Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_I11
         (438 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023883-1|ABA81817.1|  245|Drosophila melanogaster RE60324p pro...    43   2e-04
AE013599-1308|AAF58643.2|  245|Drosophila melanogaster CG9023-PB...    43   2e-04
AE013599-1307|AAM68740.2|  245|Drosophila melanogaster CG9023-PA...    43   2e-04
BT016032-1|AAV36917.1|  798|Drosophila melanogaster RE04643p pro...    28   6.4  
AE014296-2988|AAF49283.1|  798|Drosophila melanogaster CG5290-PA...    28   6.4  

>BT023883-1|ABA81817.1|  245|Drosophila melanogaster RE60324p
           protein.
          Length = 245

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
 Frame = +3

Query: 333 MQKKT--SSIIGLSDVTDNKLIWRQLIAELAGTFLL 434
           M +KT  S  +G++D+T+NK IWR L+ EL GTF L
Sbjct: 1   MVEKTEMSKFVGVADITENKKIWRMLLGELVGTFFL 36


>AE013599-1308|AAF58643.2|  245|Drosophila melanogaster CG9023-PB,
           isoform B protein.
          Length = 245

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
 Frame = +3

Query: 333 MQKKT--SSIIGLSDVTDNKLIWRQLIAELAGTFLL 434
           M +KT  S  +G++D+T+NK IWR L+ EL GTF L
Sbjct: 1   MVEKTEMSKFVGVADITENKKIWRMLLGELVGTFFL 36


>AE013599-1307|AAM68740.2|  245|Drosophila melanogaster CG9023-PA,
           isoform A protein.
          Length = 245

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
 Frame = +3

Query: 333 MQKKT--SSIIGLSDVTDNKLIWRQLIAELAGTFLL 434
           M +KT  S  +G++D+T+NK IWR L+ EL GTF L
Sbjct: 1   MVEKTEMSKFVGVADITENKKIWRMLLGELVGTFFL 36


>BT016032-1|AAV36917.1|  798|Drosophila melanogaster RE04643p
           protein.
          Length = 798

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -2

Query: 344 LLLHLIHGVIRFHREQIATKKNHSTTRHESESLSV 240
           LLL L +G ++FHR +IA++      +H    L V
Sbjct: 196 LLLELANGYLQFHRSEIASQILDELCKHLQVELKV 230


>AE014296-2988|AAF49283.1|  798|Drosophila melanogaster CG5290-PA
           protein.
          Length = 798

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -2

Query: 344 LLLHLIHGVIRFHREQIATKKNHSTTRHESESLSV 240
           LLL L +G ++FHR +IA++      +H    L V
Sbjct: 196 LLLELANGYLQFHRSEIASQILDELCKHLQVELKV 230


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,472,135
Number of Sequences: 53049
Number of extensions: 340719
Number of successful extensions: 843
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1396986582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)