ + ++ +LGVRY+GGCC
Sbjct: 272 IQKYAREAYNLGVRYIGGCC 291
>BC012616-1|AAH12616.1| 406|Homo sapiens betaine-homocysteine
methyltransferase protein.
Length = 406
Score = 29.9 bits (64), Expect = 5.8
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +2
Query: 101 VEVFIQDWLDLGVRYVGGCC 160
++ + ++ +LGVRY+GGCC
Sbjct: 281 IQKYAREAYNLGVRYIGGCC 300
>AK000008-1|BAA90880.1| 303|Homo sapiens protein ( Homo sapiens
cDNA FLJ20001 fis, clone ADKA01273. ).
Length = 303
Score = 29.9 bits (64), Expect = 5.8
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +2
Query: 101 VEVFIQDWLDLGVRYVGGCC 160
++ + ++ +LGVRY+GGCC
Sbjct: 212 IQKYAREAYNLGVRYIGGCC 231
>AF257473-1|AAG41356.1| 363|Homo sapiens betaine-homocysteine
methyltransferase 2 protein.
Length = 363
Score = 29.9 bits (64), Expect = 5.8
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +2
Query: 101 VEVFIQDWLDLGVRYVGGCC 160
++ + ++ +LGVRY+GGCC
Sbjct: 272 IQKYAREAYNLGVRYIGGCC 291
>AF118378-1|AAD22043.1| 406|Homo sapiens betaine-homocysteine
methyltransferase protein.
Length = 406
Score = 29.9 bits (64), Expect = 5.8
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +2
Query: 101 VEVFIQDWLDLGVRYVGGCC 160
++ + ++ +LGVRY+GGCC
Sbjct: 281 IQKYAREAYNLGVRYIGGCC 300
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,681,761
Number of Sequences: 237096
Number of extensions: 1617365
Number of successful extensions: 3216
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3216
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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