Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_I17
         (231 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC065003-1|AAH65003.1|  643|Homo sapiens solute carrier family 2...    28   6.1  
AL359091-7|CAI13490.1|  643|Homo sapiens solute carrier family 2...    28   6.1  
AF055899-1|AAD11623.1|  641|Homo sapiens fatty acid transport pr...    28   6.1  

>BC065003-1|AAH65003.1|  643|Homo sapiens solute carrier family 27
           (fatty acid transporter), member 4 protein.
          Length = 643

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 195 VSHSKYYRMLILINYALRYR 136
           V HS+YYRM  L+ Y  R R
Sbjct: 258 VVHSRYYRMAALVYYGFRMR 277


>AL359091-7|CAI13490.1|  643|Homo sapiens solute carrier family 27
           (fatty acid transporter), member 4 protein.
          Length = 643

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 195 VSHSKYYRMLILINYALRYR 136
           V HS+YYRM  L+ Y  R R
Sbjct: 258 VVHSRYYRMAALVYYGFRMR 277


>AF055899-1|AAD11623.1|  641|Homo sapiens fatty acid transport
           protein protein.
          Length = 641

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 195 VSHSKYYRMLILINYALRYR 136
           V HS+YYRM  L+ Y  R R
Sbjct: 258 VVHSRYYRMAALVYYGFRMR 277


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,685,941
Number of Sequences: 237096
Number of extensions: 535136
Number of successful extensions: 805
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 76,859,062
effective HSP length: 55
effective length of database: 63,818,782
effective search space used: 1340194422
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)