Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_I17
         (231 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    21   1.5  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   1.5  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    20   4.6  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              19   6.1  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    19   6.1  

>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 21.4 bits (43), Expect = 1.5
 Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
 Frame = +3

Query: 57  IQLSRCNFFF*QMLCM---YISCNSFLKCFC 140
           I + RC FFF  ++ +   +++    +KC C
Sbjct: 2   ISMLRCTFFFLSVILITSYFVTPTMSIKCNC 32


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 1.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 114 MKCTYITFVKKKNC 73
           +KC+ + F + KNC
Sbjct: 82  LKCSLVEFSENKNC 95


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 19.8 bits (39), Expect = 4.6
 Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = -1

Query: 162 LINYALR-YRNTSRKNCMKCTYITFVKKKNCISITGFSH 49
           ++N  L+ + N  +  C  CTY T       + +  +SH
Sbjct: 31  MLNSHLKSHSNVYQYRCANCTYATKYCHSLKLHLRKYSH 69


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 19.4 bits (38), Expect = 6.1
 Identities = 5/17 (29%), Positives = 12/17 (70%)
 Frame = +2

Query: 92  NVMYVHFMQFFLEVFLY 142
           ++M++H +   L +F+Y
Sbjct: 6   SIMFIHSIFLILIIFIY 22


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 19.4 bits (38), Expect = 6.1
 Identities = 5/17 (29%), Positives = 12/17 (70%)
 Frame = +2

Query: 92  NVMYVHFMQFFLEVFLY 142
           ++M++H +   L +F+Y
Sbjct: 6   SIMFIHSIFLILIIFIY 22


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,079
Number of Sequences: 438
Number of extensions: 1187
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3785850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)